1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35
|
\name{makeGOGraph}
\alias{makeGOGraph}
\title{A convenience function to generate graphs based on the GO.db package}
\description{
\code{makeGOGraph} is a function to quickly convert any of the three Gene
Ontologies in GO.db into a graphNEL object where each edge is given a
weight of 1.
}
\usage{
makeGOGraph(ont = c("bp","mf","cc"))
}
\arguments{
\item{ont}{Specifies the ontology: "cc", "bp" or "mf".}
}
\author{Marc Carlson}
\seealso{
\code{\link{GOTerms}}
}
\examples{
## makes a GO graph from the CC ontology
f <- makeGOGraph("cc")
}
\keyword{utilities}
\keyword{manip}
|