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% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/extensions-VCF.R
\name{align_breakpoints}
\alias{align_breakpoints}
\title{Adjusting the nominal position of a pair of partnered breakpoint.}
\usage{
align_breakpoints(
vcf,
align = c("centre"),
is_higher_breakend = names(vcf) < info(vcf)$PARID
)
}
\arguments{
\item{vcf}{A VCF object.}
\item{align}{The alignment type.}
\item{is_higher_breakend}{Breakpoint ID ordering.}
}
\value{
A VCF object with adjusted nominal positions.
}
\description{
Adjusting the nominal position of a pair of partnered breakpoint.
}
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