File: gridss-missingPartner.vcf

package info (click to toggle)
r-bioc-structuralvariantannotation 1.22.0%2Bds-2
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 1,576 kB
  • sloc: makefile: 2
file content (9 lines) | stat: -rw-r--r-- 534 bytes parent folder | download | duplicates (2) 
1
2
3
4
5
6
7
8
9
 
##fileformat=VCFv4.2
##INFO=<ID=MATEID,Number=.,Type=String,Description="ID of mate breakends">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##contig=<ID=chr1,length=249250621>
##contig=<ID=chr12,length=133851895>
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO
chr1	18992158	gridss2o	C	C[chr12:84963533[	55	.	SVTYPE=BND
chr12	84350	gridss39o	G	]chr12:4886681]G	627.96	.	EVENT=gridss39;MATEID=gridss39h;SVTYPE=BND
chr12	4886681	gridss39h	T	T[chr12:84350[	627.96	.	EVENT=gridss39;MATEID=gridss39o;SVTYPE=BND