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974f41b25e781f0d68df18319f8537a3 *DESCRIPTION
90e3978e2c260e253a5d980ffe4037fa *NAMESPACE
5701da991f3fadcda09139308d343416 *R/DM.R
0f916f9a2136e990e1f9788d1c7f21c0 *R/RcppExports.R
c2716c4a372620bc01162c4a3617c77a *R/buildSNNGraph.R
57d89ce19b02f81f606aca5198784f25 *R/clusterCells.R
e37663bfddeb363c9cf7505cf6cb82bb *R/combineBlocks.R
992839f1944b2866d038a24cd30c8ceb *R/combineMarkers.R
8e77cffb823fe5eec378120b2d68b849 *R/combinePValues.R
ff61151a1152896d5aaa173c8aa9cb19 *R/combineVar.R
7764486ee117666522df62bd30b42c3b *R/computeMinRank.R
ba8ae8bd13c9b2a73f823125c4902bf9 *R/computeSumFactors.R
2ce4dd22c48d50d76b75fd6c83eac73a *R/convertTo.R
f951fd02f1a86e1a6ccd1b528c2f399a *R/correlateGenes.R
8b216be30421f8191b883f6565e39398 *R/correlateNull.R
7d34f8d5e0fb9c457a9d5d20111945f9 *R/correlatePairs.R
d0ceb15048a29c001310e3412e013389 *R/cyclone.R
545dde876302491c7f7f413cc31802e7 *R/decideTestsPerLabel.R
c24a11d4d830768568f15b305b7dc588 *R/defunct.R
52b874a5a01ce1876124e27ca0331c63 *R/denoisePCA.R
3eb5d28524c101d45c4d22d599eeea22 *R/expandPairings.R
8302ac2816d1a90f65090a5b536ad385 *R/findMarkers.R
eed9116601f1aa40089acb0d563ca031 *R/fitTrendCV2.R
0fe471913e59f7016cc3005c79db262d *R/fitTrendPoisson.R
d871d9a5c7ba3b4a95ddec37b979c012 *R/fitTrendVar.R
4e1e6324358cd077e3e1ca0aaca648ef *R/fixedPCA.R
8ec8430b40668e2f8ae2ebaac6f3b9de *R/getClusteredPCs.R
11edf5510cac7dbd73948584fbda7948 *R/getMarkerEffects.R
6948b29c74f0f1131fca9713a381b9c8 *R/getTopHVGs.R
d90edcb81368a8873a77f3ab832a439f *R/getTopMarkers.R
b070bca62bd2e3ab6fc2b16e4829ed37 *R/modelGeneCV2.R
db3cc329d0e98b5966f140e3d6cd05ed *R/modelGeneCV2WithSpikes.R
8ff8adf85b6ceaa9324d8f068ba5ffec *R/modelGeneVar.R
9aaf65c35791e870b37c88817a83c837 *R/modelGeneVarByPoisson.R
939f79dcd204251f08bcfdc42711fd55 *R/modelGeneVarWithSpikes.R
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d055457b17254bd08aafad7e352f774e *R/namespace.R
8c1763090af1f2eb5dd4b5da120bcc0d *R/pairwiseBinom.R
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23c2c2804d1124c7f7af264198ec33b9 *R/pairwiseWilcox.R
b0ff5dd4ad0a85cc5d3a11efca8d20f2 *R/pseudoBulkDGE.R
befdf2331879bbadef2d226227a65805 *R/pseudoBulkSpecific.R
67c8abc31d6e0b2920561ac01f3b3a0c *R/quickCluster.R
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6c54343ee9440bb18df147a11972949f *R/rhoToPValue.R
d8676bd4c475f60f3bfc156ddf40d96e *R/sandbag.R
63d4047a1af982d3fe5a6897a4513d5b *R/scaledColRanks.R
8404184464e9f1b095967241f745847e *R/scoreMarkers.R
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2b905dcf90eb8191926369e44e1d17c7 *R/testLinearModel.R
08420353501e546f130e124b956bf8f6 *R/utils_markers.R
1a1ed0a8ec43f570c3e8a20180ab841d *R/utils_parallel.R
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035e65f84a9c4612816c23d452c7598c *R/utils_tricube.R
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bb3d2305b8c20a3cfb0ff663a25a01a9 *build/vignette.rds
6eb4a7547df54744f154b7a61db591e9 *inst/CITATION
e7faebeed33d991515a512fc6932e7eb *inst/NEWS.Rd
2e299e01f8733b22611cab49a20ed00a *inst/doc/scran.R
50461e72e69a4884a37cab04146d39f1 *inst/doc/scran.Rmd
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c954434649fc26ec82dbdfdbe2c3b61a *inst/exdata/mouse_cycle_markers.rds
cca5ba750c31f6cae559fe374e7f796c *man/DM.Rd
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4fa42bbda47ffa9767986dae7fa0655a *man/clusterCells.Rd
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952a80b9c8158839da355a1e8f852619 *man/computeMinRank.Rd
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1a1cf8ffc821b24e1dbde5ac908cd4ab *man/denoisePCA.Rd
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182d111f373aa439e2f058de3894c5c7 *man/fitTrendVar.Rd
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63db6d7644835804fb99553d838b339c *man/getTopHVGs.Rd
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c535bc095d64f2de16097049a88e2305 *man/logBH.Rd
5ba4a0bad03cff7ecf0a31d4bda4cedf *man/modelGeneCV2.Rd
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0faef1c4f22272428e36d2cf4565f1ce *man/modelGeneVar.Rd
432d74c6116bf830711631fb7838d0cf *man/modelGeneVarByPoisson.Rd
a44d69685c115fbc6a367c5fb4b44a34 *man/modelGeneVarWithSpikes.Rd
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b1f7365457f653db8b92ed4ff54a136f *man/pairwiseBinom.Rd
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e847f38840dc2dd41ce0e6e1a2728435 *man/pairwiseWilcox.Rd
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3eb910e9293bc58c26dde612139e959e *man/quickCluster.Rd
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beed8ea84fe3d307f53c3f8027a0dd49 *man/testLinearModel.Rd
3996e7c16bfb96fad295ee425815cb4d *src/Makevars
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57e0fe092e2581fc50cca47e638f3743 *src/cyclone_scores.cpp
1342338107f9ab937402c898283ea4ff *src/overlap_exprs.cpp
a2c3ae2835c4e83ae6d89957b85ec525 *src/rand_custom.cpp
fc5064df3766c63366ddf042123994ee *src/rand_custom.h
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1ea869e9065fbe43aaca61cfe7d6191c *tests/testthat/setup.R
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a488623e8efa9726e7ef2079d5984476 *tests/testthat/test-multi-markers.R
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b58c3296bb7d1497c944edcf6bace727 *vignettes/ref.bib
50461e72e69a4884a37cab04146d39f1 *vignettes/scran.Rmd
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