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/* $Id: qextract.c,v 1.9 2006/02/20 09:45:24 yjung Exp $
*
* This file is part of the ESO QFITS Library
* Copyright (C) 2001-2004 European Southern Observatory
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 2 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program; if not, write to the Free Software
* Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
*/
/*
* $Author: yjung $
* $Date: 2006/02/20 09:45:24 $
* $Revision: 1.9 $
* $Name: qfits-6_2_0 $
*/
/*-----------------------------------------------------------------------------
Includes
-----------------------------------------------------------------------------*/
#include "qfits_table.h"
#include "qfits_image.h"
#include "qfits_rw.h"
/*-----------------------------------------------------------------------------
Function prototypes
-----------------------------------------------------------------------------*/
static int textract_write_ext(char *, int) ;
static int iextract_write_ext(char *, int) ;
static char prog_desc[] = "Extract and write FITS extensions" ;
static void usage(char *) ;
/*-----------------------------------------------------------------------------
Main
-----------------------------------------------------------------------------*/
int main(int argc, char *argv[])
{
char * name_in ;
int ext ;
int nb_ext ;
int ext_type ;
if (argc<3) usage(argv[0]) ;
/* Get input file name and extension number */
name_in = strdup(argv[1]) ;
ext = (int)atoi(argv[2]) ;
/* Check if the file is a FITS file */
if (!qfits_is_fits(name_in)) {
printf("[%s] is not a FITS file\n", name_in) ;
free(name_in) ;
return -1 ;
}
/* Check if the extension is valid */
nb_ext = qfits_query_n_ext(name_in) ;
if (nb_ext < ext) {
printf("Only %d extensions in this file\n", nb_ext) ;
free(name_in) ;
return -1 ;
}
/* Check if it's a table or an image */
ext_type = qfits_is_table(name_in, ext) ;
switch (ext_type) {
case QFITS_BINTABLE:
case QFITS_ASCIITABLE:
if (textract_write_ext(name_in, ext) == -1) {
printf("cannot read-write extension no %d\n", ext) ;
free(name_in) ;
return -1 ;
}
break ;
case QFITS_INVALIDTABLE:
if (iextract_write_ext(name_in, ext) == -1) {
printf("cannot read-write extension no %d\n", ext) ;
free(name_in) ;
return -1 ;
}
break ;
default:
printf("Unrecognized FITS type\n") ;
free(name_in) ;
return -1 ;
}
free(name_in) ;
return 0 ;
}
/*-----------------------------------------------------------------------------
Functions code
-----------------------------------------------------------------------------*/
static void usage(char * pname)
{
printf("%s : %s\n", pname, prog_desc) ;
printf(
"use : %s <in> <extension>\n"
"\n", pname) ;
exit(0) ;
}
static int textract_write_ext(
char * in,
int ext)
{
qfits_table * th ;
void ** array ;
qfits_header * fh ;
int array_size ;
int i ;
/* Get the table infos */
if ((th = qfits_table_open(in, ext)) == NULL) {
printf("cannot read extension: %d\n", ext) ;
return -1 ;
}
/* Compute array_size */
array_size = 0 ;
for (i=0 ; i<th->nc ; i++) {
switch (th->col[i].atom_type) {
case TFITS_ASCII_TYPE_A:
case TFITS_ASCII_TYPE_I:
case TFITS_ASCII_TYPE_E:
case TFITS_ASCII_TYPE_F:
case TFITS_ASCII_TYPE_D:
case TFITS_BIN_TYPE_A:
case TFITS_BIN_TYPE_L:
case TFITS_BIN_TYPE_B:
case TFITS_BIN_TYPE_X:
array_size += sizeof(char*) ;
break ;
case TFITS_BIN_TYPE_I:
array_size += sizeof(short*) ;
break ;
case TFITS_BIN_TYPE_J:
case TFITS_BIN_TYPE_E:
array_size += sizeof(int*) ;
break ;
case TFITS_BIN_TYPE_C:
case TFITS_BIN_TYPE_P:
array_size += sizeof(float*) ;
break ;
case TFITS_BIN_TYPE_D:
case TFITS_BIN_TYPE_M:
array_size += sizeof(double*) ;
break ;
default:
return -1 ;
}
}
/* Allocate memory for array */
array = malloc(array_size) ;
/* Load columns in array */
for (i=0 ; i<th->nc ; i++) {
array[i] = qfits_query_column_data(th, i, NULL, NULL) ;
if (array[i] == NULL) {
printf("cannot read column %d\n", i+1) ;
}
}
/* Update th : filename */
sprintf(th->filename, "ext%d.tfits", ext) ;
/* Get fits primary header */
if ((fh = qfits_header_read(in)) == NULL) {
for (i=0 ; i<th->nc ; i++) if (array[i] != NULL) free(array[i]) ;
qfits_table_close(th) ;
free(array) ;
printf("cannot read fits header\n") ;
return -1 ;
}
if (ext != 0) {
/* No data in primary HDU */
qfits_header_mod(fh, "NAXIS", "0", NULL) ;
qfits_header_del(fh, "NAXIS1") ;
qfits_header_del(fh, "NAXIS2") ;
}
/* Write the tfits file */
if (qfits_save_table_hdrdump((const void **)array, th, fh) == -1) {
qfits_header_destroy(fh) ;
for (i=0 ; i<th->nc ; i++) if (array[i] != NULL) free(array[i]) ;
qfits_table_close(th) ;
free(array) ;
printf("cannot write fits table\n") ;
return -1 ;
}
/* Free and return */
qfits_header_destroy(fh) ;
for (i=0 ; i<th->nc ; i++) if (array[i] != NULL) free(array[i]) ;
qfits_table_close(th) ;
free(array) ;
return 0 ;
}
static int iextract_write_ext(
char * in,
int ext)
{
qfitsloader ql ;
qfitsdumper qd ;
qfits_header * fh ;
char outname[1024] ;
FILE * out ;
sprintf(outname, "ext%d.fits", ext) ;
/* Initialize a FITS loader */
ql.filename = in ;
ql.xtnum = ext ;
ql.pnum = 0 ;
ql.map = 1 ;
ql.ptype = PTYPE_DOUBLE ;
if (qfitsloader_init(&ql)!=0) return -1 ;
/* Load the primary header */
if ((fh = qfits_header_read(ql.filename)) == NULL) return -1 ;
if (ext != 0) {
/* No data in primary HDU */
qfits_header_mod(fh, "NAXIS", "0", NULL) ;
qfits_header_del(fh, "NAXIS1") ;
qfits_header_del(fh, "NAXIS2") ;
}
/* Dump the primary header */
if ((out = fopen(outname, "w")) == NULL) return -1 ;
qfits_header_dump(fh, out);
qfits_header_destroy(fh) ;
if (ext != 0) {
/* Load the extension header */
if ((fh = qfits_header_readext(ql.filename, ext)) == NULL) return -1 ;
/* Dump the extension header */
qfits_header_dump(fh, out);
qfits_header_destroy(fh) ;
}
fclose(out) ;
/* Load the FITS image */
if (qfits_loadpix(&ql)!=0) return -1 ;
/* Write the FITS image */
qd.filename = outname ;
qd.npix = ql.lx * ql.ly ;
qd.ptype = PTYPE_DOUBLE ;
qd.dbuf = ql.dbuf ;
qd.out_ptype = ql.bitpix ;
if (qfits_pixdump(&qd)!=0) return -1 ;
/* qfits_zeropad(outname) ; */
free(ql.dbuf) ;
return 0 ;
}
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