File: AllGenerics.R

package info (click to toggle)
r-bioc-spatialexperiment 1.16.0%2Bds-2
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 1,648 kB
  • sloc: makefile: 2
file content (83 lines) | stat: -rw-r--r-- 2,533 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
# imgData methods --------------------------------------------------------------

#' @export
setGeneric("imgData", function(x) standardGeneric("imgData"))

#' @export
setGeneric("imgData<-", function(x, value) standardGeneric("imgData<-"))

#' @export
setGeneric("imgRaster", function(x, ...) standardGeneric("imgRaster"))

#' @export
setGeneric("imgRaster<-", function(x, value) standardGeneric("imgRaster<-"))

#' @export
setGeneric("imgSource", function(x, ...) standardGeneric("imgSource"))

#' @export
setGeneric("imgSource<-", function(x, value) standardGeneric("imgSource<-"))

#' @export
setGeneric("getImg", function(x, ...) standardGeneric("getImg"))

#' @export
setGeneric("addImg", function(x, ...) standardGeneric("addImg"))

#' @export
setGeneric("rmvImg", function(x, ...) standardGeneric("rmvImg"))

#' @export
setGeneric("rotateImg", function(x, ...) standardGeneric("rotateImg"))

#' @export
setGeneric("mirrorImg", function(x, ...) standardGeneric("mirrorImg"))

# SpatialExperiment methods ----------------------------------------------------

#' @export
setGeneric("spatialData", function(x, ...) standardGeneric("spatialData"))

#' @export
setGeneric("spatialData<-", function(x, value) standardGeneric("spatialData<-"))

#' @export
setGeneric("spatialDataNames", function(x) standardGeneric("spatialDataNames"))

#' @export
setGeneric("spatialDataNames<-", function(x, value) standardGeneric("spatialDataNames<-"))

#' @export
setGeneric("spatialCoords", function(x, ...) standardGeneric("spatialCoords"))

#' @export
setGeneric("spatialCoords<-", function(x, value) standardGeneric("spatialCoords<-"))

#' @export
setGeneric("spatialCoordsNames", function(x) standardGeneric("spatialCoordsNames"))

#' @export
setGeneric("spatialCoordsNames<-", function(x, value) standardGeneric("spatialCoordsNames<-"))

#' @export
setGeneric("scaleFactors", function(x, ...) standardGeneric("scaleFactors"))

#' @export
setGeneric("molecules", function(x, ...) standardGeneric("molecules"))

#' @export
setGeneric("molecules<-", function(x, ..., value) standardGeneric("molecules<-"))

# SpatialExperiment methods to rotate/mirror coordinates -----------------------

#' @export
setGeneric("rotateCoords", function(x, ...) standardGeneric("rotateCoords"))

#' @export
setGeneric("mirrorCoords", function(x, ...) standardGeneric("mirrorCoords"))

#' @export
setGeneric("rotateObject", function(x, ...) standardGeneric("rotateObject"))

#' @export
setGeneric("mirrorObject", function(x, ...) standardGeneric("mirrorObject"))