File: Makevars.win

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r-bioc-shortread 1.32.0-1
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ZLIB_CFLAGS+=$(shell echo 'zlibbioc::pkgconfig("PKG_CFLAGS")'|\
    "${R_HOME}/bin/R" --vanilla --slave)
PKG_LIBS+=$(shell echo 'zlibbioc::pkgconfig("PKG_LIBS_shared")' |\
    "${R_HOME}/bin/R" --vanilla --slave)
%.o: %.c
	$(CC) $(ZLIB_CFLAGS) $(ALL_CPPFLAGS) $(ALL_CFLAGS) -c $< -o $@
%.o: %.cc
	$(CXX) $(ZLIB_CFLAGS) $(ALL_CPPFLAGS) $(ALL_CXXFLAGS) -c $< -o $@