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Source: r-bioc-biocio
Section: gnu-r
Priority: optional
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders: Andreas Tille <tille@debian.org>
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-biocio
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-biocio.git
Homepage: https://bioconductor.org/packages/BiocIO/
Standards-Version: 4.6.1
Rules-Requires-Root: no
Build-Depends: debhelper-compat (= 13),
dh-r,
r-base-dev,
r-bioc-biocgenerics,
r-bioc-s4vectors
Testsuite: autopkgtest-pkg-r
Package: r-bioc-biocio
Architecture: all
Depends: ${R:Depends},
${misc:Depends}
Recommends: ${R:Recommends}
Suggests: ${R:Suggests}
Description: standard input and output for Bioconductor packages
Implements `import()` and `export()` standard generics
for importing and exporting biological data formats. `import()`
supports whole-file as well as chunk-wise iterative import. The
`import()` interface optionally provides a standard mechanism for
'lazy' access via `filter()` (on row or element-like components of
the file resource), `select()` (on column-like components of the
file resource) and `collect()`. The `import()` interface
optionally provides transparent access to remote (e.g. via https)
as well as local access. Developers can register a file extension,
e.g., `.loom` for dispatch from character-based URIs to specific
`import()` / `export()` methods based on classes representing file
types, e.g., `LoomFile()`.
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