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--
-- KEGG_DB schema
-- ==============
--
CREATE TABLE ec2go (
ec_no VARCHAR(16) NOT NULL, -- EC number (with "EC:" prefix)
go_id CHAR(10) NOT NULL -- GO ID
);
CREATE TABLE pathway2gene (
pathway_id CHAR(8) NOT NULL, -- KEGG pathway long ID
gene_id VARCHAR(20) NOT NULL -- Entrez Gene or ORF ID
);
CREATE TABLE pathway2name (
path_id CHAR(5) NOT NULL UNIQUE, -- KEGG pathway short ID
path_name VARCHAR(80) NOT NULL UNIQUE -- KEGG pathway name
);
-- Metadata tables.
CREATE TABLE metadata (
name VARCHAR(80) PRIMARY KEY,
value VARCHAR(255)
);
CREATE TABLE qcdata (
map_name VARCHAR(80) PRIMARY KEY,
count INTEGER NOT NULL
);
CREATE TABLE map_metadata (
map_name VARCHAR(80) NOT NULL,
source_name VARCHAR(80) NOT NULL,
source_url VARCHAR(255) NOT NULL,
source_date VARCHAR(20) NOT NULL
);
-- Indexes.
CREATE INDEX Ipathway2gene ON pathway2gene (gene_id);
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