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Author: Dylan Aïssi <daissi@debian.org>
Description: r-bioc-RaggedExperiment is not yet available in Debian.
Forwarded: TODO
--- a/tests/testthat/test-combine.R
+++ b/tests/testthat/test-combine.R
@@ -29,6 +29,7 @@
rowRanges=rowRanges, colData=colData)
rse <- rse[, 1:4]
+ skip_if_not_installed("RaggedExperiment")
library(RaggedExperiment)
sample1 <- GRanges(c(a = "chr1:1-10:-", b = "chr1:11-18:+"), score = 1:2)
sample2 <- GRanges(c(c = "chr2:1-10:-", d = "chr2:11-18:+"), score = 3:4)
--- a/tests/testthat/test-constructors.R
+++ b/tests/testthat/test-constructors.R
@@ -15,6 +15,8 @@
grl <- GRangesList("gr1" = gr1, "gr2" = gr2, "gr3" = gr3)
names(grl) <- c("snparray1", "snparray2", "snparray3")
+
+skip_if_not_installed("RaggedExperiment")
RagExp <- RaggedExperiment::RaggedExperiment(grl)
arraydat <- matrix(seq(101, 108), ncol=4,
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