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setGeneric(
name = "plotQuality",
def = function(x,...) {standardGeneric("plotQuality")}
)
setGeneric(
name = "biasPlot",
def = function(x,y,...) {standardGeneric("biasPlot")}
)
setGeneric(
name = "meanVarPlot",
def = function(x,...) {standardGeneric("meanVarPlot")}
)
setGeneric(
name = "MDPlot",
def = function(x,y,...) {standardGeneric("MDPlot")}
)
setGeneric(
name = "biasBoxplot",
def = function(x,y,num.bins,...) {standardGeneric("biasBoxplot")}
)
setGeneric(
name = "offst",
def = function(object) {standardGeneric("offst")}
)
setGeneric(
name = "offst<-",
def = function(object,value) {standardGeneric("offst<-")}
)
setGeneric(
name = "betweenLaneNormalization",
def = function(x, which=c("median","upper","full"), offset=FALSE, round=TRUE) {standardGeneric("betweenLaneNormalization")}
)
setGeneric(
name = "withinLaneNormalization",
def = function(x, y, which=c("loess","median","upper","full"), offset=FALSE, num.bins=10, round=TRUE) {standardGeneric("withinLaneNormalization")}
)
setGeneric(
name = "plotNtFrequency",
def = function(x,...) {standardGeneric("plotNtFrequency")}
)
setGeneric(
name = "plotRLE",
def = function(x,...) {standardGeneric("plotRLE")}
)
setGeneric(
name = "normCounts",
def = function(object) {standardGeneric("normCounts")}
)
setGeneric(
name = "normCounts<-",
def = function(object, value) {standardGeneric("normCounts<-")}
)
|
