1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630 631 632 633 634 635 636 637 638 639 640 641 642 643 644 645 646 647 648 649 650 651 652 653 654 655 656 657 658 659 660 661 662 663 664 665 666 667 668 669 670 671 672 673 674 675 676 677 678 679 680 681 682 683 684 685 686 687 688 689 690 691 692 693 694 695 696 697 698 699 700 701 702 703 704 705 706 707 708 709 710 711 712 713 714 715 716 717 718 719 720 721 722 723 724 725 726 727 728 729 730 731 732 733 734 735 736 737 738 739 740 741 742 743 744 745 746 747 748 749 750 751 752 753 754 755 756 757 758 759 760 761 762 763 764 765 766 767 768 769 770 771 772 773 774 775 776 777 778 779 780 781 782 783 784 785 786 787 788 789 790 791 792 793 794 795 796 797 798 799 800 801 802 803 804 805 806 807 808 809 810 811 812 813 814 815 816 817 818 819 820 821 822 823 824 825 826 827 828 829 830 831 832 833 834 835 836 837 838 839 840 841 842 843 844 845 846 847 848 849 850 851 852 853 854 855 856 857 858 859 860 861 862 863 864 865 866 867 868 869 870 871 872 873 874 875 876 877 878 879 880 881 882 883 884 885 886 887 888 889 890 891 892 893 894 895 896 897 898 899 900 901 902 903 904 905 906 907 908 909 910 911 912 913 914 915 916 917 918 919 920 921 922 923 924 925 926 927 928 929 930 931 932 933 934 935 936 937 938 939 940 941 942 943 944 945 946 947 948 949 950 951 952 953 954 955 956 957 958 959 960 961 962 963 964 965 966 967 968 969 970 971 972 973 974 975 976 977 978 979 980 981 982 983 984 985 986 987 988 989 990 991 992 993 994 995 996 997 998 999 1000 1001 1002 1003 1004 1005 1006 1007 1008 1009 1010 1011 1012 1013 1014 1015 1016 1017 1018 1019 1020 1021 1022 1023 1024 1025 1026 1027 1028 1029 1030 1031 1032 1033 1034 1035 1036 1037 1038 1039 1040 1041 1042 1043 1044 1045 1046 1047 1048 1049 1050 1051 1052 1053 1054 1055 1056
|
\input texinfo @c -*-texinfo-*-
@comment
@comment Documentation for GNU Queue
@comment Copryight 1998, 1999 W. G. Krebs. All Rights Reserved.
@comment This file is part of the GNU Queue distribution.
@comment Queue is free software; you can redistribute it and/or modify
@comment it under the terms of the GNU General Public License as published by
@comment the Free Software Foundation; either version 2, or (at your option)
@comment any later version.
@comment Queue is distributed in the hope that it will be useful,
@comment but WITHOUT ANY WARRANTY; without even the implied warranty of
@comment MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
@comment GNU General Public License for more details.
@comment You should have received a copy of the GNU General Public License
@comment along with Queue; see the file COPYING. If not, write to
@comment the Free Software Foundation, 675 Mass Ave, Cambridge, MA 02139, USA.
@include QueueVN.texi
@c %**start of header
@setfilename queue.info
@settitle GNU Queue
@setchapternewpage odd
@c %**end of header
@syncodeindex ky cp
@syncodeindex pg cp
@syncodeindex fn cp
@syncodeindex vr cp
@ifinfo
This file documents the GNU Queue load-balancing/batch-processing
environment and rsh replacement.
Copyright 1998-2000 W. G. Krebs <wkrebs@@gnu.org>
Permission is granted to make and distribute verbatim copies of
this manual provided the copyright notice and this permission notice
are preserved on all copies.
@ignore
Permission is granted to process this file through Tex and print the
results, provided the printed document carries copying permission
notice identical to this one except for the removal of this paragraph
(this paragraph not being relevant to the printed manual).
@end ignore
Permission is granted to copy and distribute modified versions of this
manual under the conditions for verbatim copying, provided also that the
section entitled ``GNU General Public License'' is included exactly as
in the original, and provided that the entire resulting derived work is
distributed under the terms of a permission notice identical to this one.
Permission is granted to copy and distribute translations of this manual
into another language, under the above conditions for modified versions,
except that the section entitled ``GNU General Public License'' and
this permission notice may be included in translations approved by the
Free Software Foundation instead of in the original English.
@code{SAS}, @code{Splus}, @code{matlab}, @code{AFS} and other non-FSF software
and terms mentioned in this manual may be trademarks of other organizations.
@end ifinfo
@comment The titlepage section does not appear in the Info file.
@include QueueVN.texi
@titlepage
@title GNU Queue
@subtitle Load-balancing/batch-processing environment
@subtitle and local rsh replacement
@subtitle @today
@subtitle Version @value{QUEUEVN}
@author W. G. Krebs
@c The following two commands
@c start the copyright page.
@page
@vskip 0pt plus 1filll
Copyright @copyright{} 1998-2000 W. G. Krebs
Permission is granted to make and distribute verbatim copies of
this manual provided the copyright notice and this permission notice
are preserved on all copies.
Permission is granted to copy and distribute modified versions of this
manual under the conditions for verbatim copying, provided also that the
section entitled ``GNU General Public License'' is included exactly as
in the original, and provided that the entire resulting derived work is
distributed under the terms of a permission notice identical to this one.
Permission is granted to copy and distribute translations of this manual
into another language, under the above conditions for modified versions,
except that the section entitled ``GNU General Public License'' and
this permission notice may be included in translations approved by the
Free Software Foundation instead of in the original English.
@code{SAS}, @code{Splus}, @code{matlab}, @code{AFS} and other non-FSF software
and terms mentioned in this manual may be trademarks of other organizations.
@end titlepage
@comment ================================================================
@comment The real text starts here
@comment ================================================================
@dircategory Queue load-balancing/batch-processing system
@direntry
* Queue: (queue). The Queue system version @value{QUEUEVN}
* Options: (queue). Options to queue.
* MPI: (queue). Rsh-compatibility hooks for external software.
@end direntry
@node Top,Introduction, , (dir)
@ifinfo
This info manual describes how to use and administer GNU Queue Version @value{QUEUEVN}
@end ifinfo
@menu
* Introduction:: What is GNU Queue?
* Install By Ordinary User:: Installing Queue if you are _not_ the system administrator.
* Install By Root:: Installing Queue if you _are_ the system administrator (preferred method).
* Cluster-Wide:: Getting Queue up and running cluster-wide as system administrator.
* Running Queue:: Queue's options explained
* Profile:: Configuring a job queue's profile file
* MPI:: Using MPI and PVM with GNU Queue
* Security:: Security Issues
* Feedback and Getting Help:: Websites, mailing lists, and bug report addresses
* Copying:: Your rights and freedoms.
* Index:: Index
@end menu
@node Introduction,Install By Ordinary User,Top,Top
@comment node-name, next, previous, up
@chapter Introduction
@cindex Preface
@cindex Overview
@cindex Introduction
@pindex Matlab
@pindex EMACS
GNU Queue is a UNIX process network
load-balancing system that features an innovative proxy process
mechanism which allows users to control their remote jobs in a nearly
seamless and transparent fashion. When an interactive remote job is
launched, such as say Matlab, or EMACS interfacing Allegro Lisp, a
proxy process runs on the local end. (You can think of this being
equivalent to a running `telnet' or `rsh' process, but more intelligent.)
By sending signals to the local
proxy - including hitting the suspend key - the process on the remote
end may be controlled. Resuming the proxy process resumes the remote job. The
user's environment is almost completely replicated, including not only
environmental variables, but nice values, rlimits, terminal settings
@cindex MIT_MAGIC_COOKIE_1
are all replicated on the remote end. Together with @code{MIT_MAGIC_COOKIE_1}
@pindex xhost
(or @code{xhost +}) the system is X-windows transparent as well,
@vindex DISPLAY
provided the users local @code{DISPLAY} variable is set to the fully
qualified pathname of the local machine.
One of the most appealing features of the proxy process system even with
experienced users is that asynchronous job control of remote jobs by
the shell is possible and intuitive. One simply runs the stub in the
background under the local shell; the shell notifies the user when the
remote job has a change in status by monitoring the stub daemon.
When the remote process has terminated, the proxy process returns the exit
value to the shell; otherwise, the stub simulates a death by the same
signal as that which terminated or suspended the remote job. In this
way, control of the remote process is intuitive even to novice users,
as it is just like controlling a local job from the shell. Many of my
original users had to be reminded that their jobs were, in fact,
running remotely.
In addition, Queue also features a more traditional distributed batch
processing environment, with results returned to the user via
email. In addition, traditional batch processing limitations may be
placed on jobs running in either environment (stub or with the email
mechanism) such as suspension of jobs if the system exceeds a certain
load average, limits on CPU time, disk free requirements, limits on
the times in which jobs may run, etc. (These are documented in the
sample @code{profile} file included.)
Queue may be installed by any user on the system; root privileges are
not required.
@node Install By Ordinary User,Install By Root,Introduction,Top
@chapter Installing Queue as an Ordinary User
@cindex install, ordinary user
Installing GNU Queue as an ordinary user is recommended only if you
@cindex root
@cindex superuser
@cindex system administrative privileges
lack root (aka, superuser or Unix system administrative privileges)
on your cluster.
@cindex installation, privileges required
You do not need to have system administrative privileges to install GNU Queue.
@cindex installation, preferred privileges
However, To allow all users in the cluster to use GNU Queue you should
have your cluster's system administrator install Queue following the
instructions in the chapter Install By Root. @xref{Install By Root}.
However, if this is impractical, you may install Queue yourself
without resorting to administrative superuser, or root, privileges by
following the instructions in this chapter.
@cindex network port numbers
@cindex multiple installations per cluster
@cindex port numbers, network
@cindex port numbers, TCP/IP
@cindex TCP/IP, port numbers
Note that, under its default configuration, GNU Queue supports only one installation per
cluster, so if you install GNU Queue as an ordinary user you will be
the only user able to run jobs through it. This can be overcome if another
user edits GNU Queue's header files to change its network port numbers to
avoid a conflict with another copy of GNU Queue running on the same cluster.
@xref{Security for OUsers}, on @code{-DHAVE_IDENTD} and
running an RFC 931 @code{identd} service on cluster when installating GNU Queue as an ordinary user.
@cindex installation by ordinary user, NFS directory permissions
@cindex installation by ordinary user, home directory
@cindex NFS directory permissions, installation by ordinary user
@cindex home directory, installation by ordinary user
To do this, you will need write access to an NFS directory that
is shared among all hosts in your cluster. In most cases, your
system administrator will have set up your home directory this way.
Installing GNU Queue for one user:
@enumerate
@pindex configure
@cindex configure, options, installation by ordinary user
@item
Run @code{./configure} .
When installing as an ordinary user, configure sets the makefile to install GNU Queue into the
current directory. @code{queue} will go in @code{./bin}, @code{queued} daemon will go into @code{./sbin}, @code{/com/queue}
will be the shared spool directory, the host access control list file will go into
@code{./share} and the queued pid files will go into @code{./var} . If you want things to go somewhere else,
run @code{./configure --prefix=dir}, where dir is the top-level directory where you want things to be installed.
@code{./configure} takes a number of additional options that you may wish to be aware of, @code{./configure --help} gives
a full listing of them. @code{--bindir} specifies where @code{queue} goes, @code{--sbindir} specifies where @code{queued} goes,
@code{--sharedstatedir} where the spool directory goes, @code{--datadir} where the host access control file goes,
and @code{--localstatefile} where the @code{queued} pid files go.
If @code{./configure} fails inelegantly, make sure @code{lex} is installed. GNU @code{flex}
is an implementation of lex available from the FSF, @code{http://www.gnu.org}.
@item
Now run @code{make} to compile the programs.
@item
If all goes well, @code{make install} will install the programs into directory you specified with @code{./configure}. Missing
directories will be created.
The name of the localhost @code{make install} is being run on will be added to the host access control list if it is not
already there.
@item
Try running Queue.
Start up ./queued on the localmachine. (If you did a @code{make install} on the localhost the localhost should already
be in the host access control list file.)
@code{./queue --help} gives a list of options to Queue.
Here are some simple examples:
@example
> queue -i -w -n -- hostname
> queue -i -r -n -- hostname
@end example
Here is a more sophisticated example. Try suspending and resuming it with Control-Z and 'fg':
@example
> queue -i -w -p -- emacs -nw
@end example
If this example works on the localhost, you want want to add additional hosts to the host
access control list in @code{share} (or @code{--datadir}) and start up queued on these.
@example
> queue -i -w -p -h hostname -- emacs -nw
@end example
will run emacs on @code{hostname}. Without the @code{-h} argument, it will run the job on the
@code{best} or @code{least-loaded} host in the ACL. @xref{Profile}, for details on how
host selection is made.
@end enumerate
You can also create additional queues for use with the @code{-q} and @code{-d} commands,
as outlined for root users below. Each spooldir must have a @code{profile} file
associated with it. @xref{Profile}, for details.
@node Install By Root,Cluster-Wide,Install By Ordinary User,Top
@chapter Installation of GNU Queue by System Administrator (Preferred)
@cindex installation, preferred method
@cindex installation by system administrator
@cindex installation as root
@cindex installation by system administrator, NFS directory setup
If you want to just experiment with Queue on a single host, all you
need is a local directory that is protected to be root-accessible only.
For load-balancing, however,
you will need an NFS directory mounted on all your hosts with
'no_root_squash' (see NFS man pages) option turned on. Unfortunately,
the 'no_root_squash' option is required for load-balancing
because the file system is
used to communicate information about jobs to be run. The default
spool directory is under the default GNU sharedstatedir, @code{/usr/local/com/queue}.
no_root_squash option is the GNU/Linux name. The option is named differently
under different platforms, see your NFS man pages for the name of the option
that prevents root mapping to nobody on client requests.
Installing GNU Queue for cluster-wide usage
@enumerate
@pindex configure
@cindex configure, options, installation by ordinary user
@item
Since non-administrators are generally less sophisticated than system administrators, the
default @code{./configure} option is to install GNU Queue in the local directory for use by
a single user only.
System administrators need to specify @code{--enable-root} to reconfigure GNU to run with root
privileges. This turns off some options, for example, privileged ports are used instead of
relying on the @code{identd} (RFC 931) service if it is installed. @xref{Security},
for a discussion of security issues
Run @code{./configure --enable-root} .
When installing with the @code{--enable-root} option, configure sets the Makefile to install GNU Queue under
the @code{/usr/local} prefix. @code{queue} will go in @code{/usr/local/bin}, @code{queued} daemon will go into @code{/usr/local/sbin},
@code{/usr/local/com/queue} will be the shared spool directory, the host access control list file will go into
@code{/usr/local/share} and the queued pid files will go into @code{/usr/local/var} . If you want things to go somewhere else,
run @code{./configure --enable-root --prefix=dir}, where dir is the top-level directory where you want things to be installed.
@code{./configure --enable-root} takes a number of additional options that you may wish to be aware of, @code{./configure --help} gives
a full listing of them. @code{--bindir} specifies where @code{queue} goes, @code{--sbindir} specifies where @code{queued} goes,
@code{--sharedstatedir} where the spool directory goes, @code{--datadir} where the host access control file goes,
and @code{--localstatefile} where the queued pid files go.
If @code{./configure} fails inelegantly, make sure lex is installed. GNU Flex
is an implementation of lex available from the FSF, http://www.gnu.org.
@item
Now run @code{make} to compile the programs.
@item
If all goes well, @code{make install} will install the programs into directory you specified with @code{./configure}. Missing
directories will be created.
The name of the localhost @code{make install} is being run on will be added to the host access control list if it is not
already there.
@item
Try running Queue.
Start up ./queued on the localmachine. (If you did a @code{make install} on the localhost the localhost should already
be in the host access control list file.)
@code{./queue --help} gives a list of options to Queue.
Here are some simple examples:
@example
> queue -i -w -n -- hostname
> queue -i -r -n -- hostname
@end example
Here is a more sophisticated example. Try suspending and resuming it with Control-Z and 'fg':
@example
> queue -i -w -p -- emacs -nw
@end example
If this example works on the localhost, you want want to add additional hosts to the host
access control list in @code{share} (or --datadir) and start up queued on these.
@example
> queue -i -w -p -h hostname -- emacs -nw
@end example
will run emacs on @code{hostname}. Without the @code{-h} argument, it will run the job on the
``best'' or ``least-loaded'' host in the ACL. See Profile for details on how
host selection is made. @xref{Profile}.
@end enumerate
You can also create additional queues for use with the @code{-q} and @code{-d} commands,
as outlined for users below. Each spooldir must have a @code{profile} file
associated with it. @xref{Profile}, for details.
@node Cluster-Wide,Running Queue,Install By Root,Top
@chapter Setting Up Queue for Cluster-wide Usage
@cindex Cluster-wide usage, setting up
@pindex queued
@pindex queue
The GNU Queue system consists of two components, `queued' which runs
as a daemon on every host in the cluster, and `queue'
is a user program that allows users to submit jobs to the system.
The 'queue' binary contacts queued to learn the relative virtual load
averages (explained in 'profile') on each host, and specifies one on
which to run the job. Queued then forks off a process
and works together with queue on the local end to control the remote job.
@cindex profile file
Look over the sample 'profile' file, @xref{Profile}, to learn how to customize batch
queues and load balancing. 'profile' has many options. Among others,
you can configure certain hosts to be submit-only hosts for all or
only certain job classes by turning off job execution in these queues.
@cindex QHOSTSFILE
@cindex Access control list, host
@cindex Host access control list
Add the name of each host in the cluster to the access control list. The default
location for this is either @code{share/qhostsfile} or @code{/usr/local/share/qhostsfile}
depending on how @code{./configure} was invoked.
Finally, if you are installing GNU Queue cluster-wide,
make sure the spool directory (default is @code{/usr/local/com/queue})
is NFS exported root-writable on all systems in
your cluster. In GNU/Linux, this is done by setting the
@code{no_root_squash} option in @code{/etc/exports} (and then running @code{/usr/etc/exportfs}
to cause the system to acknowlege the changes; if /usr/etc/exportfs is
not available on your system, restart @code{nfsd} and the @code{portmapper}.)
Other operating system flavors have different names for this option. Read @code{nfs(4)},
@code{exports(4)} and other @code{man} pages for information on setting the
@code{no_root_squash} equivalent on your operating system flavor.
@node Running Queue,Profile,Cluster-Wide,Top
@chapter Running @code{queue}
@cindex options, command line, @code{queue}
@cindex command line options, @code{queue}
@cindex @code{queue}, command line options
@example
queue [-h hostname|-H hostname] [-i|-q] [-d spooldir]
[-o|-p|-n] [-w|-r] -- command.options
@end example
@pindex qsh
@cindex @code{qsh}, command line options
@example
qsh [-l ignored] [-d spooldir] [-o|-p|-n]
[-w|-r] hostname command command.options
@end example
@ftable @kbd
@item -h hostname
@itemx --host hostname
force queue to run on hostname.
@item -H hostname
@itemx --robust-host hostname
Run job on hostname if it is up.
@item -i|-q
@itemx --immediate|--queue
Shorthand for the (@code{now} spooldir) and queue (@code{queue} spooldir).
@item [-d spooldir]
@itemx [--spooldir spooldir]
With @code{-q} option, specifies the name of the batch processing directory, e.g., @code{matlab}
@item -o|-p|-n
@itemx --half-pty|--full-pty|--no-pty
Toggle between half-pty emulation, full-pty emulation (default), and the more efficient no-pty emulation.
@item -w|-r
@itemx --wait|--batch
Toggle between wait (stub daemon; default) and return (mail batch) mode.
@item -v
@itemx --version
Version
@item --help
List of options
@end ftable
@pindex rsh
@cindex @code{qsh} defaults
The defaults for @code{qsh} are a slightly different: no-pty emulation is the default, and a hostname argument is
required. A plus (@code{+}) is the wildcard hostname; specifying @code{+} in place of a valid hostname is the
same as not using an @code{-h} or @code{-H} option with @code{queue}. @code{qsh} is envisioned
as a @code{rsh} compatibility mode for use with software that expects a @code{rsh}-like syntax.
This is useful with some MPI implementations; @xref{MPI}.
@cindex Running Queue
Start the Queue system on every system in
your cluster (as you defined in queue.h) by running @code{queued} or
@code{queued -D &} from the directory in which queued is
installed.
The later invocation places queued in debug
mode, with copious error messages and mailings, which is probably a
good idea if you are having problems. Sending queued a @code{kill -HUP} will
force it to re-read the profile files and ACL lists, which is good when you wish to
shut down a queue or add hosts to the cluster. @code{queued} will also periodically
check for modifications to these files.
If all has gone well at this stage, you may now try submitting a
sample job to the system. I recommend trying something like @code{queue -i
-w -p -- emacs -nw}. You should be able to background and foreground the
remote EMACS process from the local shell just as if it were running
as a local copy.
Another example command is @code{queue -i -w -- hostname} which should
return the best host (i.e., least loaded, as controlled by options in
the profile file; @xref{Profile}, to run a job on.
The options on queue need to be explained:
@code{-i} specifies immediate execution mode, placing the job in the @code{now}
spool. This is the default. Alternatively, you may specify either the @code{-q} option,
which is shorthand for the @code{wait} spool, or use the @code{-d
spooldir} option to place the job under the control of the @code{profile} file
in the @code{spooldir} subdirectory of the spool directory, which must previously
have been created by the Queue administrator.
In any case, execution of the job will wait until it satisfies the conditions
of the profile file for that particular spool directory, which may
include waiting for a slot to become free. This method of batch processing
is completely compatible with the stub mechanism, although it may
disorient users to use it in this way as they may be unknowingly
forced to wait until a slot on a remote machine becomes available.
@code{-w} activates the stub mechanism, which is the default.
The queue stub process will
terminate when the remote process terminates; you may send signals and
suspend/resume the remote process by doing the same to the stub
process. Standard input/output will be that of the 'queue' stub
process. @code{-r} deactivates the stub process; standard input/output will
be via email back to the users; the @code{queue} process will return
immediately.
@code{-p} or @code{-n} specifies whether or not a virtual tty should be
allocated at the remote end, or whether the system should merely use
the more efficient socket mechanism. Many interactive processes, such
as @code{EMACS} or @code{Matlab}, require a virtual tty to be present, so the @code{-p}
option is required for these. Other processes, such as a simple
@code{hostname} do not require a @code{tty} and so may be run without the
default @code{-p}. Note that @code{queue} is intelligent and will override
the @code{-p} option if it detects both @code{stdio}/@code{stdout} have been re-directed
to a non-terminal; this feature is useful in facilitating system
administration scripts that allow users to execute jobs. [At some
point we may wish to change the default to @code{-p} as the system
automatically detects when @code{-n} will suffice.] Simple, non-interactive
jobs such as @code{hostname} do not need the less efficient pty/tty
mechanism and so should be run with the @code{-n} option. The @code{-n} option
is the default when @code{queue} is invoked in @code{rsh} compatibility mode
with @code{qsh}.
The @code{--} with @code{queue} specifies `end of queue options' and everything beyond this
point is interpreted as the command, or arguments to be given to the
command. Consequently, user options (i.e., when invoking queue through
a script front end, may be placed here):
@pindex SAS
@example
#!/bin/sh
exec queue -i -w -p -- sas $*
@end example
or
@example
#!/bin/sh
exec queue -q -w -p -d sas -- sas $*
@end example
for example. This places queue in immediate mode following
instructions in the @code{now} spool subdirectory (first example) or in
batch-processing mode into the @code{sas} spool subdirectory, provided it
has been created by the administrator. In both cases, stubs are being
used, which will not terminate until the sas process terminates on the
remote end.
In both cases, @code{pty}/@code{ttys} will be allocated, unless the user redirects
both the standard input and standard output of the simple invoking
scripts. Invoking queue through these scripts has the additional
advantage that the process name will be that of the script, clarifying
what is the process is. For example, the script might called @code{sas} or
@code{sas.remote}, causing @code{queue} to appear this way in the user's process
list.
@code{queue} can be used for batch processing by using the @code{-q -r -n}
options, e.g.,
@example
#!/bin/sh
exec queue -q -r -n -d sas -- sas $*
@end example
would run @code{SAS} in batch mode. @code{-q} and @code{-d sas} options force Queue to
follow instructions in the @code{sas/profile} file under Queue's spool
directory and wait for the next available job slot. @code{-r} activates
batch-processing mode, causing Queue to exit immediately and return
results (including stdout and stderr output) via email.
The final option, @code{-n}, is the option to disable allocation of a pty on the
remote end; it is unnecessary in this case (as batch mode disables
ptys anyway) but is here to demonstrate how it might be used in a
@code{-i -w -n} or @code{-q -w -n} invocation.
@node Profile,MPI,Running Queue,Top
@chapter Configure a Job Queue's profile File
@cindex profile file, configuring
@cindex job queue, configuring
@cindex batch queue, configuring
@cindex load scheduler, configuring
@cindex scheduler, configuring
@cindex CPU power differences, defining
@cindex restrictions, job queue, setting
@cindex setting job queue restrictions
@cindex times of day job queue restriction
@cindex limiting number of jobs
@cindex load average job queue limits
@cindex suspending jobs based on load averages
@pindex splus
Under @code{/usr/spool/queue} you may create several directories
for batch jobs, each identified with the class of the
batch job (e.g., @code{sas} or @code{splus}). You may then place
restrictions on that class, such as maximum number of
jobs running, or total CPU time, by placing a @code{profile}
file like this one in that directory.
However, the @code{now} queue is mandatory; it is the
directory used by the @code{-i} mode (immediate moe)
of queue to launch jobs over the network
immediately rather than as batch jobs.
Specify that this queue is turned on:
@kindex exec
@example
exec on
@end example
The next two lines in @code{profile} may be set to an email address
rather than a file; the leading @code{/} identifies
then as file logs. Files now beginning with @code{cf},@code{of}, or @code{ef} are ignored
by the queued:
@kindex mail
@kindex supervisor
@example
mail /usr/local/com/queue/now/mail_log
supervisor /usr/local/com/queue/now/mail_log2
@end example
Note that @code{/usr/local/com/queue} is our spool directory, and @code{now} is
the job batch directory for the special @code{now} queue (run via the @code{-i}
or immediate-mode flag to the queue executable), so these files
may reside in the job batch directories.
@kindex host
@kindex pfactor
The @code{pfactor} command is used to control the likelihood
of a job being executed on a given machine. Typically, this is done
in conjunction with the @code{host} command, which specifies that the option
on the rest of the line be honored on that host only.
In this example, @code{pfactor} is set to the relative MIPS of each
machine, for example:
@example
host fast_host pfactor 100
host slow_host pfactor 50
@end example
Where @code{fast_host} and @code{slow_host} are the hostnames of the respective machines.
@cindex apparant load average
@cindex load average, apparant
@cindex formula, apparant load average
This is useful for controlling load balancing. Each
queue on each machine reports back an `apparant load average'
calculated as follows:
1-min load average/ (( max(0, vmaxexec - maxexec) + 1)*pfactor)
The machine with the lowest apparant load average for that queue
is the one most likely to get the job.
Consequently, a more powerful @code{pfactor} proportionally reduces the load average
that is reported back for this queue, indicating a more
powerful system.
@kindex vmaxexec
@kindex maxexec
Vmaxexec is the ``apparant maximum'' number of jobs allowed to execute in
this queue, or simply equal to maxexec if it was not set.
The default value of these variables is large value treated
by the system as infinity.
@example
host fast_host vmaxexec 2
host slow_host vmaxexec 1
maxexec 3
@end example
The purpose of @code{vmaxexec} is to make the system appear fully loaded
at some point before the maximum number of jobs are already
running, so that the likelihood of the machine being used
tapers off sharply after @code{vmaxexec} slots are filled.
Below @code{vmaxexec} jobs, the system aggressively discriminates against
hosts already running jobs in this Queue.
In job queues running above @code{vmaxexec} jobs, hosts appear more equal to the system,
and only the load average and @code{pfactor} is used to assign jobs. The theory here is that above @code{vmaxexec} jobs, the hosts are fully saturated, and the load average is a better indicator than the simple number of jobs running in a job queue of where
to send the next job.
Thus, under lightly-loaded situations, the system routes jobs around hosts
already running jobs in this job queue. In more heavily loaded situations,
load-averages and @code{pfactor}s are used in determining where to run jobs.
Additional options in @code{profile}
@ftable @code
@item exec
on, off, or drain. Drain drains running jobs.
@item minfree
disk space on specified device must be at least this free.
@item maxfree
maximum number of jobs allowed to run in this queue.
@item loadsched
1 minute load average must be below this value to launch new jobs.
@item loadstop
if 1 minute load average exceeds this, jobs in this queue are suspended until it drops again.
@item timesched
Jobs are only scheduled during these times
@item timestop
Jobs running will be suspended outside of these times
@item nice
Running jobs are at least at this nice value
@item rlimitcpu
maximum cpu time by a job in this queue
@item rlimitdata
maximum data memory size by a job
@item rlimitstack
maximum stack size
@item rlimitfsize
maximum fsize
@item rlimitrss
maximum resident portion size.
@item rlimitcore
maximum size of core dump
@end ftable
These options, if present, will only override the
user's values (via queue) for these limits if they are lower
than what the user has set (or larger in the case of @code{nice}).
@node MPI, Security, Profile,Top
@chapter Running GNU Queue with MPI and PVM.
@cindex MPI, running with Queue
@pindex MPICH
Many MPI implementations (such as the free MPICH implementation) allow you to
specify a replacment utility for rsh/remsh to propagate processes.
@pindex qsh
@cindex qsh
Just use @code{qsh} as the replacement. Be sure the @code{QHOSTSFILE} lists all hosts
known to the MPI implementation, and the queued is running on them.
You have three options: place a @code{+} in the MPI hosts file for each job-slot
you want MPI to be able to start, explicitly list Queue's hosts in the
MPI host file, or use a combination of @code{+} wild-cards and explicitly listed
hosts in MPI's host file.
@cindex qsh, hostname wild-card character
@cindex plus as wildcard, qsh
@cindex + as wildcard, qsh
The @code{+} is GNU Queue's wild-card character for the hostname when it is invoked
using @code{qsh}. It simply means that Queue should decide what host the process should
run on, which is the default behavior for Queue. Specifying a host instead of
using the @code{+} with qsh is equivalent to the @code{-h} option with the regular queue
command-line syntax.
@cindex MPI host file
By placing @code{+}s in the MPI host file, MPI will pass @code{+} as the name of the
host for that job slot to GNU Queue, which, in turn, will decide where the job
should actually run.
@cindex MPI Queue job queue
By running jobs through GNU Queue this way, GNU Queue becomes aware of jobs
submitted by MPI, and can route non-MPI jobs around them. Normally, you would
want to use a job queue (@code{-j} option) which has a low @code{vmaxexec} set and a high
maxexec, so that MPI's jobs will continue to run, but GNU Queue will
aggressively try to route jobs to other hosts the moment the job queue
begins the fill.
@cindex Queue load scheduling algorithm
@cindex MPI load scheduling algorithm
GNU Queue's load scheduling algorithm is smarter than that of many MPI
implementations, which frequently treat all hosts as equal and implement
a round-robin algorithm for deciding which to host to run a job on. GNU
Queue, on the other hand, can take load-averages, CPU power differences (via
@code{profile} file specifiers), and other factors into account when deciding
on which host to send a particular job to.
@cindex MPI, stage-1 hook
@code{qsh} represent a stage-1 hook for MPI. Our development team (@xref{Getting Help},
for information on joining the development team) is currently working on a stage-2 hook,
in which MPI becomes aware of GNU Queue jobs as well, allowing them to work as an
integrated scheduling team.
@cindex PVM support
Support for PVM is currently in development as well.
@node Security,Feedback and Getting Help,MPI,Top
@chapter Security Issues
@menu
* Security for Root:: When the system has been installed by root
* Security for OUsers:: When an ordinary user installed Queue.
@end menu
@node Security for Root,Security for OUsers,Security,Security
@section Installation by System Administrator
@cindex security considerations, installation by system administrator
Security is always a concern when granting root privileges to software.
I was security conscious and knowledgeable about UNIX security issues
when I wrote queue. It should be paranoid in all the right places, at
least provided that the spool directory is root-accessible only (standard
installation) or user-accessible (installation by ordinary user)
only.
Critical ports allow connections only by hosts in the access control list.
Standard checks (TCP/IP wrapper-style) are made to prevent DNS spoofing
and IP forwarding as much as possible. In addition, connections must
be made from privileged ports (root installation version). @code{queue.c} and @code{queued.c}
run with least-privileges, revoking root privileges as soon as they have
verified information and acquired a privileged port.
Moreover, at the time of this writing the source code has been available
for a number of months and has been used at numerous installations, including
some concerned with security.
However, this does not guarantee that security holes do no exist.
It is important that security-conscious users scrutinize the source code and
report any potential security problems to @code{bug-queue@@gnu.org}. By promptly
reporting security issues you will be supporting free software by
ensuring that the public availability of source code is a security
asset.
@node Security for OUsers,,Security for Root,Security
@section Installation by Ordinary User
@cindex security concerns, installation by ordinary user
In this installation mode, GNU Queue
takes many of the same precautions for these users as when it has been
installed cluster-wide by a system administrator.
Unfortunately, when Queue is installed by an ordinary user, privileged
ports are not available. This might make it possible for a malicious user already having a shell
account on the same cluster to have @code{queued} or @code{queue} try to spoof each other.
To close this hole, Queue uses the one-way function @code{crypt(3)} and a cookie passed over NFS to allow @code{queued} and
@code{queue} to authenticate each other. These cookies are used in the root version
as well to prevent port confusion by @code{queued} trying to connect to a @code{queue}
that has earlier died, although they aren't useful from a security standpoint.
@cindex HAVE_IDENTD compile-time security option, installation by ordinary user
@cindex -DHAVE_IDENTD compile-time security option, installation by ordinary user
@cindex @code{identd}, installation by ordinary user
@cindex @code{ident.c}, installation by ordinary user
@cindex RFC 931
When GNU Queue is compiled with the @code{-DHAVE_IDENTD}
(and @code{-DNO_ROOT}),
@code{queued} and @code{queue} also use the @code{identd} service (RFC 931)
to prevent spoofing by checking the ownership of remote sockets
within the cluster. For this to work proplery, @code{identd} must be running on all your cluster hosts, return accurate information (either the
user's login name as given in the password file or his/her uid), and at
least accept connections from within the cluster in a reasonable amount of
time. The @code{./configure} script
tries to set @code{-DHAVE_IDENTD} automatically based on whether or not your host accepts local
connections to port 113, but some systems intentionally allow identd to output
bogus information for privacy reasons, and @code{-DHAVE_IDENTD}
should not be set on these; if this is the case, you may need to re-compile GNU Queue with
@code{HAVE_IDENTD} undefined in @code{config.h}. Fortunately,
@code{queue} will normally complain immediately if @code{-DHAVE_IDENTD}
is set when it shouldn't be.
To get around the performance hit of calling the @code{crypt(3)}, one-way
functions are not used if spoofing queued is impossible due to
privilege ports (root installation) or
authenticated ports (@code{HAVE_IDENTD} service), so running @code{identd}
with GNU Queue or installing GNU Queue cluster-wide as root may offer
a slight performance advantange. In sites which normally send user
passwords over the network in cleartext it is not expected to substancial
improve secure over the cookie passing mechanism, however.
These cookies are passed in plaintext, which means that a malicious user
might be able to observe the NFS network traffic between the hosts and, having shell access on the cluster, might still be able to spoof @code{queue} or
@code{queued}. Since most sites send UNIX account passwords
over the network in cleartext as well, this is only of concern
in very secure sites that do not pass passwords in cleartext over the network.
@cindex secure sites, @code{identd}, using Queue with
In the rare event that your site is a very secure site that does not send
passwords in cleartext, and you are compiling Queue without root privileges,
you should have your administrator install the @code{identd} (RFC 931)
service and re-run @code{./configure} to ensure @code{HAVE_IDENTD} is defined
in @code{config.h}.
@pindex tcp_wrapper
@pindex identd
@cindex tcp_wrapper and ident.c, installation by ordinary user
If your very secure site prefers to spoof @code{identd} for privacy reasons,
your administrator may be able to restrict @code{identd} access
with @code{tcp_wrapper} or install an accurate @code{identd} on a
non-standard port which could restrict connections to within the cluster
via @code{tcp_wrapper}. You would need to re-compile GNU Queue with this
new port number set in @code{ident.c}. Another option is to have your
system administrator install Queue cluster-wide; this uses privileged ports
and therefore may operate securely with resorting to @code{identd}.
These concerns do not apply when Queue has been installed cluster-wide by
root (@code{NO_ROOT} is not defined),
because privileged ports are then available.
@node Feedback and Getting Help,,Security,Top
@chapter Sending Feedback and Getting Help
@menu
* Feedback:: Where to send bug-reports, commends, and suggestions.
* Getting Help:: Websites and mailing-lists
@end menu
@node Feedback,Getting Help,,Feedback and Getting Help
@section Feedback
@cindex Feedback
@cindex Bug reports
@cindex Bug List
@cindex Getting Help
PLEASE SEND US FEEDBACK ON QUEUE!
Whether you have a queue-tip, are queue-less about how to solve a
problem, or simply have another bad queue joke, que[ue] us in at
@code{bug-queue@@gnu.org} and we'll take our que[ue] from you on how best
to improve the software and documentation.
@node Getting Help,,Feedback,Feedback and Getting Help
@section Getting Help
@cindex Development List
@cindex Homepage
The application's homepage is
@code{http://www.gnuqueue.org}
Bug reports should be sent to the bug list @code{bug-queue@@gnu.org}.
@cindex queue-tips list
Users are encouraged to subscribe to and request assistance from the
development list, `queue-developers', as well.
@cindex Development projects
At the time of this writing, the list was working on several fun
projects, including improved MPI
& PVM support, secure socket connections, AFS & Kerberos support. We're also
porting and improving a nifty utility that lets you monitor and control
the execution of Queue jobs throughout your cluster. The list is a great way
to tap into the group's expertise and keep up with the latest developments.
So, come join the fun and keep up with the latest developments by visiting
@code{http://lists.sourceforge.net/mailman/listinfo/queue-developers}.
It is also possible to subscribe from the application's homepage.
It is @code{http://www.gnuqueue.org}
@cindex Krebs, Werner G.
@cindex author, primary
@cindex maintainer
At the time of this writing, GNU Queue is being maintained by
GNU Queue's primary author, W. G. Krebs.
@c ---------------------------------------------------------------------
@node Copying, , ,Top
@appendix GNU GENERAL PUBLIC LICENSE
@include gpl.texinfo
@c ---------------------------------------------------------------------
@node Index, , ,Top
@cindex Index
@unnumbered Index
@printindex cp
@c summarycontents
@contents
@bye
|