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|
##fileformat=VCFv4.1
##fileDate=20210324
##reference=file:///hpc/cog_bioinf/GENOMES/Homo_sapiens.GRCh37.GATK.illumina/Homo_sapiens.GRCh37.GATK.illumina.fasta
##source=SelectVariants
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=AD,Number=.,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth (reads with MQ=255 or with bad mates are filtered)">
##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
##FORMAT=<ID=PL,Number=G,Type=Integer,Description="Normalized, Phred-scaled likelihoods for genotypes as defined in the VCF specification">
##contig=<ID=1,length=249250621,assembly="hg19">
##contig=<ID=2,length=243199373,assembly="hg19">
##contig=<ID=3,length=198022430,assembly="hg19">
##contig=<ID=4,length=191154276,assembly="hg19">
##contig=<ID=5,length=180915260,assembly="hg19">
##contig=<ID=6,length=171115067,assembly="hg19">
##contig=<ID=7,length=159138663,assembly="hg19">
##contig=<ID=8,length=146364022,assembly="hg19">
##contig=<ID=9,length=141213431,assembly="hg19">
##contig=<ID=10,length=135534747,assembly="hg19">
##contig=<ID=11,length=135006516,assembly="hg19">
##contig=<ID=12,length=133851895,assembly="hg19">
##contig=<ID=13,length=115169878,assembly="hg19">
##contig=<ID=14,length=107349540,assembly="hg19">
##contig=<ID=15,length=102531392,assembly="hg19">
##contig=<ID=16,length=90354753,assembly="hg19">
##contig=<ID=17,length=81195210,assembly="hg19">
##contig=<ID=18,length=78077248,assembly="hg19">
##contig=<ID=19,length=59128983,assembly="hg19">
##contig=<ID=20,length=63025520,assembly="hg19">
##contig=<ID=21,length=48129895,assembly="hg19">
##contig=<ID=22,length=51304566,assembly="hg19">
##contig=<ID=X,length=155270560,assembly="hg19">
##contig=<ID=Y,length=59373566,assembly="hg19">
##contig=<ID=MT,length=16569,assembly="hg19">
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT PD21928b
1 104731912 1:104731912_C/T C T 534.68 PASS . GT:AD:DP:GQ:PL 0/0:45,0:45:99:0,120,1228
1 114490785 1:114490785_A/G A G 324.68 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,111,1243
1 121345091 1:121345091_C/A C A 554.68 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,117,1292
1 156119683 1:156119683_G/A G A 433.68 PASS . GT:AD:DP:GQ:PL 0/0:22,0:22:63:0,63,682
1 160706471 1:160706471_G/A G A 299.68 PASS . GT:AD:DP:GQ:PL 0/0:20,0:20:54:0,54,573
1 161385225 1:161385225_A/G A G 235.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:63:0,63,679
1 175572587 1:175572587_T/C T C 264.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:93:0,93,997
1 178053497 1:178053497_C/T C T 233.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:81:0,81,881
1 179814295 1:179814295_T/C T C 476.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:34:99:0,99,1112
1 182731775 1:182731775_T/C T C 447.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:84:0,84,917
1 183219123 1:183219123_T/A T A 153.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:87:0,87,960
1 183365449 1:183365449_T/G T G 481.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:75:0,75,825
1 188113460 1:188113460_T/G T G 351.68 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,102,1121
1 188325230 1:188325230_C/T C T 436.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:84:0,84,846
1 196952001 1:196952001_G/T G T 326.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:93:0,93,1050
1 19703695 1:19703695_G/T G T 527.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:84:0,84,939
1 199040752 1:199040752_A/C A C 629.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:78:0,78,870
1 20916974 1:20916974_G/A G A 441.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:75:0,75,831
1 213256016 1:213256016_A/C A C 373.68 PASS . GT:AD:DP:GQ:PL 0/0:39,0:40:99:0,114,1297
1 221853187 1:221853187_T/G T G 294.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:93:0,93,1039
1 222339087 1:222339087_G/A G A 708.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:75:0,75,838
1 222565640 1:222565640_C/T C T 412.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:32:87:0,87,881
1 235667524 1:235667524_G/C G C 234.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:72:0,72,709
1 242403149 1:242403149_A/T A T 290.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:96:0,96,1088
1 31216855 1:31216855_C/T C T 230.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:63:0,63,691
1 39204535 1:39204535_C/T C T 356.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:34:84:0,84,876
1 4089175 1:4089175_C/T C T 385.68 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,114,1165
1 4513626 1:4513626_G/T G T 456.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:69:0,69,696
1 74633038 1:74633038_A/G A G 398.68 PASS . GT:AD:DP:GQ:PL 0/0:21,0:22:60:0,60,655
1 75384296 1:75384296_C/G C G 481.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:84:0,84,932
1 85435628 1:85435628_C/T C T 337.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:87:0,87,878
2 101074532 2:101074532_T/C T C 460.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:32:93:0,93,1044
2 104301508 2:104301508_C/T C T 177.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:81:0,81,820
2 104333042 2:104333042_G/T G T 221.68 PASS . GT:AD:DP:GQ:PL 0/0:37,0:38:99:0,108,1220
2 119991123 2:119991123_A/G A G 337.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:30:87:0,87,952
2 125232436 2:125232436_C/T C T 623.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,99,1013
2 126224508 2:126224508_G/T G T 412.68 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,108,1101
2 137891146 2:137891146_G/C G C 352.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:78:0,78,851
2 139264535 2:139264535_G/A G A 438.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:75:0,75,854
2 140564675 2:140564675_G/T G T 316.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:72:0,72,801
2 141067649 2:141067649_G/A G A 570.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:78:0,78,883
2 142732122 2:142732122_G/T G T 286.69 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:72:0,72,799
2 155416617 2:155416617_C/T C T 320.68 PASS . GT:AD:DP:GQ:PL 0/0:35,0:35:96:0,96,975
2 160461928 2:160461928_T/C T C 383.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:81:0,81,880
2 187349175 2:187349175_G/C G C 306.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:72:0,72,799
2 193767619 2:193767619_A/T A T 484.68 PASS . GT:AD:DP:GQ:PL 0/0:23,0:23:69:0,69,752
2 198068963 2:198068963_T/C T C 516.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:69:0,69,766
2 208761161 2:208761161_T/C T C 222.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:81:0,81,884
2 214119220 2:214119220_C/T C T 411.68 PASS . GT:AD:DP:GQ:PL 0/0:41,0:41:99:0,117,1151
2 214593891 2:214593891_G/A G A 516.68 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:96:0,96,972
2 217605036 2:217605036_C/T C T 363.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:93:0,93,972
2 217639776 2:217639776_G/A G A 215.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:81:0,81,833
2 21929238 2:21929238_C/A C A 393.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:96:0,96,1082
2 26321612 2:26321612_T/G T G 376.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:32:87:0,87,987
2 35941765 2:35941765_T/C T C 243.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:93:0,93,1014
2 40162412 2:40162412_C/T C T 220.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:84:0,84,920
2 4475010 2:4475010_G/A G A 446.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,99,982
2 54912526 2:54912526_G/A G A 361.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,99,1008
2 55085679 2:55085679_A/G A G 703.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,108,1175
2 57592511 2:57592511_G/A G A 373.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:30:63:0,63,630
2 57880172 2:57880172_C/T C T 431.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:75:0,75,730
2 68007588 2:68007588_G/A G A 465.68 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,120,1331
2 73220189 2:73220189_G/A G A 717.68 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:87:0,87,901
2 75952379 2:75952379_C/T C T 324.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:66:0,66,685
2 81618161 2:81618161_C/T C T 551.68 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,114,1240
2 88826953 2:88826953_C/T C T 560.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:54:0,54,603
2 89036545 2:89036545_A/G A G 401.68 PASS . GT:AD:DP:GQ:PL 0/0:38,0:38:99:0,108,1174
3 104163405 3:104163405_G/A G A 283.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:84:0,84,826
3 104444002 3:104444002_C/T C T 504.68 PASS . GT:AD:DP:GQ:PL 0/0:23,0:24:66:0,66,737
3 109099792 3:109099792_G/A G A 278.68 PASS . GT:AD:DP:GQ:PL 0/0:22,0:22:57:0,57,560
3 109177637 3:109177637_G/A G A 312.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:87:0,87,885
3 110619262 3:110619262_C/T C T 706.68 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,123,1365
3 112566673 3:112566673_C/T C T 290.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:99:0,99,977
3 121481671 3:121481671_C/T C T 614.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,102,1026
3 128713597 3:128713597_C/T C T 131.68 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:84:0,84,865
3 137582446 3:137582446_G/A G A 414.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,99,975
3 146653527 3:146653527_C/A C A 455.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:75:0,75,836
3 164305739 3:164305739_C/G C G 446.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:96:0,96,1064
3 166611709 3:166611709_A/G A G 500.68 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:87:0,87,966
3 167199978 3:167199978_A/G A G 332.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:87:0,87,965
3 17402949 3:17402949_T/C T C 595.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:69:0,69,728
3 192368290 3:192368290_C/T C T 433.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,99,1115
3 196140936 3:196140936_C/A C A 327.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:96:0,96,1082
3 20616422 3:20616422_C/T C T 406.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:72:0,72,790
3 21592257 3:21592257_G/A G A 458.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:84:0,84,849
3 26327174 3:26327174_G/T G T 491.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:87:0,87,1003
3 40214063 3:40214063_G/A G A 620.68 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,108,1084
3 59927492 3:59927492_C/T C T 324.68 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,120,1240
3 6990280 3:6990280_C/G C G 472.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:78:0,78,872
3 74334351 3:74334351_A/G A G 248.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:93:0,93,1048
3 78316409 3:78316409_A/G A G 221.68 PASS . GT:AD:DP:GQ:PL 0/0:30,0:31:87:0,87,965
3 78454885 3:78454885_C/T C T 307.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:93:0,93,959
3 82363322 3:82363322_C/T C T 461.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:72:0,72,710
3 89368554 3:89368554_G/A G A 322.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:81:0,81,785
3 95427148 3:95427148_A/T A T 396.68 PASS . GT:AD:DP:GQ:PL 0/0:35,0:35:99:0,99,1093
4 112461667 4:112461667_C/G C G 349.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:93:0,93,1036
4 11292164 4:11292164_T/A T A 373.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:33:90:0,90,1004
4 115391352 4:115391352_G/T G T 485.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,102,1132
4 130379442 4:130379442_G/A G A 251.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:69:0,69,690
4 131688715 4:131688715_C/T C T 289.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:81:0,81,840
4 131937727 4:131937727_T/A T A 457.68 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:84:0,84,929
4 133424552 4:133424552_C/G C G 371.68 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:87:0,87,962
4 135906887 4:135906887_C/T C T 311.68 PASS . GT:AD:DP:GQ:PL 0/0:50,0:50:99:0,141,1409
4 135953054 4:135953054_C/A C A 350.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:96:0,96,1058
4 136250892 4:136250892_C/T C T 371.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:90:0,90,904
4 136731148 4:136731148_G/A G A 368.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:81:0,81,808
4 139862161 4:139862161_C/T C T 215.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:69:0,69,701
4 140145746 4:140145746_C/T C T 374.68 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,108,1133
4 148134348 4:148134348_T/C T C 280.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,99,1105
4 159029949 4:159029949_G/A G A 418.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:90:0,90,865
4 167684490 4:167684490_C/A C A 293.68 PASS . GT:AD:DP:GQ:PL 0/0:42,0:42:99:0,120,1320
4 168598552 4:168598552_G/A G A 251.68 PASS . GT:AD:DP:GQ:PL 0/0:20,0:20:51:0,51,519
4 176071463 4:176071463_C/A C A 453.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,102,1166
4 179301524 4:179301524_C/T C T 362.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:75:0,75,740
4 181851131 4:181851131_G/A G A 508.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:96:0,96,935
4 18650655 4:18650655_G/A G A 480.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:35:99:0,102,1116
4 189297131 4:189297131_G/A G A 281.68 PASS . GT:AD:DP:GQ:PL 0/0:35,0:35:99:0,102,1014
4 24648696 4:24648696_G/T G T 497.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:90:0,90,945
4 26171721 4:26171721_C/T C T 482.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:75:0,75,833
4 30270997 4:30270997_G/T G T 473.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:81:0,81,881
4 32661318 4:32661318_C/A C A 378.68 PASS . GT:AD:DP:GQ:PL 0/0:35,0:35:99:0,102,1144
4 33223653 4:33223653_A/T A T 342.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:84:0,84,950
4 35304155 4:35304155_C/T C T 194.68 PASS . GT:AD:DP:GQ:PL 0/0:20,0:20:60:0,60,662
4 43313869 4:43313869_G/T G T 583.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:81:0,81,879
4 43402224 4:43402224_C/T C T 580.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:96:0,96,1061
4 58784273 4:58784273_T/A T A 239.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:75:0,75,813
4 59952243 4:59952243_G/A G A 398.68 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,120,1252
4 61362760 4:61362760_C/T C T 274.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:66:0,66,631
4 64749432 4:64749432_A/G A G 346.68 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,102,1107
4 7881681 4:7881681_G/A G A 258.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:69:0,69,681
4 8347742 4:8347742_C/T C T 548.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:66:0,66,687
5 107920168 5:107920168_G/A G A 436.68 PASS . GT:AD:DP:GQ:PL 0/0:35,0:35:99:0,105,1170
5 123427307 5:123427307_G/A G A 588.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:87:0,87,984
5 165014220 5:165014220_C/A C A 195.68 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,102,1142
5 165838652 5:165838652_G/A G A 258.68 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,105,1061
5 166353926 5:166353926_G/A G A 468.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:72:0,72,734
5 178160460 5:178160460_C/T C T 508.68 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,102,1001
5 23357568 5:23357568_T/G T G 344.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:69:0,69,766
5 25630907 5:25630907_C/T C T 384.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:84:0,84,813
5 26452825 5:26452825_G/T G T 428.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,108,1204
5 26716507 5:26716507_C/T C T 332.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:84:0,84,906
5 26830088 5:26830088_G/T G T 377.68 PASS . GT:AD:DP:GQ:PL 0/0:23,0:23:63:0,63,683
5 26904879 5:26904879_G/A G A 349.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:72:0,72,703
5 28143954 5:28143954_G/A G A 510.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:72:0,72,706
5 30392421 5:30392421_T/C T C 341.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:72:0,72,784
5 34225231 5:34225231_A/G A G 105.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,108,1215
5 35095269 5:35095269_C/A C A 585.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:90:0,90,987
5 43506179 5:43506179_C/G C G 286.68 PASS . GT:AD:DP:GQ:PL 0/0:23,0:23:69:0,69,777
5 45996529 5:45996529_G/A G A 492.68 PASS . GT:AD:DP:GQ:PL 0/0:38,0:39:99:0,111,1103
5 73052358 5:73052358_A/G A G 479.68 PASS . GT:AD:DP:GQ:PL 0/0:46,0:46:99:0,135,1524
5 76107555 5:76107555_G/T G T 495.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:75:0,75,820
5 84693533 5:84693533_G/T G T 383.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:75:0,75,813
5 85937577 5:85937577_G/A G A 484.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,108,1076
5 92808624 5:92808624_G/A G A 429.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:90:0,90,1007
5 93635128 5:93635128_G/A G A 396.68 PASS . GT:AD:DP:GQ:PL 0/0:21,0:21:51:0,51,527
5 98269830 5:98269830_G/A G A 436.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:75:0,75,819
5 99153864 5:99153864_C/T C T 383.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:72:0,72,773
6 100915869 6:100915869_A/G A G 396.68 PASS . GT:AD:DP:GQ:PL 0/0:23,0:23:63:0,63,689
6 111618544 6:111618544_G/C G C 672.68 PASS . GT:AD:DP:GQ:PL 0/0:38,0:38:99:0,108,1208
6 115289141 6:115289141_G/T G T 332.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:87:0,87,940
6 116942922 6:116942922_G/A G A 545.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:90:0,90,883
6 125958962 6:125958962_C/T C T 497.68 PASS . GT:AD:DP:GQ:PL 0/0:46,0:46:99:0,132,1350
6 126739600 6:126739600_A/G A G 351.68 PASS . GT:AD:DP:GQ:PL 0/0:20,0:20:60:0,60,651
6 131161129 6:131161129_A/G A G 359.68 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,111,1225
6 135055772 6:135055772_G/A G A 347.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:78:0,78,779
6 147391956 6:147391956_C/A C A 285.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:96:0,96,1048
6 15021961 6:15021961_A/G A G 493.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:69:0,69,765
6 152008559 6:152008559_C/A C A 523.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:78:0,78,862
6 20419792 6:20419792_A/G A G 467.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:75:0,75,845
6 28551382 6:28551382_T/G T G 398.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:84:0,84,959
6 35091961 6:35091961_G/A G A 263.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:84:0,84,852
6 35951447 6:35951447_G/A G A 444.68 PASS . GT:AD:DP:GQ:PL 0/0:21,0:21:54:0,54,599
6 37576736 6:37576736_A/G A G 332.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:93:0,93,1011
6 44641970 6:44641970_G/C G C 475.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:37:99:0,102,1116
6 50502132 6:50502132_T/G T G 418.68 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,123,1342
6 54426614 6:54426614_G/A G A 408.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:75:0,75,726
6 55235871 6:55235871_C/T C T 311.68 PASS . GT:AD:DP:GQ:PL 0/0:22,0:22:63:0,63,685
6 58065663 6:58065663_A/T A T 304.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:69:0,69,755
6 63921458 6:63921458_C/T C T 312.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:66:0,66,673
6 68698927 6:68698927_G/A G A 474.68 PASS . GT:AD:DP:GQ:PL 0/0:21,0:21:63:0,63,605
6 74758335 6:74758335_A/G A G 538.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:72:0,72,787
6 74898140 6:74898140_G/A G A 304.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,99,1009
6 89992458 6:89992458_G/A G A 270.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:87:0,87,876
6 96540015 6:96540015_C/T C T 283.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:75:0,75,831
6 98630345 6:98630345_A/G A G 354.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:96:0,96,1089
7 101713734 7:101713734_G/A G A 502.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:69:0,69,693
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7 124732203 7:124732203_G/A G A 547.68 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,111,1114
7 12575398 7:12575398_G/A G A 572.68 PASS . GT:AD:DP:GQ:PL 0/0:20,0:20:60:0,60,675
7 135846868 7:135846868_G/C G C 353.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:66:0,66,750
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7 158523448 7:158523448_T/G T G 606.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,102,1128
7 16407787 7:16407787_C/T C T 712.68 PASS . GT:AD:DP:GQ:PL 0/0:22,0:22:63:0,63,706
7 18585328 7:18585328_G/A G A 310.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:90:0,90,991
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7 42395311 7:42395311_C/A C A 319.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:81:0,81,894
7 4600708 7:4600708_G/A G A 553.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:81:0,81,906
7 47936320 7:47936320_G/A G A 500.68 PASS . GT:AD:DP:GQ:PL 0/0:41,0:41:99:0,120,1196
7 50066859 7:50066859_T/G T G 360.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:69:0,69,775
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7 55544611 7:55544611_G/A G A 261.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:84:0,84,891
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7 57856930 7:57856930_C/T C T 320.68 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,123,1282
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7 80442640 7:80442640_A/G A G 567.68 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,111,1272
7 83400137 7:83400137_C/T C T 311.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:69:0,69,730
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7 96387674 7:96387674_G/A G A 759.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,105,1168
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8 112732131 8:112732131_G/T G T 370.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:90:0,90,1005
8 112978042 8:112978042_G/T G T 462.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:81:0,81,908
8 113539603 8:113539603_A/T A T 506.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:81:0,81,894
8 116383058 8:116383058_C/T C T 287.68 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:75:0,75,748
8 116446719 8:116446719_C/T C T 400.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:96:0,96,1055
8 123967933 8:123967933_G/A G A 442.68 PASS . GT:AD:DP:GQ:PL 0/0:20,0:20:51:0,51,570
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8 5481284 8:5481284_G/T G T 265.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:90:0,90,920
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8 60440589 8:60440589_G/A G A 554.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:78:0,78,812
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8 75847309 8:75847309_G/A G A 414.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:96:0,96,953
8 77334928 8:77334928_G/A G A 395.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:25:72:0,72,798
8 86283710 8:86283710_C/T C T 197.68 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,108,1236
8 88941694 8:88941694_C/T C T 235.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:84:0,84,880
8 92719794 8:92719794_G/T G T 156.68 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:87:0,87,956
9 1106320 9:1106320_A/T A T 491.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:81:0,81,883
9 110790862 9:110790862_C/A C A 490.68 PASS . GT:AD:DP:GQ:PL 0/0:23,0:23:69:0,69,768
9 11280389 9:11280389_T/A T A 377.68 PASS . GT:AD:DP:GQ:PL 0/0:30,0:31:87:0,87,956
9 120034891 9:120034891_G/A G A 355.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:75:0,75,760
9 121868207 9:121868207_C/T C T 384.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:87:0,87,875
9 125323728 9:125323728_G/A G A 363.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:96:0,96,966
9 139019448 9:139019448_G/A G A 482.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:69:0,69,697
9 18605235 9:18605235_G/C G C 471.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:72:0,72,799
9 26383914 9:26383914_G/A G A 446.68 PASS . GT:AD:DP:GQ:PL 0/0:21,0:21:54:0,54,532
9 31058935 9:31058935_G/A G A 333.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:66:0,66,664
9 33262014 9:33262014_G/T G T 507.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:81:0,81,895
9 33353006 9:33353006_G/T G T 689.68 PASS . GT:AD:DP:GQ:PL 0/0:44,0:44:99:0,129,1429
9 44882393 9:44882393_G/A G A 342.69 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:93:0,93,930
9 4721501 9:4721501_C/A C A 191.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:69:0,69,738
9 6009279 9:6009279_G/A G A 438.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:25:69:0,69,758
9 71192790 9:71192790_C/A C A 514.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:69:0,69,762
9 74438387 9:74438387_G/A G A 428.68 PASS . GT:AD:DP:GQ:PL 0/0:22,0:22:63:0,63,693
9 77682064 9:77682064_C/T C T 376.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:35:93:0,93,942
9 81923447 9:81923447_G/A G A 313.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:63:0,63,634
9 8384410 9:8384410_A/G A G 602.68 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,111,1207
9 94910690 9:94910690_C/T C T 243.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:72:0,72,707
9 99331982 9:99331982_C/T C T 399.68 PASS . GT:AD:DP:GQ:PL 0/0:20,0:20:57:0,57,623
10 100404848 10:100404848_G/A G A 296.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:96:0,96,1074
10 104593101 10:104593101_G/A G A 446.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:34:90:0,90,892
10 108687088 10:108687088_T/C T C 545.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:93:0,93,1024
10 113446706 10:113446706_C/G C G 550.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:96:0,96,1044
10 134874227 10:134874227_G/A G A 495.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:78:0,78,809
10 4074379 10:4074379_A/G A G 348.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:72:0,72,778
10 44843250 10:44843250_C/T C T 371.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:90:0,90,889
10 50960202 10:50960202_G/A G A 233.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:90:0,90,918
10 63209064 10:63209064_G/A G A 236.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:69:0,69,694
10 67278220 10:67278220_G/A G A 366.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:78:0,78,799
10 74566657 10:74566657_C/A C A 461.68 PASS . GT:AD:DP:GQ:PL 0/0:38,0:38:99:0,111,1205
10 80171908 10:80171908_G/T G T 586.68 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,117,1273
10 8230949 10:8230949_C/T C T 190.68 PASS . GT:AD:DP:GQ:PL 0/0:23,0:25:60:0,60,634
10 9640809 10:9640809_C/T C T 501.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:29:75:0,75,766
10 97474746 10:97474746_G/C G C 500.68 PASS . GT:AD:DP:GQ:PL 0/0:21,0:21:63:0,63,703
11 101528706 11:101528706_C/T C T 381.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:78:0,78,774
11 105570719 11:105570719_T/C T C 355.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:75:0,75,826
11 105659167 11:105659167_G/A G A 311.68 PASS . GT:AD:DP:GQ:PL 0/0:22,0:22:63:0,63,607
11 108943168 11:108943168_G/T G T 415.68 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,114,1233
11 110839459 11:110839459_C/A C A 373.68 PASS . GT:AD:DP:GQ:PL 0/0:30,0:31:90:0,90,1003
11 114495650 11:114495650_G/A G A 326.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:90:0,90,1001
11 115706011 11:115706011_A/C A C 381.68 PASS . GT:AD:DP:GQ:PL 0/0:35,0:35:99:0,102,1116
11 126587433 11:126587433_G/A G A 402.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:96:0,96,967
11 1759513 11:1759513_T/A T A 470.68 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,105,1168
11 22095316 11:22095316_A/C A C 338.68 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,111,1220
11 29272248 11:29272248_G/T G T 283.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:72:0,72,791
11 29923688 11:29923688_A/G A G 529.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:75:0,75,829
11 4052559 11:4052559_G/A G A 440.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:78:0,78,866
11 40906614 11:40906614_G/T G T 387.68 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:84:0,84,942
11 45803404 11:45803404_C/T C T 349.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,99,974
11 47762871 11:47762871_G/A G A 244.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:96:0,96,1052
11 49573846 11:49573846_G/T G T 702.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:87:0,87,964
11 50157167 11:50157167_T/C T C 409.68 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,126,1368
11 56445545 11:56445545_T/A T A 291.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:87:0,87,955
11 68992773 11:68992773_G/A G A 380.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:75:0,75,810
11 74002638 11:74002638_A/G A G 315.68 PASS . GT:AD:DP:GQ:PL 0/0:20,0:20:54:0,54,605
11 87448340 11:87448340_G/A G A 588.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:78:0,78,782
11 90685276 11:90685276_C/A C A 396.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:90:0,90,1003
11 95560112 11:95560112_A/C A C 306.68 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,108,1215
11 97659838 11:97659838_C/T C T 369.68 PASS . GT:AD:DP:GQ:PL 0/0:21,0:21:63:0,63,708
11 99154353 11:99154353_T/C T C 441.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:72:0,72,797
12 100013760 12:100013760_G/A G A 314.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:87:0,87,983
12 102810145 12:102810145_G/T G T 321.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:87:0,87,942
12 102910254 12:102910254_C/A C A 393.68 PASS . GT:AD:DP:GQ:PL 0/0:41,0:41:99:0,117,1276
12 105405032 12:105405032_C/G C G 322.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:78:0,78,844
12 119922214 12:119922214_T/C T C 336.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:75:0,75,817
12 120051477 12:120051477_G/A G A 303.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:93:0,93,926
12 12236527 12:12236527_A/G A G 559.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:96:0,96,1076
12 124898050 12:124898050_C/T C T 292.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:90:0,90,917
12 126384682 12:126384682_G/T G T 375.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:93:0,93,1045
12 127210265 12:127210265_C/T C T 409.68 PASS . GT:AD:DP:GQ:PL 0/0:22,0:24:60:0,60,612
12 127759681 12:127759681_T/C T C 430.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:37:99:0,105,1165
12 128702960 12:128702960_C/A C A 389.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:69:0,69,777
12 131015578 12:131015578_T/C T C 367.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:87:0,87,974
12 13393963 12:13393963_G/A G A 231.68 PASS . GT:AD:DP:GQ:PL 0/0:20,0:20:54:0,54,534
12 22453033 12:22453033_A/T A T 487.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:87:0,87,969
12 22453035 12:22453035_T/A T A 456.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:84:0,84,945
12 38984743 12:38984743_C/A C A 353.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:84:0,84,915
12 47840156 12:47840156_T/C T C 1627.17 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:93:0,93,1041
12 47840182 12:47840182_A/T A T 1647.17 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:96:0,96,1069
12 54802096 12:54802096_A/G A G 340.68 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,114,1281
12 54992020 12:54992020_T/G T G 477.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:84:0,84,939
12 58071601 12:58071601_C/T C T 420.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:90:0,90,929
12 62727196 12:62727196_C/A C A 340.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:90:0,90,988
12 65294611 12:65294611_G/A G A 493.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:69:0,69,749
12 67172568 12:67172568_G/A G A 795.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:75:0,75,818
12 78789233 12:78789233_C/T C T 272.68 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:72:0,72,776
12 82704427 12:82704427_G/A G A 187.69 PASS . GT:AD:DP:GQ:PL 0/0:18,0:21:48:0,48,529
12 84535053 12:84535053_A/G A G 467.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:72:0,72,763
12 9073030 12:9073030_G/A G A 245.68 PASS . GT:AD:DP:GQ:PL 0/0:41,0:41:99:0,105,1072
12 91132715 12:91132715_A/T A T 385.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,105,1146
12 92930275 12:92930275_T/A T A 446.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:90:0,90,1004
12 98562354 12:98562354_G/T G T 402.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:81:0,81,902
12 99225614 12:99225614_G/A G A 511.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,105,1027
13 102100536 13:102100536_C/T C T 511.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:87:0,87,855
13 106246419 13:106246419_A/G A G 617.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:90:0,90,999
13 108119861 13:108119861_A/T A T 597.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:96:0,96,1038
13 26292286 13:26292286_G/A G A 737.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,102,1030
13 39091195 13:39091195_G/A G A 657.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:96:0,96,942
13 51608835 13:51608835_C/T C T 929.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:84:0,84,918
13 53912015 13:53912015_G/A G A 345.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:78:0,78,777
13 55079635 13:55079635_T/A T A 633.68 PASS . GT:AD:DP:GQ:PL 0/0:22,0:23:63:0,63,715
13 56955224 13:56955224_G/A G A 460.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:90:0,90,899
13 57965892 13:57965892_C/T C T 466.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:78:0,78,857
13 59031947 13:59031947_G/T G T 328.68 PASS . GT:AD:DP:GQ:PL 0/0:40,0:41:99:0,120,1326
13 62409526 13:62409526_T/G T G 1034.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:93:0,93,1028
13 64627508 13:64627508_C/T C T 275.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:87:0,87,982
13 83058449 13:83058449_G/A G A 665.68 PASS . GT:AD:DP:GQ:PL 0/0:22,0:22:60:0,60,617
13 86648325 13:86648325_C/T C T 762.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:84:0,84,882
13 90336558 13:90336558_T/C T C 496.69 PASS . GT:AD:DP:GQ:PL 0/0:23,0:24:42:0,42,409
14 101849070 14:101849070_G/T G T 166.68 PASS . GT:AD:DP:GQ:PL 0/0:21,0:21:57:0,57,611
14 103581302 14:103581302_C/T C T 531.68 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:78:0,78,871
14 21675772 14:21675772_A/G A G 325.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:81:0,81,908
14 31119979 14:31119979_G/A G A 594.68 PASS . GT:AD:DP:GQ:PL 0/0:21,0:21:54:0,54,598
14 49176278 14:49176278_G/C G C 419.68 PASS . GT:AD:DP:GQ:PL 0/0:35,0:35:99:0,102,1143
14 62677458 14:62677458_G/T G T 410.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:69:0,69,779
14 63186966 14:63186966_C/T C T 358.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:93:0,93,950
14 77846709 14:77846709_C/T C T 430.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:30:87:0,87,960
14 80788964 14:80788964_G/T G T 423.68 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,120,1335
14 82756065 14:82756065_G/T G T 150.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:93:0,93,1045
14 83035682 14:83035682_G/A G A 412.68 PASS . GT:AD:DP:GQ:PL 0/0:21,0:21:60:0,60,604
14 86872650 14:86872650_C/T C T 173.68 PASS . GT:AD:DP:GQ:PL 0/0:23,0:23:48:0,48,472
14 98047829 14:98047829_G/A G A 373.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:93:0,93,1020
14 98180101 14:98180101_T/G T G 404.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:87:0,87,964
15 26610425 15:26610425_C/T C T 272.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:96:0,96,962
15 34542963 15:34542963_C/A C A 439.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:87:0,87,963
15 70240638 15:70240638_C/T C T 463.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:96:0,96,1062
15 81969976 15:81969976_G/T G T 488.68 PASS . GT:AD:DP:GQ:PL 0/0:45,0:45:99:0,129,1412
15 84071165 15:84071165_G/A G A 291.68 PASS . GT:AD:DP:GQ:PL 0/0:41,0:41:99:0,111,1095
15 86437236 15:86437236_G/A G A 449.68 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:84:0,84,857
15 95058178 15:95058178_C/A C A 298.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:69:0,69,749
15 96064856 15:96064856_A/T A T 188.68 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,105,1172
16 13324144 16:13324144_G/T G T 257.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:75:0,75,830
16 15781237 16:15781237_C/T C T 385.68 PASS . GT:AD:DP:GQ:PL 0/0:41,0:41:99:0,114,1126
16 26105164 16:26105164_C/T C T 317.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:78:0,78,795
16 46913193 16:46913193_T/A T A 425.68 PASS . GT:AD:DP:GQ:PL 0/0:38,0:38:99:0,102,1181
16 54169192 16:54169192_C/T C T 508.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:33:90:0,90,967
16 59794921 16:59794921_C/T C T 549.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:75:0,75,820
16 65359475 16:65359475_C/T C T 556.68 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:84:0,84,843
16 68458680 16:68458680_C/A C A 356.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:84:0,84,943
16 7191424 16:7191424_G/A G A 465.68 PASS . GT:AD:DP:GQ:PL 0/0:48,0:48:99:0,141,1432
16 76263192 16:76263192_C/A C A 392.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:26:69:0,69,755
16 82374377 16:82374377_G/T G T 373.68 PASS . GT:AD:DP:GQ:PL 0/0:20,0:20:54:0,54,602
17 2387810 17:2387810_C/T C T 342.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:60:0,60,571
17 28820772 17:28820772_T/G T G 385.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:93:0,93,1055
17 32013098 17:32013098_G/A G A 413.68 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:87:0,87,853
17 39320277 17:39320277_G/A G A 311.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:78:0,78,855
17 51349250 17:51349250_C/T C T 336.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:72:0,72,778
17 54469617 17:54469617_C/T C T 473.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:72:0,72,727
17 56115296 17:56115296_G/A G A 365.68 PASS . GT:AD:DP:GQ:PL 0/0:22,0:22:63:0,63,622
17 57616658 17:57616658_C/T C T 515.68 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,105,1046
17 62192136 17:62192136_T/C T C 184.68 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,129,1428
17 63177710 17:63177710_A/G A G 628.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:93:0,93,1012
17 72225250 17:72225250_C/A C A 482.68 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,117,1298
18 11103894 18:11103894_G/A G A 491.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:69:0,69,696
18 11166335 18:11166335_G/A G A 271.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,99,975
18 22616714 18:22616714_C/T C T 467.68 PASS . GT:AD:DP:GQ:PL 0/0:30,0:31:84:0,84,848
18 25889153 18:25889153_A/G A G 156.68 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:87:0,87,986
18 35113058 18:35113058_C/T C T 523.68 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:72:0,72,795
18 36351534 18:36351534_G/C G C 295.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:81:0,81,903
18 37521336 18:37521336_C/T C T 479.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:78:0,78,761
18 40536123 18:40536123_G/T G T 382.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:78:0,78,857
18 52804157 18:52804157_G/A G A 557.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,105,1077
18 57092953 18:57092953_C/T C T 382.68 PASS . GT:AD:DP:GQ:PL 0/0:21,0:21:63:0,63,635
18 59673663 18:59673663_C/T C T 662.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,105,1181
18 61744170 18:61744170_G/T G T 614.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:90:0,90,1003
18 66067354 18:66067354_G/A G A 362.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:72:0,72,709
18 68624788 18:68624788_C/A C A 318.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,102,1131
18 70104157 18:70104157_G/T G T 228.68 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,111,1249
18 7852362 18:7852362_G/A G A 489.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:87:0,87,966
18 8335059 18:8335059_C/T C T 413.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,102,1007
19 10691927 19:10691927_C/T C T 649.68 PASS . GT:AD:DP:GQ:PL 0/0:38,0:38:99:0,108,1169
19 11383721 19:11383721_G/A G A 448.68 PASS . GT:AD:DP:GQ:PL 0/0:45,0:45:99:0,126,1401
19 14905254 19:14905254_A/G A G 272.68 PASS . GT:AD:DP:GQ:PL 0/0:38,0:38:99:0,105,1153
19 15669266 19:15669266_C/T C T 362.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:87:0,87,898
19 21688654 19:21688654_A/C A C 184.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:93:0,93,1021
19 30071266 19:30071266_G/A G A 247.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:87:0,87,885
19 30197158 19:30197158_C/A C A 415.68 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:81:0,81,882
19 40336133 19:40336133_C/A C A 549.68 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:87:0,87,967
19 54700024 19:54700024_C/T C T 334.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:69:0,69,733
19 5531073 19:5531073_G/A G A 508.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:33:90:0,90,919
20 23306946 20:23306946_G/A G A 462.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:75:0,75,740
20 31060961 20:31060961_T/A T A 529.68 PASS . GT:AD:DP:GQ:PL 0/0:21,0:21:60:0,60,655
20 43018556 20:43018556_T/G T G 470.68 PASS . GT:AD:DP:GQ:PL 0/0:21,0:21:57:0,57,626
20 53358024 20:53358024_C/T C T 336.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:72:0,72,722
20 58058096 20:58058096_C/T C T 638.68 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:66:0,66,741
21 16958692 21:16958692_T/G T G 429.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:90:0,90,973
21 20872459 21:20872459_C/T C T 433.68 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:90:0,90,1005
21 22752335 21:22752335_G/A G A 590.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:81:0,81,824
21 31774143 21:31774143_G/A G A 425.68 PASS . GT:AD:DP:GQ:PL 0/0:38,0:38:99:0,108,1083
21 33410269 21:33410269_G/A G A 406.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:93:0,93,944
21 36207235 21:36207235_G/T G T 390.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:28:69:0,69,701
21 39382023 21:39382023_A/G A G 178.68 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:78:0,78,866
21 44497064 21:44497064_A/G A G 385.68 PASS . GT:AD:DP:GQ:PL 0/0:23,0:23:69:0,69,753
21 45411294 21:45411294_G/A G A 379.68 PASS . GT:AD:DP:GQ:PL 0/0:20,0:20:54:0,54,542
22 17040719 22:17040719_C/A C A 359.68 PASS . GT:AD:DP:GQ:PL 0/0:35,0:36:99:0,99,1063
22 29974400 22:29974400_A/G A G 330.68 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,117,1280
22 41532798 22:41532798_G/A G A 595.68 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:81:0,81,904
22 44229894 22:44229894_G/A G A 345.68 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,108,1109
22 44240711 22:44240711_C/T C T 531.68 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:87:0,87,918
22 45638012 22:45638012_A/C A C 305.68 PASS . GT:AD:DP:GQ:PL 0/0:41,0:41:99:0,114,1295
22 46804146 22:46804146_G/A G A 364.68 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,105,1030
22 48357974 22:48357974_G/A G A 462.68 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,99,991
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