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Source: r-cran-adegenet
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Section: gnu-r
Priority: optional
Build-Depends: debhelper (>= 9),
cdbs,
r-base-dev,
r-cran-ade4,
r-cran-mass,
r-cran-igraph,
r-cran-ape,
r-cran-ggplot2,
r-cran-seqinr,
r-cran-boot,
r-cran-reshape2,
r-cran-vegan,
r-cran-shiny,
r-cran-dplyr,
r-cran-spdep
Standards-Version: 3.9.8
Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-cran-adegenet/trunk/
Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-cran-adegenet/trunk/
Homepage: https://cran.r-project.org/web/packages/adegenet/
Package: r-cran-adegenet
Architecture: any
Depends: ${misc:Depends},
${shlibs:Depends},
${R:Depends},
r-cran-ade4,
r-cran-mass,
r-cran-igraph,
r-cran-ape,
r-cran-ggplot2,
r-cran-seqinr,
r-cran-boot,
r-cran-reshape2,
r-cran-vegan,
r-cran-shiny,
r-cran-dplyr,
r-cran-spdep
Description: GNU R exploratory analysis of genetic and genomic data
Toolset for the exploration of genetic and genomic data. Adegenet
provides formal (S4) classes for storing and handling various genetic
data, including genetic markers with varying ploidy and hierarchical
population structure ('genind' class), alleles counts by populations
('genpop'), and genome-wide SNP data ('genlight'). It also implements
original multivariate methods (DAPC, sPCA), graphics, statistical tests,
simulation tools, distance and similarity measures, and several spatial
methods. A range of both empirical and simulated datasets is also
provided to illustrate various methods.
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