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Source: r-bioc-ioniser
Section: gnu-r
Priority: optional
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders: Andreas Tille <tille@debian.org>
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-ioniser
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-ioniser.git
Homepage: https://bioconductor.org/packages/IONiseR/
Standards-Version: 4.6.1
Rules-Requires-Root: no
Build-Depends: debhelper-compat (= 13),
dh-r,
r-base-dev,
r-bioc-rhdf5,
r-cran-dplyr,
r-cran-magrittr,
r-cran-tidyr,
r-bioc-shortread,
r-bioc-biostrings,
r-cran-ggplot2,
r-bioc-biocgenerics,
r-bioc-xvector,
r-cran-tibble,
r-bioc-biocparallel,
r-cran-bit64,
r-cran-stringr,
# <dh-update-R>do not delete this</dh-update-R>
r-bioc-biocstyle,
r-cran-knitr,
r-cran-markdown
Testsuite: autopkgtest-pkg-r
Package: r-bioc-ioniser
Architecture: all
Depends: ${R:Depends},
${misc:Depends}
Recommends: ${R:Recommends}
Suggests: ${R:Suggests}
Description: Quality Assessment Tools for Oxford Nanopore MinION data
IONiseR provides tools for the quality assessment of
Oxford Nanopore MinION data. It extracts summary statistics
from a set of fast5 files and can be used either before or
after base calling. In addition to standard summaries of the
read-types produced, it provides a number of plots for
visualising metrics relative to experiment run time or
spatially over the surface of a flowcell.
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