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Package: scater
Type: Package
Authors@R: c(
person("Davis", "McCarthy", role=c("aut"), email="davis@ebi.ac.uk"),
person("Kieran", "Campbell", role=c("aut"), email="kieran.campbell@sjc.ox.ac.uk"),
person("Aaron", "Lun", role = c("aut", "ctb"), email="infinite.monkeys.with.keyboards@gmail.com"),
person("Quin", "Wills", role=c("aut"), email="qilin@quinwills.net"),
person("Vladimir", "Kiselev", role=c("ctb"), email="vk6@sanger.ac.uk"),
person("Alan", "O'Callaghan", role=c("ctb", "cre"), email="alan.ocallaghan@outlook.com"))
Version: 1.18.3
Date: 2020-11-07
License: GPL-3
Title: Single-Cell Analysis Toolkit for Gene Expression Data in R
Description: A collection of tools for doing various analyses of
single-cell RNA-seq gene expression data, with a focus on
quality control and visualization.
Depends: SingleCellExperiment, ggplot2
Imports: stats, utils, methods, grid, gridExtra, Matrix, BiocGenerics,
S4Vectors, SummarizedExperiment, DelayedArray,
DelayedMatrixStats, BiocNeighbors, BiocSingular, BiocParallel,
scuttle, rlang, ggbeeswarm, viridis
Suggests: BiocStyle, biomaRt, cowplot, destiny, knitr, scRNAseq,
robustbase, rmarkdown, Rtsne, uwot, NMF, testthat, pheatmap,
Biobase
VignetteBuilder: knitr
biocViews: ImmunoOncology, SingleCell, RNASeq, QualityControl,
Preprocessing, Normalization, Visualization,
DimensionReduction, Transcriptomics, GeneExpression,
Sequencing, Software, DataImport, DataRepresentation,
Infrastructure, Coverage
Encoding: UTF-8
RoxygenNote: 7.1.1
URL: http://bioconductor.org/packages/scater/
BugReports: https://support.bioconductor.org/
git_url: https://git.bioconductor.org/packages/scater
git_branch: RELEASE_3_12
git_last_commit: a94e7f4
git_last_commit_date: 2020-11-07
Date/Publication: 2020-11-08
NeedsCompilation: no
Packaged: 2020-11-09 03:06:46 UTC; biocbuild
Author: Davis McCarthy [aut],
Kieran Campbell [aut],
Aaron Lun [aut, ctb],
Quin Wills [aut],
Vladimir Kiselev [ctb],
Alan O'Callaghan [ctb, cre]
Maintainer: Alan O'Callaghan <alan.ocallaghan@outlook.com>
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