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Source: r-bioc-variantannotation
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders: Andreas Tille <tille@debian.org>
Section: gnu-r
Testsuite: autopkgtest-pkg-r
Priority: optional
Build-Depends: debhelper (>= 12~),
dh-r,
r-base-dev,
r-bioc-biocgenerics (>= 0.15.3),
r-bioc-genomeinfodb (>= 1.15.2),
r-bioc-genomicranges (>= 1.31.8),
r-bioc-summarizedexperiment (>= 1.9.9),
r-bioc-rsamtools (>= 1.33.6),
r-cran-dbi,
r-bioc-zlibbioc,
r-bioc-biobase,
r-bioc-s4vectors (>= 0.17.24),
r-bioc-iranges (>= 2.13.13),
r-bioc-xvector (>= 0.19.7),
r-bioc-biostrings (>= 2.47.6),
r-bioc-annotationdbi (>= 1.27.9),
r-bioc-rtracklayer (>= 1.39.7),
r-bioc-bsgenome (>= 1.47.3),
r-bioc-genomicfeatures (>= 1.31.3)
Standards-Version: 4.3.0
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-variantannotation
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-variantannotation.git
Homepage: https://bioconductor.org/packages/VariantAnnotation/
Package: r-bioc-variantannotation
Architecture: any
Depends: ${R:Depends},
${shlibs:Depends},
${misc:Depends}
Recommends: ${R:Recommends}
Suggests: ${R:Suggests}
Description: BioConductor annotation of genetic variants
This BioConductor package provides R functions to annotate variants,
compute amino acid coding changess and to predict coding outcomes.
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