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\name{get_clusters}
\alias{\S4method{get_clusters}{STRINGdb}}
\title{
get_clusters
}
\description{
Returns a list of clusters of interacting proteins.
See the iGraph (http://igraph.sourceforge.net/) documentation for additional information on the algorithms.
}
\usage{
\S4method{get_clusters}{STRINGdb}(string_ids, algorithm="fastgreedy")
}
\arguments{
\item{string_ids}{
a vector of STRING identifiers.
}
\item{algorithm}{
algorithm to use for the clustering. You can choose between "fastgreedy", "walktrap", "spinglass" and "edge.betweenness").
}
}
\value{
list of clusters of interacting proteins.
}
\author{
Andrea Franceschini
}
|
