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Source: r-cran-adegenet
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders: Andreas Tille <tille@debian.org>
Section: gnu-r
Testsuite: autopkgtest-pkg-r
Priority: optional
Build-Depends: debhelper-compat (= 12),
dh-r,
r-base-dev,
r-cran-ade4,
r-cran-mass,
r-cran-igraph,
r-cran-ape,
r-cran-shiny,
r-cran-ggplot2,
r-cran-seqinr,
r-cran-spdep,
r-cran-boot,
r-cran-reshape2,
r-cran-dplyr,
r-cran-vegan
Standards-Version: 4.5.0
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-cran-adegenet
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-cran-adegenet.git
Homepage: https://cran.r-project.org/package=adegenet
Rules-Requires-Root: no
Package: r-cran-adegenet
Architecture: any
Depends: ${R:Depends},
${shlibs:Depends},
${misc:Depends}
Recommends: ${R:Recommends}
Suggests: ${R:Suggests}
Description: GNU R exploratory analysis of genetic and genomic data
Toolset for the exploration of genetic and genomic data. Adegenet
provides formal (S4) classes for storing and handling various genetic
data, including genetic markers with varying ploidy and hierarchical
population structure ('genind' class), alleles counts by populations
('genpop'), and genome-wide SNP data ('genlight'). It also implements
original multivariate methods (DAPC, sPCA), graphics, statistical tests,
simulation tools, distance and similarity measures, and several spatial
methods. A range of both empirical and simulated datasets is also
provided to illustrate various methods.
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