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Source: r-bioc-rsamtools
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders: Andreas Tille <tille@debian.org>
Section: gnu-r
Testsuite: autopkgtest-pkg-r
Priority: optional
Build-Depends: debhelper-compat (= 13),
dh-r,
r-base-dev,
r-bioc-genomeinfodb,
r-bioc-genomicranges,
r-bioc-biostrings,
r-bioc-biocgenerics,
r-bioc-s4vectors,
r-bioc-iranges,
r-bioc-xvector,
r-bioc-zlibbioc,
r-cran-bitops,
r-bioc-biocparallel,
r-bioc-rhtslib (>= 2.99.1),
architecture-is-64-bit,
libcurl4-openssl-dev
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-rsamtools
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-rsamtools.git
Homepage: https://bioconductor.org/packages/Rsamtools/
Rules-Requires-Root: no
Package: r-bioc-rsamtools
Architecture: any
Depends: ${R:Depends},
${shlibs:Depends},
${misc:Depends}
Recommends: ${R:Recommends}
Suggests: ${R:Suggests}
Description: GNU R binary alignment (BAM), variant call (BCF), or tabix file import
This package provides an interface to the 'samtools', 'bcftools', and
'tabix' utilities for manipulating SAM (Sequence Alignment / Map),
binary variant call (BCF) and compressed indexed tab-delimited (tabix)
files.
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