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"""
Qcat setup script
Copyright (c) 2018 by Oxford Nanopore Technologies Ltd.
"""
from setuptools import setup
from qcat import __version__
setup(
name='qcat',
version=__version__,
url='https://github.com/nanoporetech/qcat/',
license='Mozilla Public License Version 2.0',
description="Qcat is Python command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files",
author='Oxford Nanopore Technologies Ltd.',
author_email='philipp.rescheneder@nanoporetech.com',
install_requires=[
'biopython',
'parasail',
'pyyaml'
],
extras_require={
'DOCS': ['sphinx>=1.3.1'],
},
tests_require=[
'pytest-runner',
'pytest',
'pytest-cov',
],
packages=[
'qcat',
'qcat.test'
],
package_data={
'qcat': [
'resources/kits/*',
],
'qcat.test': [
'data/*.fastq',
]
},
entry_points={"console_scripts": ['qcat = qcat.cli:main',
'qcat-eval = qcat.eval:main',
'qcat-roc = qcat.eval_roc:main',
'qcat-eval-truth = qcat.eval_full:main']}
)
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