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r-bioc-scuttle 1.0.4%2Bdfsg-5
  • links: PTS, VCS
  • area: main
  • in suites: bullseye
  • size: 728 kB
  • sloc: cpp: 356; sh: 17; makefile: 2

Folder: man

d .. (parent)
- - rw-r--r-- 1,386 addPerCellQC.Rd
- - rw-r--r-- 8,898 aggregateAcrossCells.Rd
- - rw-r--r-- 1,997 aggregateAcrossFeatures.Rd
- - rw-r--r-- 3,245 calculateAverage.Rd
- - rw-r--r-- 2,279 calculateCPM.Rd
- - rw-r--r-- 1,610 calculateFPKM.Rd
- - rw-r--r-- 2,698 calculateTPM.Rd
- - rw-r--r-- 4,283 downsampleBatches.Rd
- - rw-r--r-- 3,289 downsampleMatrix.Rd
- - rw-r--r-- 2,504 fitLinearModel.Rd
- - rw-r--r-- 3,245 geometricSizeFactors.Rd
- - rw-r--r-- 5,724 isOutlier.Rd
- - rw-r--r-- 3,720 librarySizeFactors.Rd
- - rw-r--r-- 5,664 logNormCounts.Rd
- - rw-r--r-- 4,482 makePerCellDF.Rd
- - rw-r--r-- 2,905 makePerFeatureDF.Rd
- - rw-r--r-- 4,655 medianSizeFactors.Rd
- - rw-r--r-- 1,000 mockSCE.Rd
- - rw-r--r-- 7,820 normalizeCounts.Rd
- - rw-r--r-- 3,858 numDetectedAcrossCells.Rd
- - rw-r--r-- 3,083 numDetectedAcrossFeatures.Rd
- - rw-r--r-- 7,015 perCellQCMetrics.Rd
- - rw-r--r-- 4,059 perFeatureQCMetrics.Rd
- - rw-r--r-- 4,273 quickPerCellQC.Rd
- - rw-r--r-- 2,565 readSparseCounts.Rd
- - rw-r--r-- 787 scuttle-pkg.Rd
- - rw-r--r-- 647 scuttle-utils.Rd
- - rw-r--r-- 5,250 sumCountsAcrossCells.Rd
- - rw-r--r-- 4,524 sumCountsAcrossFeatures.Rd
- - rw-r--r-- 4,750 summarizeAssayByGroup.Rd
- - rw-r--r-- 1,097 uniquifyFeatureNames.Rd
- - rw-r--r-- 1,427 whichNonZero.Rd