File: dispersions.Rd

package info (click to toggle)
r-bioc-deseq2 1.14.1-1
  • links: PTS, VCS
  • area: main
  • in suites: stretch
  • size: 2,816 kB
  • ctags: 9
  • sloc: cpp: 374; sh: 14; makefile: 2
file content (37 lines) | stat: -rw-r--r-- 902 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/AllGenerics.R, R/methods.R
\docType{methods}
\name{dispersions}
\alias{dispersions}
\alias{dispersions,DESeqDataSet-method}
\alias{dispersions<-}
\alias{dispersions<-,DESeqDataSet,numeric-method}
\title{Accessor functions for the dispersion estimates in a DESeqDataSet
object.}
\usage{
dispersions(object, ...)

dispersions(object, ...) <- value

\S4method{dispersions}{DESeqDataSet}(object)

\S4method{dispersions}{DESeqDataSet,numeric}(object) <- value
}
\arguments{
\item{object}{a \code{DESeqDataSet} object.}

\item{...}{additional arguments}

\item{value}{the dispersions to use for the Negative Binomial modeling}
}
\description{
The dispersions for each row of the DESeqDataSet.  Generally,
these are set by \code{\link{estimateDispersions}}.
}
\author{
Simon Anders
}
\seealso{
\code{\link{estimateDispersions}}
}