File: NEWS.Rd

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r-bioc-annotate 1.84.0%2Bdfsg-2
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\name{annotate-NEWS}
\title{annotate News}

\section{CHANGES IN VERSION 1.47}{
  \subsection{DEFUNCT}{
    \itemize{

      \item \code{probesByLL} is now defunct; use
      \code{AnnotationDbi::select()} instead.

      \item \code{blastSequences} supports multiple sequence queries;
      use \code{as="data.frame"} for output.

      \item Improve \code{blastSequences} strategy for result retrieval,
      querying the appropriate API for status every 10 seconds after
      initial estimated processing time.

    }
  }
}

\section{CHANGES IN VERSION 1.43}{

  \subsection{NEW FEATURES}{

    \itemize{

      \item \code{blastSequences} accepts an argument \code{timeout}
      limiting waiting time for a response; in an interactive session
      and after the timeout is reached, the user may opt to retry the
      query.

      \item \code{blastSequences} accepts an argument
      \code{as} controlling the representation of the return value,
      either a DNAMultipleAlignment, a data.frame, or the XML.

    }
  }
}