1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
|
% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/DeMixT_Preprocessing.R
\name{scale_normalization_75th_percentile}
\alias{scale_normalization_75th_percentile}
\title{scale_normalization_75th_percentile}
\usage{
scale_normalization_75th_percentile(count.matrix)
}
\arguments{
\item{count.matrix}{A matrix of raw expression count with \eqn{G} by \eqn{(My + M1)}, where \eqn{G} is the number
of genes, \eqn{My} is the number of mixed samples and \eqn{M1} is the number of normal samples. Row names are genes
column names are sample ids.}
}
\value{
the scale normalized count matrix
}
\description{
Quantile normalization for the raw count matrix of tumor and normal reference using the 0.75 quantile scale normalization
}
|