File: use_debian_packaged_zlib.patch

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r-bioc-variantannotation 1.10.5-1
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Author: Andreas Tille <tille@debian.org>
LastChanged: Mon, 16 Jun 2014 15:39:00 +0200
Description: If the systems includes zlib natively there is no point in
 requiring the import of zlibbioc

--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -11,7 +11,7 @@ License: Artistic-2.0
 Depends: R (>= 2.8.0), methods, BiocGenerics (>= 0.7.7), GenomicRanges
         (>= 1.13.51), Rsamtools (>= 1.15.5)
 Imports: IRanges (>= 1.21.43), XVector, Biostrings (>= 2.31.19),
-        Biobase, AnnotationDbi (>= 1.17.11), zlibbioc, BSgenome,
+        Biobase, AnnotationDbi (>= 1.17.11), BSgenome,
         GenomicFeatures (>= 1.15.15), DBI, utils, rtracklayer
 Suggests: RUnit, BSgenome.Hsapiens.UCSC.hg19,
         TxDb.Hsapiens.UCSC.hg19.knownGene,
--- a/NAMESPACE
+++ b/NAMESPACE
@@ -8,8 +8,6 @@ import(Rsamtools)
 
 import(GenomicRanges)
 
-import(zlibbioc)
-
 importClassesFrom(Biobase, 
     AssayData
 )