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Source: r-bioc-mofa
Section: gnu-r
Priority: optional
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders: Steffen Moeller <moeller@debian.org>
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-mofa
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-mofa.git
Homepage: https://bioconductor.org/packages/MOFA/
Standards-Version: 4.6.2
Rules-Requires-Root: no
Build-Depends: debhelper-compat (= 13),
dh-r,
r-base-dev,
xvfb,
r-bioc-rhdf5,
r-cran-dplyr,
r-cran-reshape2,
r-cran-pheatmap,
r-cran-corrplot,
r-cran-ggplot2,
r-cran-ggbeeswarm,
r-cran-scales,
r-cran-ggally,
r-cran-rcolorbrewer,
r-cran-cowplot,
r-cran-ggrepel,
r-bioc-biobase,
r-cran-doparallel,
r-cran-foreach,
r-cran-reticulate,
r-bioc-multiassayexperiment,
python3-all,
dh-python,
python3-pandas,
python3-setuptools,
python3-scipy,
python3-numpy,
python3-sklearn,
python3-h5py
Testsuite: autopkgtest-pkg-r
Package: r-bioc-mofa
Architecture: all
Depends: ${R:Depends},
${shlibs:Depends},
${misc:Depends},
python3-mofapy
Recommends: ${R:Recommends}
Suggests: ${R:Suggests}
Description: Multi-Omics Factor Analysis (MOFA)
Multi-Omics Factor Analysis: an unsupervised framework for the
integration of multi-omics data sets.
.
Upstream no longer supports this package. This package only still
ships to help with rerunning/comparing/transitioning existing projects.
For new projects please upgrade to MOFA2 (MOFA+). Actually, also when
adding new data to old projects, MOFA2 has further improved the handling
of multiple factors, and to compensate for a batch effect that is likely
introduced with additional data, may be an immediate use case for that
new version.
Package: python3-mofapy
Section: python
Architecture: all
Depends: ${python3:Depends},
${misc:Depends}
Recommends: python3-pandas,
python3-scipy,
python3-numpy,
python3-sklearn,
python3-sklearn-pandas,
python3-h5py
Suggests: r-bioc-mofa
Description: Multi-Omics Factor Analysis (MOFA) - Python module
Multi-Omics Factor Analysis: an unsupervised framework for the
integration of multi-omics data sets.
.
This package is required by the R package to function.
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