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Source: r-bioc-rwikipathways
Section: gnu-r
Priority: optional
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders: Andreas Tille <tille@debian.org>
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-rwikipathways
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-rwikipathways.git
Homepage: https://bioconductor.org/packages/rWikiPathways/
Standards-Version: 4.7.0
Rules-Requires-Root: no
Build-Depends: debhelper-compat (= 13),
dh-r,
r-base-dev,
r-cran-httr,
r-cran-xml,
r-cran-rjson,
r-cran-data.table,
r-cran-rcurl,
r-cran-dplyr,
r-cran-tidyr,
r-cran-readr,
r-cran-stringr,
r-cran-purrr,
r-cran-lubridate
Testsuite: autopkgtest-pkg-r
Package: r-bioc-rwikipathways
Architecture: all
Depends: ${R:Depends},
${misc:Depends}
Recommends: ${R:Recommends}
Suggests: ${R:Suggests}
Description: GNU R client library for the WikiPathways API
WikiPathways is a well-known repository for biological pathways that
provides unique tools to the research community for content creation,
editing and utilization.
.
The package rWikiPathways leverages the WikiPathways API to
communicate between GNU R and WikiPathways, allowing any pathway to
be queried, interrogated and downloaded in both data and image formats.
Queries are typically performed based on "Xrefs", standardized
identifiers for genes, proteins and metabolites. Once you can
identified a pathway, you can use the WPID (WikiPathways identifier)
to make additional queries.
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