1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393
|
##fileformat=VCFv4.1
##fileDate=20210324
##reference=file:///data_fedor8/common_data/GATK_b37_bundle/human_g1k_v37.fasta
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=AD,Number=.,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth (reads with MQ=255 or with bad mates are filtered)">
##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
##FORMAT=<ID=PL,Number=G,Type=Integer,Description="Normalized, Phred-scaled likelihoods for genotypes as defined in the VCF specification">
##contig=<ID=1,length=249250621,assembly="hg19">
##contig=<ID=2,length=243199373,assembly="hg19">
##contig=<ID=3,length=198022430,assembly="hg19">
##contig=<ID=4,length=191154276,assembly="hg19">
##contig=<ID=5,length=180915260,assembly="hg19">
##contig=<ID=6,length=171115067,assembly="hg19">
##contig=<ID=7,length=159138663,assembly="hg19">
##contig=<ID=8,length=146364022,assembly="hg19">
##contig=<ID=9,length=141213431,assembly="hg19">
##contig=<ID=10,length=135534747,assembly="hg19">
##contig=<ID=11,length=135006516,assembly="hg19">
##contig=<ID=12,length=133851895,assembly="hg19">
##contig=<ID=13,length=115169878,assembly="hg19">
##contig=<ID=14,length=107349540,assembly="hg19">
##contig=<ID=15,length=102531392,assembly="hg19">
##contig=<ID=16,length=90354753,assembly="hg19">
##contig=<ID=17,length=81195210,assembly="hg19">
##contig=<ID=18,length=78077248,assembly="hg19">
##contig=<ID=19,length=59128983,assembly="hg19">
##contig=<ID=20,length=63025520,assembly="hg19">
##contig=<ID=21,length=48129895,assembly="hg19">
##contig=<ID=22,length=51304566,assembly="hg19">
##contig=<ID=X,length=155270560,assembly="hg19">
##contig=<ID=Y,length=59373566,assembly="hg19">
##contig=<ID=MT,length=16569,assembly="hg19">
##contig=<ID=GL000207.1,length=4262,assembly="hg19">
##contig=<ID=GL000226.1,length=15008,assembly="hg19">
##contig=<ID=GL000229.1,length=19913,assembly="hg19">
##contig=<ID=GL000231.1,length=27386,assembly="hg19">
##contig=<ID=GL000210.1,length=27682,assembly="hg19">
##contig=<ID=GL000239.1,length=33824,assembly="hg19">
##contig=<ID=GL000235.1,length=34474,assembly="hg19">
##contig=<ID=GL000201.1,length=36148,assembly="hg19">
##contig=<ID=GL000247.1,length=36422,assembly="hg19">
##contig=<ID=GL000245.1,length=36651,assembly="hg19">
##contig=<ID=GL000197.1,length=37175,assembly="hg19">
##contig=<ID=GL000203.1,length=37498,assembly="hg19">
##contig=<ID=GL000246.1,length=38154,assembly="hg19">
##contig=<ID=GL000249.1,length=38502,assembly="hg19">
##contig=<ID=GL000196.1,length=38914,assembly="hg19">
##contig=<ID=GL000248.1,length=39786,assembly="hg19">
##contig=<ID=GL000244.1,length=39929,assembly="hg19">
##contig=<ID=GL000238.1,length=39939,assembly="hg19">
##contig=<ID=GL000202.1,length=40103,assembly="hg19">
##contig=<ID=GL000234.1,length=40531,assembly="hg19">
##contig=<ID=GL000232.1,length=40652,assembly="hg19">
##contig=<ID=GL000206.1,length=41001,assembly="hg19">
##contig=<ID=GL000240.1,length=41933,assembly="hg19">
##contig=<ID=GL000236.1,length=41934,assembly="hg19">
##contig=<ID=GL000241.1,length=42152,assembly="hg19">
##contig=<ID=GL000243.1,length=43341,assembly="hg19">
##contig=<ID=GL000242.1,length=43523,assembly="hg19">
##contig=<ID=GL000230.1,length=43691,assembly="hg19">
##contig=<ID=GL000237.1,length=45867,assembly="hg19">
##contig=<ID=GL000233.1,length=45941,assembly="hg19">
##contig=<ID=GL000204.1,length=81310,assembly="hg19">
##contig=<ID=GL000198.1,length=90085,assembly="hg19">
##contig=<ID=GL000208.1,length=92689,assembly="hg19">
##contig=<ID=GL000191.1,length=106433,assembly="hg19">
##contig=<ID=GL000227.1,length=128374,assembly="hg19">
##contig=<ID=GL000228.1,length=129120,assembly="hg19">
##contig=<ID=GL000214.1,length=137718,assembly="hg19">
##contig=<ID=GL000221.1,length=155397,assembly="hg19">
##contig=<ID=GL000209.1,length=159169,assembly="hg19">
##contig=<ID=GL000218.1,length=161147,assembly="hg19">
##contig=<ID=GL000220.1,length=161802,assembly="hg19">
##contig=<ID=GL000213.1,length=164239,assembly="hg19">
##contig=<ID=GL000211.1,length=166566,assembly="hg19">
##contig=<ID=GL000199.1,length=169874,assembly="hg19">
##contig=<ID=GL000217.1,length=172149,assembly="hg19">
##contig=<ID=GL000216.1,length=172294,assembly="hg19">
##contig=<ID=GL000215.1,length=172545,assembly="hg19">
##contig=<ID=GL000205.1,length=174588,assembly="hg19">
##contig=<ID=GL000219.1,length=179198,assembly="hg19">
##contig=<ID=GL000224.1,length=179693,assembly="hg19">
##contig=<ID=GL000223.1,length=180455,assembly="hg19">
##contig=<ID=GL000195.1,length=182896,assembly="hg19">
##contig=<ID=GL000212.1,length=186858,assembly="hg19">
##contig=<ID=GL000222.1,length=186861,assembly="hg19">
##contig=<ID=GL000200.1,length=187035,assembly="hg19">
##contig=<ID=GL000193.1,length=189789,assembly="hg19">
##contig=<ID=GL000194.1,length=191469,assembly="hg19">
##contig=<ID=GL000225.1,length=211173,assembly="hg19">
##contig=<ID=GL000192.1,length=547496,assembly="hg19">
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT C30913DBiopsy
1 102208628 1:102208628_T/C T C 624.57 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,117,1355
1 10956446 1:10956446_T/G T G 1691.17 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:84:0,84,991
1 154487852 1:154487852_C/A C A 1971.17 PASS . GT:AD:DP:GQ:PL 0/0:20,0:20:57:0,57,688
1 163342067 1:163342067_C/G C G 2007.17 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,126,1497
1 189855215 1:189855215_A/G A G 1775.17 PASS . GT:AD:DP:GQ:PL 0/0:58,0:58:99:0,175,2051
1 225003817 1:225003817_T/C T C 1529.17 PASS . GT:AD:DP:GQ:PL 0/0:52,0:52:99:0,156,1815
1 228723255 1:228723255_C/T C T 2002.17 PASS . GT:AD:DP:GQ:PL 0/0:46,0:46:99:0,135,1571
1 2926987 1:2926987_T/C T C 108.57 PASS . GT:AD:DP:GQ:PL 0/0:24,0:25:63:0,63,695
1 32004183 1:32004183_G/A G A 1922.17 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:81:0,81,935
1 40837978 1:40837978_C/A C A 1747.17 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:93:0,93,1003
1 71213008 1:71213008_A/G A G 2335.17 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,114,1314
1 75435630 1:75435630_T/C T C 1693.17 PASS . GT:AD:DP:GQ:PL 0/0:47,0:47:99:0,138,1597
1 81590331 1:81590331_C/A C A 141.57 PASS . GT:AD:DP:GQ:PL 0/0:38,0:38:99:0,111,1297
1 83125747 1:83125747_G/T G T 200.57 PASS . GT:AD:DP:GQ:PL 0/0:50,0:50:99:0,147,1717
1 84088830 1:84088830_G/A G A 1299.17 PASS . GT:AD:DP:GQ:PL 0/0:49,0:49:99:0,141,1642
1 85390338 1:85390338_T/C T C 1458.17 PASS . GT:AD:DP:GQ:PL 0/0:35,0:35:99:0,105,1185
1 88227989 1:88227989_C/T C T 1197.17 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:93:0,93,1106
1 96956287 1:96956287_A/T A T 2342.17 PASS . GT:AD:DP:GQ:PL 0/0:49,0:50:99:0,147,1751
2 105158010 2:105158010_C/A C A 406.57 PASS . GT:AD:DP:GQ:PL 0/0:51,0:51:99:0,153,1814
2 107628312 2:107628312_G/A G A 1573.17 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:90:0,90,1040
2 125916321 2:125916321_G/T G T 671.57 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:99:0,99,1167
2 126623783 2:126623783_T/C T C 1414.17 PASS . GT:AD:DP:GQ:PL 0/0:47,0:47:99:0,141,1624
2 127009701 2:127009701_G/A G A 2203.17 PASS . GT:AD:DP:GQ:PL 0/0:51,0:51:99:0,153,1798
2 129906853 2:129906853_C/A C A 1632.17 PASS . GT:AD:DP:GQ:PL 0/0:55,0:55:99:0,159,1861
2 131104809 2:131104809_A/T A T 185.57 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,117,1301
2 13739672 2:13739672_T/A T A 1981.17 PASS . GT:AD:DP:GQ:PL 0/0:53,0:53:99:0,153,1767
2 141967200 2:141967200_C/A C A 1843.17 PASS . GT:AD:DP:GQ:PL 0/0:49,0:49:99:0,147,1742
2 143185633 2:143185633_G/A G A 2184.17 PASS . GT:AD:DP:GQ:PL 0/0:60,0:60:99:0,181,2096
2 162122518 2:162122518_A/C A C 154.57 PASS . GT:AD:DP:GQ:PL 0/0:35,0:35:99:0,105,1166
2 168900595 2:168900595_T/G T G 1880.17 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,108,1222
2 185598291 2:185598291_T/G T G 1485.17 PASS . GT:AD:DP:GQ:PL 0/0:46,0:46:99:0,138,1568
2 185643858 2:185643858_C/T C T 1698.17 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:96:0,96,1148
2 191242957 2:191242957_T/C T C 102.57 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:87:0,87,883
2 199591369 2:199591369_T/C T C 1904.17 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,117,1325
2 204101072 2:204101072_A/C A C 125.56 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:75:0,75,818
2 212894104 2:212894104_C/T C T 2034.17 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:90:0,90,1037
2 22026917 2:22026917_C/G C G 2135.17 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:78:0,78,894
2 223733524 2:223733524_T/C T C 1580.17 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,111,1319
2 227720180 2:227720180_A/G A G 1868.17 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,114,1293
2 233395674 2:233395674_T/C T C 1635.17 PASS . GT:AD:DP:GQ:PL 0/0:20,0:20:60:0,60,706
2 31813647 2:31813647_C/G C G 1894.17 PASS . GT:AD:DP:GQ:PL 0/0:44,0:44:99:0,132,1555
2 34065590 2:34065590_T/C T C 281.03 PASS . GT:AD:DP:GQ:PL 0/0:45,0:45:99:0,132,1459
2 40518198 2:40518198_G/A G A 2447.17 PASS . GT:AD:DP:GQ:PL 0/0:57,0:57:99:0,165,1918
2 41850838 2:41850838_T/C T C 1966.17 PASS . GT:AD:DP:GQ:PL 0/0:42,0:42:99:0,123,1337
2 5608814 2:5608814_C/T C T 2192.17 PASS . GT:AD:DP:GQ:PL 0/0:57,0:57:99:0,169,1984
2 58131630 2:58131630_A/C A C 2124.17 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,129,1468
2 64596136 2:64596136_G/C G C 1310.17 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:72:0,72,819
2 78346928 2:78346928_A/T A T 1800.17 PASS . GT:AD:DP:GQ:PL 0/0:42,0:43:99:0,123,1371
2 86472492 2:86472492_G/A G A 176.5 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:87:0,87,1031
3 110156325 3:110156325_C/A C A 859.57 PASS . GT:AD:DP:GQ:PL 0/0:38,0:38:99:0,111,1284
3 112922808 3:112922808_C/A C A 2155.17 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,111,1261
3 116967536 3:116967536_G/T G T 1867.17 PASS . GT:AD:DP:GQ:PL 0/0:50,0:50:99:0,150,1776
3 119429613 3:119429613_A/G A G 2238.17 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,120,1402
3 121754142 3:121754142_G/A G A 1766.17 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:93:0,93,1111
3 127018549 3:127018549_G/A G A 2208.17 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,111,1270
3 162099570 3:162099570_T/C T C 259.68 PASS . GT:AD:DP:GQ:PL 0/0:42,0:42:93:0,93,988
3 162927384 3:162927384_T/C T C 2061.17 PASS . GT:AD:DP:GQ:PL 0/0:48,0:48:99:0,141,1575
3 165459168 3:165459168_C/T C T 2187.17 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:99:0,99,1158
3 168614257 3:168614257_C/T C T 252.36 PASS . GT:AD:DP:GQ:PL 0/0:35,0:35:99:0,105,1211
3 171421760 3:171421760_G/T G T 2217.17 PASS . GT:AD:DP:GQ:PL 0/0:38,0:38:99:0,114,1328
3 173782877 3:173782877_A/G A G 1854.17 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,117,1331
3 178038337 3:178038337_G/A G A 2054.17 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,105,1235
3 180824093 3:180824093_C/T C T 1730.17 PASS . GT:AD:DP:GQ:PL 0/0:42,0:42:99:0,120,1300
3 20743411 3:20743411_C/G C G 1739.17 PASS . GT:AD:DP:GQ:PL 0/0:42,0:42:99:0,123,1432
3 25822059 3:25822059_T/A T A 2023.17 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,111,1297
3 34649057 3:34649057_G/C G C 1893.17 PASS . GT:AD:DP:GQ:PL 0/0:65,0:65:99:0,196,2284
3 63896590 3:63896590_T/G T G 1537.17 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:87:0,87,1011
3 67295460 3:67295460_A/G A G 1463.17 PASS . GT:AD:DP:GQ:PL 0/0:41,0:41:99:0,123,1438
3 77382952 3:77382952_G/A G A 1890.17 PASS . GT:AD:DP:GQ:PL 0/0:44,0:44:99:0,129,1512
3 79879229 3:79879229_A/G A G 2215.17 PASS . GT:AD:DP:GQ:PL 0/0:47,0:47:99:0,141,1627
3 83398014 3:83398014_A/G A G 2318.17 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,114,1320
3 83636083 3:83636083_C/A C A 1312.17 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,129,1514
3 84589554 3:84589554_G/A G A 2029.17 PASS . GT:AD:DP:GQ:PL 0/0:53,0:53:99:0,159,1928
3 88002507 3:88002507_A/C A C 2426.17 PASS . GT:AD:DP:GQ:PL 0/0:50,0:50:99:0,150,1706
3 88410279 3:88410279_A/G A G 2118.17 PASS . GT:AD:DP:GQ:PL 0/0:48,0:48:99:0,144,1639
3 93587593 3:93587593_C/T C T 1445.17 PASS . GT:AD:DP:GQ:PL 0/0:34,0:35:99:0,102,1184
3 93954166 3:93954166_G/C G C 207.55 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:75:0,75,840
3 95701521 3:95701521_C/T C T 864.57 PASS . GT:AD:DP:GQ:PL 0/0:54,0:54:99:0,162,1870
3 97041704 3:97041704_C/T C T 1457.17 PASS . GT:AD:DP:GQ:PL 0/0:48,0:48:99:0,144,1501
4 106296345 4:106296345_G/C G C 1808.17 PASS . GT:AD:DP:GQ:PL 0/0:48,0:48:99:0,144,1675
4 123635361 4:123635361_G/A G A 605.57 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,117,1361
4 131315553 4:131315553_C/A C A 1746.17 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,108,1265
4 13491000 4:13491000_C/T C T 1416.17 PASS . GT:AD:DP:GQ:PL 0/0:22,0:22:63:0,63,671
4 135219264 4:135219264_A/G A G 1060.57 PASS . GT:AD:DP:GQ:PL 0/0:51,0:51:99:0,153,1722
4 146473967 4:146473967_A/G A G 2116.17 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,117,1351
4 148940454 4:148940454_T/G T G 2014.17 PASS . GT:AD:DP:GQ:PL 0/0:49,0:49:99:0,147,1657
4 161627698 4:161627698_G/A G A 779.57 PASS . GT:AD:DP:GQ:PL 0/0:57,0:57:99:0,172,2054
4 164710211 4:164710211_C/A C A 1205.17 PASS . GT:AD:DP:GQ:PL 0/0:41,0:41:99:0,120,1397
4 166377468 4:166377468_C/A C A 119.57 PASS . GT:AD:DP:GQ:PL 0/0:42,0:42:99:0,126,1476
4 176945357 4:176945357_A/G A G 1671.17 PASS . GT:AD:DP:GQ:PL 0/0:41,0:41:99:0,123,1409
4 180609610 4:180609610_A/C A C 2038.17 PASS . GT:AD:DP:GQ:PL 0/0:54,0:54:99:0,162,1822
4 189604186 4:189604186_C/T C T 1877.17 PASS . GT:AD:DP:GQ:PL 0/0:51,0:51:99:0,150,1712
4 31282227 4:31282227_A/T A T 229.56 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,129,1501
4 31924106 4:31924106_T/C T C 1761.17 PASS . GT:AD:DP:GQ:PL 0/0:53,0:53:99:0,159,1730
4 32453163 4:32453163_A/G A G 2160.17 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,117,1374
4 42835916 4:42835916_T/G T G 1593.17 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,129,1460
4 4517794 4:4517794_T/G T G 2143.17 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:90:0,90,1043
4 47813068 4:47813068_G/A G A 2118.17 PASS . GT:AD:DP:GQ:PL 0/0:42,0:42:99:0,126,1453
4 64343426 4:64343426_A/G A G 2235.17 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,114,1324
4 66192865 4:66192865_A/G A G 1907.17 PASS . GT:AD:DP:GQ:PL 0/0:49,0:49:99:0,147,1688
4 88152809 4:88152809_C/T C T 1486.17 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:87:0,87,903
4 89903074 4:89903074_A/T A T 2031.17 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,102,1181
4 9091948 4:9091948_G/A G A 1531.17 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,111,1288
5 104489489 5:104489489_A/G A G 1967.17 PASS . GT:AD:DP:GQ:PL 0/0:56,0:56:99:0,159,1872
5 147443636 5:147443636_T/G T G 1682.17 PASS . GT:AD:DP:GQ:PL 0/0:47,0:47:99:0,141,1663
5 153149865 5:153149865_C/T C T 2223.17 PASS . GT:AD:DP:GQ:PL 0/0:38,0:38:99:0,114,1336
5 154480691 5:154480691_A/G A G 1569.17 PASS . GT:AD:DP:GQ:PL 0/0:44,0:44:99:0,132,1517
5 156424106 5:156424106_C/T C T 1417.17 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,114,1313
5 161273709 5:161273709_A/G A G 1944.17 PASS . GT:AD:DP:GQ:PL 0/0:38,0:38:99:0,114,1300
5 163154983 5:163154983_T/A T A 2556.42 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,99,1112
5 165043501 5:165043501_A/G A G 1810.17 PASS . GT:AD:DP:GQ:PL 0/0:56,0:56:99:0,168,1940
5 166558772 5:166558772_A/T A T 1988.17 PASS . GT:AD:DP:GQ:PL 0/0:38,0:38:99:0,111,1299
5 25284726 5:25284726_C/A C A 612.57 PASS . GT:AD:DP:GQ:PL 0/0:53,0:53:99:0,156,1854
5 41622671 5:41622671_A/G A G 2220.17 PASS . GT:AD:DP:GQ:PL 0/0:52,0:52:99:0,156,1776
5 5879550 5:5879550_G/A G A 2055.17 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:93:0,93,1070
5 68489085 5:68489085_A/G A G 2232.17 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,108,1250
5 78092961 5:78092961_A/C A C 1385.18 PASS . GT:AD:DP:GQ:PL 0/0:22,0:22:66:0,66,757
5 89626653 5:89626653_C/T C T 2291.17 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:99:0,99,1152
5 98021182 5:98021182_A/G A G 137.07 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:75:0,75,783
6 103227236 6:103227236_C/T C T 2052.17 PASS . GT:AD:DP:GQ:PL 0/0:44,0:44:99:0,132,1406
6 104089038 6:104089038_T/C T C 1722.17 PASS . GT:AD:DP:GQ:PL 0/0:58,0:58:99:0,172,2011
6 104409564 6:104409564_T/C T C 2269.17 PASS . GT:AD:DP:GQ:PL 0/0:42,0:42:99:0,126,1432
6 115782397 6:115782397_C/G C G 1473.17 PASS . GT:AD:DP:GQ:PL 0/0:56,0:56:99:0,168,1962
6 123147977 6:123147977_A/G A G 1794.17 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:93:0,93,1053
6 123260381 6:123260381_A/C A C 1614.17 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:93:0,93,1061
6 131681783 6:131681783_T/A T A 1844.17 PASS . GT:AD:DP:GQ:PL 0/0:55,0:55:99:0,162,1867
6 141432714 6:141432714_C/A C A 767.57 PASS . GT:AD:DP:GQ:PL 0/0:45,0:45:99:0,135,1572
6 154295986 6:154295986_G/C G C 2274.17 PASS . GT:AD:DP:GQ:PL 0/0:41,0:41:99:0,123,1299
6 157534262 6:157534262_A/G A G 1520.17 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,102,1182
6 168271795 6:168271795_G/C G C 222.08 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:57:0,57,637
6 16882574 6:16882574_G/A G A 2531.17 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,111,1300
6 58596885 6:58596885_T/C T C 1010.17 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,129,1499
6 71831036 6:71831036_C/G C G 1952.17 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,129,1494
6 71983495 6:71983495_G/C G C 1853.17 PASS . GT:AD:DP:GQ:PL 0/0:66,0:67:99:0,193,2250
6 76234139 6:76234139_G/A G A 277.25 PASS . GT:AD:DP:GQ:PL 0/0:65,0:65:99:0,193,2197
6 87268815 6:87268815_C/T C T 1974.17 PASS . GT:AD:DP:GQ:PL 0/0:66,0:66:99:0,199,2301
6 9518978 6:9518978_C/A C A 129.78 PASS . GT:AD:DP:GQ:PL 0/0:38,0:38:99:0,114,1302
7 105146399 7:105146399_T/G T G 1731.17 PASS . GT:AD:DP:GQ:PL 0/0:42,0:42:99:0,126,1435
7 105443604 7:105443604_C/T C T 2104.17 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,102,1165
7 109165152 7:109165152_C/T C T 1586.17 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:93:0,93,1086
7 111549020 7:111549020_C/T C T 1474.17 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,108,1252
7 114631903 7:114631903_A/G A G 1440.17 PASS . GT:AD:DP:GQ:PL 0/0:42,0:42:99:0,117,1339
7 121507063 7:121507063_G/A G A 2308.17 PASS . GT:AD:DP:GQ:PL 0/0:44,0:44:99:0,123,1335
7 134736551 7:134736551_C/A C A 637.57 PASS . GT:AD:DP:GQ:PL 0/0:67,0:67:99:0,199,2316
7 146391743 7:146391743_G/A G A 1848.17 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,123,1288
7 147271953 7:147271953_C/A C A 1867.17 PASS . GT:AD:DP:GQ:PL 0/0:46,0:46:99:0,129,1486
7 158563090 7:158563090_A/G A G 1499.19 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:84:0,84,967
7 19531248 7:19531248_C/T C T 1535.17 PASS . GT:AD:DP:GQ:PL 0/0:35,0:35:99:0,102,1113
7 19752706 7:19752706_C/T C T 2234.17 PASS . GT:AD:DP:GQ:PL 0/0:56,0:56:99:0,168,1960
7 23431551 7:23431551_A/G A G 2218.17 PASS . GT:AD:DP:GQ:PL 0/0:47,0:48:99:0,141,1631
7 50004619 7:50004619_T/G T G 2963.17 PASS . GT:AD:DP:GQ:PL 0/0:42,0:42:99:0,126,1473
7 56391705 7:56391705_C/G C G 2025.17 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,102,1167
7 64183797 7:64183797_C/T C T 782.57 PASS . GT:AD:DP:GQ:PL 0/0:47,0:47:99:0,138,1619
7 65294248 7:65294248_C/T C T 309.08 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,117,1266
7 95991469 7:95991469_T/C T C 887.57 PASS . GT:AD:DP:GQ:PL 0/0:61,0:61:99:0,184,2081
8 104674723 8:104674723_A/T A T 2159.17 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,129,1522
8 108939802 8:108939802_A/G A G 1438.17 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,108,1183
8 114264463 8:114264463_A/T A T 2222.17 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:93:0,93,1052
8 118253796 8:118253796_C/T C T 1840.17 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,120,1371
8 13730730 8:13730730_T/A T A 424.72 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:81:0,81,922
8 139958236 8:139958236_A/G A G 1788.17 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:96:0,96,1086
8 20427532 8:20427532_T/A T A 2589.42 PASS . GT:AD:DP:GQ:PL 0/0:46,0:46:99:0,135,1518
8 31001396 8:31001396_A/C A C 2252.17 PASS . GT:AD:DP:GQ:PL 0/0:47,0:47:99:0,141,1584
8 41159230 8:41159230_A/C A C 1504.17 PASS . GT:AD:DP:GQ:PL 0/0:40,0:41:99:0,120,1427
8 66054584 8:66054584_G/T G T 1502.17 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:90:0,90,1050
8 944588 8:944588_C/T C T 1719.17 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:96:0,96,1132
9 109911663 9:109911663_C/T C T 2327.17 PASS . GT:AD:DP:GQ:PL 0/0:50,0:50:99:0,150,1709
9 111697009 9:111697009_C/T C T 1704.17 PASS . GT:AD:DP:GQ:PL 0/0:20,0:20:57:0,57,687
9 112203706 9:112203706_T/G T G 111.33 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,105,1201
9 118843744 9:118843744_T/C T C 1714.17 PASS . GT:AD:DP:GQ:PL 0/0:57,0:57:99:0,171,1947
9 119599095 9:119599095_A/C A C 1894.17 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:96:0,96,1134
9 123950153 9:123950153_G/A G A 2313.17 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,120,1400
9 124916854 9:124916854_C/A C A 2278.17 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,111,1277
9 129023720 9:129023720_C/A C A 893.57 PASS . GT:AD:DP:GQ:PL 0/0:46,0:46:99:0,126,1480
9 132753390 9:132753390_T/G T G 1807.17 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:78:0,78,882
9 13798608 9:13798608_A/C A C 1444.17 PASS . GT:AD:DP:GQ:PL 0/0:35,0:35:99:0,99,1122
9 21729671 9:21729671_G/A G A 1638.17 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,117,1369
9 46767526 9:46767526_A/C A C 1069.17 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:84:0,84,878
9 76737283 9:76737283_T/G T G 680.57 PASS . GT:AD:DP:GQ:PL 0/0:38,0:39:99:0,114,1364
10 106498647 10:106498647_G/T G T 1241.57 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:87:0,87,1005
10 112767721 10:112767721_C/G C G 2436.17 PASS . GT:AD:DP:GQ:PL 0/0:67,0:67:99:0,193,2245
10 113038882 10:113038882_A/G A G 159.61 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:60:0,60,556
10 1147555 10:1147555_G/T G T 1787.17 PASS . GT:AD:DP:GQ:PL 0/0:23,0:23:69:0,69,823
10 19899561 10:19899561_A/G A G 1758.17 PASS . GT:AD:DP:GQ:PL 0/0:50,0:50:99:0,144,1687
10 2984732 10:2984732_C/T C T 1707.17 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:90:0,90,1014
10 48507814 10:48507814_A/T A T 1865.17 PASS . GT:AD:DP:GQ:PL 0/0:42,0:42:99:0,126,1504
10 5388184 10:5388184_C/T C T 2250.17 PASS . GT:AD:DP:GQ:PL 0/0:46,0:46:99:0,135,1544
10 58332306 10:58332306_T/A T A 814.57 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:93:0,93,1064
10 6403981 10:6403981_C/T C T 1499.17 PASS . GT:AD:DP:GQ:PL 0/0:41,0:41:99:0,120,1402
10 65297033 10:65297033_G/A G A 697.57 PASS . GT:AD:DP:GQ:PL 0/0:48,0:48:99:0,144,1634
10 73905020 10:73905020_T/C T C 2206.17 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,129,1443
10 78508583 10:78508583_T/C T C 1752.17 PASS . GT:AD:DP:GQ:PL 0/0:41,0:41:99:0,123,1388
10 86212175 10:86212175_T/G T G 2592.17 PASS . GT:AD:DP:GQ:PL 0/0:42,0:42:99:0,126,1451
10 87548616 10:87548616_T/C T C 823.57 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:87:0,87,977
10 91580386 10:91580386_G/A G A 1611.17 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:75:0,75,850
10 91919182 10:91919182_C/T C T 284.54 PASS . GT:AD:DP:GQ:PL 0/0:20,0:20:57:0,57,599
10 91919191 10:91919191_C/G C G 258.54 PASS . GT:AD:DP:GQ:PL 0/0:21,0:21:63:0,63,758
10 93065218 10:93065218_G/T G T 2139.17 PASS . GT:AD:DP:GQ:PL 0/0:51,0:51:99:0,153,1751
10 94052076 10:94052076_A/G A G 1335.17 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:84:0,84,989
11 102893238 11:102893238_G/T G T 2458.17 PASS . GT:AD:DP:GQ:PL 0/0:38,0:38:99:0,114,1329
11 113337642 11:113337642_A/G A G 1820.17 PASS . GT:AD:DP:GQ:PL 0/0:44,0:44:99:0,129,1520
11 121606575 11:121606575_T/C T C 198.03 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:66:0,66,634
11 131773854 11:131773854_A/G A G 1871.17 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:93:0,93,1108
11 133449166 11:133449166_G/A G A 1434.17 PASS . GT:AD:DP:GQ:PL 0/0:22,0:22:63:0,63,709
11 34031061 11:34031061_C/T C T 1066.17 PASS . GT:AD:DP:GQ:PL 0/0:25,0:25:72:0,72,829
11 34237157 11:34237157_C/T C T 1844.17 PASS . GT:AD:DP:GQ:PL 0/0:26,0:26:75:0,75,872
11 50691166 11:50691166_C/A C A 147.75 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:96:0,96,1117
11 7321487 11:7321487_A/T A T 1899.17 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:96:0,96,1111
11 78073281 11:78073281_C/T C T 1970.17 PASS . GT:AD:DP:GQ:PL 0/0:56,0:56:99:0,165,1906
11 84828172 11:84828172_C/T C T 1864.17 PASS . GT:AD:DP:GQ:PL 0/0:62,0:62:99:0,184,2132
11 88556801 11:88556801_T/C T C 1757.17 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,120,1349
11 98858479 11:98858479_C/A C A 1853.17 PASS . GT:AD:DP:GQ:PL 0/0:54,0:54:99:0,162,1873
12 107656126 12:107656126_A/C A C 2034.17 PASS . GT:AD:DP:GQ:PL 0/0:45,0:45:99:0,135,1575
12 110834179 12:110834179_C/T C T 1011.57 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:93:0,93,1074
12 111338138 12:111338138_G/A G A 2340.17 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,111,1187
12 16789260 12:16789260_G/A G A 1762.17 PASS . GT:AD:DP:GQ:PL 0/0:24,0:24:72:0,72,753
12 28313085 12:28313085_A/T A T 2087.17 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,129,1513
12 39610587 12:39610587_C/A C A 1737.17 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:99:0,99,1187
12 52910073 12:52910073_G/T G T 1935.17 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,102,1213
12 61873674 12:61873674_G/A G A 2208.17 PASS . GT:AD:DP:GQ:PL 0/0:41,0:41:99:0,120,1234
12 67421631 12:67421631_C/T C T 1862.17 PASS . GT:AD:DP:GQ:PL 0/0:35,0:35:99:0,105,1219
12 69909672 12:69909672_A/C A C 212.87 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:87:0,87,902
12 73324929 12:73324929_A/G A G 1785.17 PASS . GT:AD:DP:GQ:PL 0/0:47,0:47:99:0,141,1592
12 80811972 12:80811972_G/T G T 732.57 PASS . GT:AD:DP:GQ:PL 0/0:41,0:41:99:0,123,1427
12 81923181 12:81923181_C/T C T 725.57 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,117,1392
12 83198086 12:83198086_A/T A T 1196.17 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,117,1333
12 91561822 12:91561822_A/T A T 1671.17 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:78:0,78,911
12 96994772 12:96994772_A/G A G 1821.17 PASS . GT:AD:DP:GQ:PL 0/0:37,0:37:99:0,108,1233
12 97430678 12:97430678_T/G T G 158.97 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:87:0,87,949
13 104574502 13:104574502_T/A T A 1570.17 PASS . GT:AD:DP:GQ:PL 0/0:49,0:49:99:0,144,1635
13 110878894 13:110878894_A/G A G 801.57 PASS . GT:AD:DP:GQ:PL 0/0:50,0:50:99:0,150,1775
13 112627019 13:112627019_G/C G C 1931.17 PASS . GT:AD:DP:GQ:PL 0/0:38,0:38:99:0,114,1325
13 24592720 13:24592720_C/T C T 1709.17 PASS . GT:AD:DP:GQ:PL 0/0:35,0:35:99:0,105,1137
13 36451587 13:36451587_G/T G T 2800.17 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,117,1343
13 38933161 13:38933161_C/T C T 1774.17 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,123,1484
13 45214069 13:45214069_G/A G A 2448.17 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:84:0,84,999
13 47989060 13:47989060_T/C T C 2267.17 PASS . GT:AD:DP:GQ:PL 0/0:46,0:46:99:0,135,1549
13 53725639 13:53725639_C/T C T 846.57 PASS . GT:AD:DP:GQ:PL 0/0:38,0:38:99:0,114,1320
13 60156864 13:60156864_G/A G A 2284.17 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,117,1356
13 63311716 13:63311716_T/C T C 1672.17 PASS . GT:AD:DP:GQ:PL 0/0:56,0:56:99:0,165,1871
13 74913939 13:74913939_G/T G T 1921.17 PASS . GT:AD:DP:GQ:PL 0/0:54,0:54:99:0,162,1876
13 94069143 13:94069143_C/T C T 1024.57 PASS . GT:AD:DP:GQ:PL 0/0:55,0:55:99:0,156,1831
14 27914623 14:27914623_T/A T A 3553.42 PASS . GT:AD:DP:GQ:PL 0/0:52,0:52:99:0,156,1803
14 38716350 14:38716350_C/T C T 479.62 PASS . GT:AD:DP:GQ:PL 0/0:45,0:45:99:0,135,1551
14 49158605 14:49158605_A/G A G 1800.17 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,102,1116
14 60550280 14:60550280_C/T C T 2250.17 PASS . GT:AD:DP:GQ:PL 0/0:41,0:41:99:0,117,1375
14 60723228 14:60723228_A/G A G 1494.17 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,120,1435
14 62658603 14:62658603_T/A T A 1805.17 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:84:0,84,992
14 63589714 14:63589714_G/T G T 1507.17 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:84:0,84,970
14 81338503 14:81338503_C/T C T 2227.17 PASS . GT:AD:DP:GQ:PL 0/0:62,0:62:99:0,181,2087
14 94553200 14:94553200_T/G T G 1280.17 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,126,1485
14 99970689 14:99970689_T/A T A 1964.17 PASS . GT:AD:DP:GQ:PL 0/0:22,0:22:63:0,63,695
15 24841505 15:24841505_G/T G T 1735.17 PASS . GT:AD:DP:GQ:PL 0/0:60,0:60:99:0,178,2092
15 33525328 15:33525328_G/A G A 2062.17 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:99:0,99,1148
15 35759816 15:35759816_T/A T A 1723.17 PASS . GT:AD:DP:GQ:PL 0/0:49,0:49:99:0,147,1735
15 38421844 15:38421844_C/T C T 2082.17 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:99:0,99,1169
15 54155890 15:54155890_A/T A T 2177.17 PASS . GT:AD:DP:GQ:PL 0/0:51,0:51:99:0,153,1741
15 58736190 15:58736190_A/T A T 106.9 PASS . GT:AD:DP:GQ:PL 0/0:20,0:20:60:0,60,711
15 59356712 15:59356712_G/A G A 1149.21 PASS . GT:AD:DP:GQ:PL 0/0:22,0:22:63:0,63,709
15 83494363 15:83494363_G/A G A 1137.17 PASS . GT:AD:DP:GQ:PL 0/0:21,0:21:63:0,63,644
15 90298694 15:90298694_G/T G T 2045.17 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:90:0,90,1045
15 94463959 15:94463959_T/C T C 1494.17 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,102,1169
16 14734608 16:14734608_A/C A C 123.62 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:87:0,87,995
16 51744848 16:51744848_A/T A T 2189.17 PASS . GT:AD:DP:GQ:PL 0/0:55,0:55:99:0,156,1828
16 6013491 16:6013491_C/T C T 1989.17 PASS . GT:AD:DP:GQ:PL 0/0:47,0:47:99:0,138,1639
16 6907831 16:6907831_T/C T C 1914.17 PASS . GT:AD:DP:GQ:PL 0/0:46,0:46:99:0,135,1579
16 82346859 16:82346859_G/T G T 2011.17 PASS . GT:AD:DP:GQ:PL 0/0:34,0:34:99:0,102,1163
17 17883232 17:17883232_A/G A G 1743.17 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:87:0,87,994
17 31127001 17:31127001_A/C A C 1687.17 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:90:0,90,1009
17 31275310 17:31275310_C/T C T 1348.17 PASS . GT:AD:DP:GQ:PL 0/0:32,0:32:96:0,96,1131
17 43478003 17:43478003_G/A G A 2093.17 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:93:0,93,1006
17 53385088 17:53385088_T/C T C 1911.17 PASS . GT:AD:DP:GQ:PL 0/0:28,0:28:84:0,84,958
17 54942062 17:54942062_A/G A G 1815.17 PASS . GT:AD:DP:GQ:PL 0/0:50,0:50:99:0,147,1654
17 6009129 17:6009129_C/G C G 1660.17 PASS . GT:AD:DP:GQ:PL 0/0:31,0:31:93:0,93,1137
17 61297219 17:61297219_A/T A T 2041.17 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,117,1341
17 64296061 17:64296061_G/C G C 2135.17 PASS . GT:AD:DP:GQ:PL 0/0:40,0:40:99:0,120,1413
17 6846265 17:6846265_A/C A C 2034.17 PASS . GT:AD:DP:GQ:PL 0/0:39,0:39:99:0,117,1365
17 9288771 17:9288771_C/A C A 262.68 PASS . GT:AD:DP:GQ:PL 0/0:50,0:50:99:0,150,1692
18 22057361 18:22057361_A/G A G 1839.17 PASS . GT:AD:DP:GQ:PL 0/0:35,0:35:99:0,105,1188
18 23369763 18:23369763_C/T C T 2113.17 PASS . GT:AD:DP:GQ:PL 0/0:55,0:55:99:0,165,1912
18 29121751 18:29121751_A/G A G 1989.17 PASS . GT:AD:DP:GQ:PL 0/0:50,0:50:99:0,150,1751
18 37490002 18:37490002_C/T C T 1844.17 PASS . GT:AD:DP:GQ:PL 0/0:43,0:43:99:0,129,1512
18 43416587 18:43416587_G/A G A 1825.17 PASS . GT:AD:DP:GQ:PL 0/0:27,0:27:81:0,81,950
18 5690874 18:5690874_C/A C A 1805.17 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,105,1065
18 58908017 18:58908017_A/G A G 1761.17 PASS . GT:AD:DP:GQ:PL 0/0:50,0:50:99:0,150,1731
18 59831897 18:59831897_T/G T G 2181.17 PASS . GT:AD:DP:GQ:PL 0/0:50,0:50:99:0,147,1706
19 14886697 19:14886697_G/T G T 1216.18 PASS . GT:AD:DP:GQ:PL 0/0:22,0:23:54:0,54,598
19 56382919 19:56382919_A/T A T 376.55 PASS . GT:AD:DP:GQ:PL 0/0:36,0:36:99:0,105,1184
20 11035349 20:11035349_G/C G C 198.81 PASS . GT:AD:DP:GQ:PL 0/0:29,0:29:66:0,66,676
20 11493356 20:11493356_C/T C T 1019.17 PASS . GT:AD:DP:GQ:PL 0/0:30,0:30:87:0,87,968
20 15901867 20:15901867_G/A G A 935.57 PASS . GT:AD:DP:GQ:PL 0/0:33,0:33:99:0,99,1009
20 20797206 20:20797206_A/G A G 1703.17 PASS . GT:AD:DP:GQ:PL 0/0:47,0:47:99:0,141,1615
20 37437892 20:37437892_C/G C G 183.18 PASS . GT:AD:DP:GQ:PL 0/0:23,0:23:66:0,66,640
20 38395288 20:38395288_C/T C T 1891.17 PASS . GT:AD:DP:GQ:PL 0/0:48,0:48:99:0,141,1621
20 40383023 20:40383023_G/A G A 685.57 PASS . GT:AD:DP:GQ:PL 0/0:45,0:45:99:0,135,1561
21 24340726 21:24340726_G/C G C 1382.17 PASS . GT:AD:DP:GQ:PL 0/0:38,0:38:99:0,114,1341
21 29966508 21:29966508_T/C T C 2282.17 PASS . GT:AD:DP:GQ:PL 0/0:42,0:42:99:0,126,1427
21 32850740 21:32850740_C/A C A 1784.17 PASS . GT:AD:DP:GQ:PL 0/0:44,0:45:99:0,132,1496
22 29417782 22:29417782_T/C T C 1955.17 PASS . GT:AD:DP:GQ:PL 0/0:42,0:42:99:0,123,1428
22 41045713 22:41045713_G/A G A 975.18 PASS . GT:AD:DP:GQ:PL 0/0:23,0:23:66:0,66,765
|