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.PHONY: all lint test install dev clean distclean
PYTHON ?= python
PREFIX ?= $(CONDA_PREFIX)
all: ;
lint:
q2lint
flake8
test: all
QIIMETEST= pytest --doctest-modules
# for parallel, pip install pytest-xdist
mystery-stew: all
MYSTERY_STEW= pytest qiime2/tests/mystery_stew.py -n auto
install: all
$(PYTHON) setup.py install && \
mkdir -p $(PREFIX)/etc/conda/activate.d && \
cp hooks/00_activate_qiime2_envs.sh $(PREFIX)/etc/conda/activate.d/ && \
mkdir -p $(PREFIX)/etc/conda/deactivate.d && \
cp hooks/00_deactivate_qiime2_envs.sh $(PREFIX)/etc/conda/deactivate.d/
dev: all
pip install -e .
clean: distclean
distclean: ;
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