1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
|
#!/usr/bin/make -f
# DH_VERBOSE := 1
%:
dh $@ --with python3 # --buildsystem=pybuild
override_dh_install:
adapter_path=/usr/share/trimmomatic
cat /usr/share/trimmomatic/* > config/adapters.fa
sed -i.bak "s#ADAPTER_PATH = \"\"#ADAPTER_PATH = \"${adapter_path}\"#g" QCumber-2
dh_install
override_dh_compress:
dh_compress --exclude=.pdf
override_dh_fixperms:
dh_fixperms
# main script should be executable
chmod a-x debian/*/usr/share/*/*.tex
chmod a-x debian/*/etc/*/*.txt
chmod a-x debian/*/usr/share/*/*.html
chmod a-x debian/*/usr/share/*/*.py
chmod a-x debian/*/usr/share/*/Rscripts/*.R
chmod a-x debian/*/usr/share/*/modules/*.snakefile
chmod a-x debian/*/etc/qcumber/adapters.fa
|
