File: RcppExports.R

package info (click to toggle)
r-bioc-deseq2 1.46.0%2Bdfsg-2
  • links: PTS, VCS
  • area: main
  • in suites: sid, trixie
  • size: 1,748 kB
  • sloc: cpp: 413; makefile: 2
file content (15 lines) | stat: -rw-r--r-- 1,441 bytes parent folder | download | duplicates (3) 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
 
# Generated by using Rcpp::compileAttributes() -> do not edit by hand
# Generator token: 10BE3573-1514-4C36-9D1C-5A225CD40393

fitDisp <- function(ySEXP, xSEXP, mu_hatSEXP, log_alphaSEXP, log_alpha_prior_meanSEXP, log_alpha_prior_sigmasqSEXP, min_log_alphaSEXP, kappa_0SEXP, tolSEXP, maxitSEXP, usePriorSEXP, weightsSEXP, useWeightsSEXP, weightThresholdSEXP, useCRSEXP) {
    .Call('_DESeq2_fitDisp', PACKAGE = 'DESeq2', ySEXP, xSEXP, mu_hatSEXP, log_alphaSEXP, log_alpha_prior_meanSEXP, log_alpha_prior_sigmasqSEXP, min_log_alphaSEXP, kappa_0SEXP, tolSEXP, maxitSEXP, usePriorSEXP, weightsSEXP, useWeightsSEXP, weightThresholdSEXP, useCRSEXP)
}

fitBeta <- function(ySEXP, xSEXP, nfSEXP, alpha_hatSEXP, contrastSEXP, beta_matSEXP, lambdaSEXP, weightsSEXP, useWeightsSEXP, tolSEXP, maxitSEXP, useQRSEXP, minmuSEXP) {
    .Call('_DESeq2_fitBeta', PACKAGE = 'DESeq2', ySEXP, xSEXP, nfSEXP, alpha_hatSEXP, contrastSEXP, beta_matSEXP, lambdaSEXP, weightsSEXP, useWeightsSEXP, tolSEXP, maxitSEXP, useQRSEXP, minmuSEXP)
}

fitDispGrid <- function(ySEXP, xSEXP, mu_hatSEXP, disp_gridSEXP, log_alpha_prior_meanSEXP, log_alpha_prior_sigmasqSEXP, usePriorSEXP, weightsSEXP, useWeightsSEXP, weightThresholdSEXP, useCRSEXP) {
    .Call('_DESeq2_fitDispGrid', PACKAGE = 'DESeq2', ySEXP, xSEXP, mu_hatSEXP, disp_gridSEXP, log_alpha_prior_meanSEXP, log_alpha_prior_sigmasqSEXP, usePriorSEXP, weightsSEXP, useWeightsSEXP, weightThresholdSEXP, useCRSEXP)
}