File: DelayedOp-class.Rd

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\name{DelayedOp-class}

% DelayedOp objects
\alias{class:DelayedOp}
\alias{DelayedOp-class}
\alias{DelayedOp}

\alias{is_noop}
\alias{summary.DelayedOp}
\alias{summary,DelayedOp-method}

% DelayedUnaryOp objects
\alias{class:DelayedUnaryOp}
\alias{DelayedUnaryOp-class}
\alias{DelayedUnaryOp}

% DelayedUnaryIsoOp objects
\alias{class:DelayedUnaryIsoOp}
\alias{DelayedUnaryIsoOp-class}
\alias{DelayedUnaryIsoOp}

\alias{dim,DelayedUnaryIsoOp-method}
\alias{dimnames,DelayedUnaryIsoOp-method}
\alias{extract_array,DelayedUnaryIsoOp-method}

\alias{is_sparse,DelayedUnaryIsoOp-method}
\alias{extract_sparse_array,DelayedUnaryIsoOp-method}
\alias{OLD_extract_sparse_array,DelayedUnaryIsoOp-method}

% DelayedNaryOp objects
\alias{class:DelayedNaryOp}
\alias{DelayedNaryOp-class}
\alias{DelayedNaryOp}

% updateObject()
\alias{updateObject,DelayedOp-method}

\title{DelayedOp objects}

\description{
  NOTE: This man page is about \link{DelayedArray} internals and is provided
  for developers and advanced users only.

  In a \link{DelayedArray} object, the delayed operations are stored as a
  tree where the leaves are operands and the nodes are the operations.
  Each node in the tree is a DelayedOp derivative representing a particular
  delayed operation.

  DelayedOp is a virtual class with 8 concrete subclasses. Each subclass
  provides a formal representation for a particular kind of delayed
  operation.
}

\usage{
is_noop(x)
}

\arguments{
  \item{x}{
    A DelayedSubset, DelayedAperm, or DelayedSetDimnames object.
  }
}

\details{
  8 types of nodes are currently supported. Each type is a DelayedOp subclass:

  \preformatted{  Node type                        Represented operation
  ------------------------------------------------------------------
  DelayedOp (VIRTUAL)
  ------------------------------------------------------------------
  * DelayedUnaryOp (VIRTUAL)
    o DelayedSubset                Multi-dimensional single bracket
                                   subsetting.
    o DelayedAperm                 Extended aperm() (can drop and/or
                                   add ineffective dimensions).
    o DelayedUnaryIsoOp (VIRTUAL)  Unary op that preserves the
                                   geometry.
      - DelayedUnaryIsoOpStack     Simple ops stacked together.
      - DelayedUnaryIsoOpWithArgs  One op with vector-like arguments
                                   along the dimensions of the input.
      - DelayedSubassign           Multi-dimensional single bracket
                                   subassignment.
      - DelayedSetDimnames         Set/replace the dimnames.
  ------------------------------------------------------------------
  * DelayedNaryOp (VIRTUAL)
    o DelayedNaryIsoOp             N-ary op that preserves the
                                   geometry.
    o DelayedAbind                 abind()
  ------------------------------------------------------------------
  }

  All DelayedOp objects must comply with the \emph{seed contract} i.e. they
  must support \code{dim()}, \code{dimnames()}, and \code{extract_array()}.
  See \code{?\link[S4Arrays]{extract_array}} in the \pkg{S4Arrays} package
  for more information about the \emph{seed contract}.
  This makes them de facto array-like objects. However, end users will never
  interact with them directly, except for the root of the tree which is the
  DelayedArray object itself and the only node in the tree that they are able
  to see and touch.

  \code{is_noop()} can only be called on a DelayedSubset, DelayedAperm,
  or DelayedSetDimnames object at the moment, and will return \code{TRUE}
  if the object represents a no-op.
}

\note{
  The DelayedOp virtual class and its 8 concrete subclasses are used inside
  a \link{DelayedArray} object to represent delayed operations carried by
  the object. They're never exposed to the end user and are not intended to
  be manipulated directly.
}

\seealso{
  \itemize{
    \item DelayedOp concrete subclasses: \link{DelayedSubset},
          \link{DelayedAperm}, \link{DelayedUnaryIsoOpStack},
          \link{DelayedUnaryIsoOpWithArgs}, \link{DelayedSubassign},
          \link{DelayedSetDimnames}, \link{DelayedNaryIsoOp},
          and \link{DelayedAbind}.

    \item \link{DelayedArray} objects.

    \item \code{\link{showtree}} to visualize the nodes and access the
          leaves in the tree of delayed operations carried by a
          \link{DelayedArray} object.

    \item \code{\link{simplify}} to simplify the tree of delayed
          operations carried by a \link{DelayedArray} object.

    \item \code{\link[S4Arrays]{extract_array}} in the \pkg{S4Arrays} package.
  }
}

\keyword{methods}