1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215
|
e74bdf9c3b2f2ec0a905cb49c73d399d *DESCRIPTION
fff95490a1aaea11cbd3677aa3becb25 *NAMESPACE
ad67bb605cea6b8283634f1241dc02e8 *NEWS.md
73ee8aa6814890a049796a489c7ca342 *R/Algorithm.R
58caa9998340656afaca8ef0596ecae4 *R/ExperimentRegistry.R
37eb8f8adcd0c664233edbab468c70e6 *R/Export.R
c921cd9128dfb1e22a5099a76722e787 *R/Hooks.R
1144a339cb5eb49f9d21f2038a860330 *R/Job.R
9d956435290b06a2e2a4d5d9eb6321b3 *R/JobCollection.R
8ae73adb0f856d49cc715aed97246cfd *R/JobNames.R
a93f90806e25ca5b7059e3ae52a7f43e *R/JobTables.R
782f8a517add43373aa7887139f77b08 *R/Joins.R
22a183e7710d432d2176ac188e6cd2b7 *R/Logs.R
02dd286b258051f4656f75ff04138649 *R/Problem.R
ad6dac8f0e11d25d6570cecb01ed56a7 *R/RDSReader.R
1b74a9ba76b64ce941ce2d4ea62d2401 *R/Registry.R
d805630d4fc456d7b0599c3f39814764 *R/Tags.R
a1cd5efab2ae2c138d6a13876b40cf43 *R/Worker.R
61762989354286fc9ab79bcd602c2625 *R/addExperiments.R
bae5dc249e5583385be9d7a88572ee41 *R/batchMap.R
c27de0e58a5efe2c55b19cc590298142 *R/batchMapResults.R
02a7fe83c74a0aaba3a2c0c5c7835c71 *R/batchReduce.R
9a2272ea98deec0aad60a32fe3e165dd *R/btlapply.R
772cabe30056f6cda450b6c1cfb42084 *R/chunkIds.R
50488faa176371ed2ec350947d5c7572 *R/clearRegistry.R
ffc706907e449dad0a9d9ca7f7a92bac *R/clusterFunctions.R
e728e7ded4bb5da8390fed1d7c354781 *R/clusterFunctionsDocker.R
5b48b0f95ef0032cb4f83c94ee9b4a5c *R/clusterFunctionsInteractive.R
98a78623528a94d5189456ca6e421675 *R/clusterFunctionsLSF.R
f1f5f5ae858df5e8e606f1950f6b1d84 *R/clusterFunctionsMulticore.R
925ab366e52219637af424362db95979 *R/clusterFunctionsOpenLava.R
496641ea7a0fbd85c9f9efedea981400 *R/clusterFunctionsSGE.R
01bced9930a3a5864de11b2991b17571 *R/clusterFunctionsSSH.R
95e5972711141ff3124e6b2b142f57bc *R/clusterFunctionsSlurm.R
a4f5ab48f2f92dc41cb673d29f472955 *R/clusterFunctionsSocket.R
874bfd4c7ab3dd7561f85b73be98b252 *R/clusterFunctionsTORQUE.R
849b049d66d6e529c2c00b3281fff350 *R/config.R
7deec7a01f3aeb978e11f89127045a1a *R/doJobCollection.R
1d7f81aaa08b15d6eabd349edb5ad8ea *R/estimateRuntimes.R
844aa63578332e8b40356d22ef83c317 *R/execJob.R
58df10643a9a87d483d5029556e318da *R/files.R
64ea4d24046549e1111a963a0dea3fc1 *R/findJobs.R
5422e5ea94a864be0bf7a0001ca675de *R/getDefaultRegistry.R
b671529418dde718ba3c338fae2f99d7 *R/getErrorMessages.R
4b1a6fe7ee2fab26e47ee63fdc29ce64 *R/getStatus.R
655e23470d04bd090944374982fc2165 *R/helpers.R
221b8bb1c46cdbe28c6dbec3a61d5d20 *R/ids.R
4c125b9356898a793123b738fb070c19 *R/killJobs.R
3359d5c2d6851c6f73126827289104de *R/loadRegistry.R
51ce9bfd45c5b641f01a6e99b5198436 *R/loadResult.R
545064657b2d3de3ec883462199e74df *R/mergeRegistries.R
89f186c15cffb605afa896cb876ab2f1 *R/reduceResults.R
11d38ad7a3b9e27e5bbb7b2112cb3b3d *R/removeExperiments.R
c5b5e5d23be3b7850519ed5d1fb0a0b2 *R/removeRegistry.R
9c4cd91d3c23ccd6801f2c2e0d039a5c *R/resetJobs.R
4a126ec450a6b88e24056790003b9a2d *R/runOSCommand.R
0f8f45ef73176079386bf2bd56175fec *R/saveRegistry.R
117a9805e885afb3e33278bf35d1f2e9 *R/sleep.R
24c3f122bcbd1c6006dc2e9aa342dda7 *R/submitJobs.R
c2210a00013c784983b630aa44783094 *R/summarizeExperiments.R
271b1afd398826360ab65c6e40cd683c *R/sweepRegistry.R
9f4ef74f03aed751fad6e57e97b50403 *R/syncRegistry.R
cc8d6bb0d06e81d7cdc515cf6ebe6330 *R/testJob.R
1af1e1de8441d732c020b5fe440b3ee0 *R/unwrap.R
8e48227d264b3de2b92f9a0f6985982e *R/updateRegisty.R
ccc39fcc11c06375026710add9cae98e *R/waitForFiles.R
ee8d5a310def6b0a17d091c7ee39b579 *R/waitForJobs.R
ec0dc6faa801e8629b218e62a3c9d6f1 *R/zzz.R
6fcf881b38e7f4458a45764c21bc46a0 *README.md
4b3da1ef074b52b0321e1bf0a3a35cdd *build/vignette.rds
6556eecb24b2aa43db397e06305017ed *inst/CITATION
acb36fe62ca1068e7c348924830ae47d *inst/bin/linux-helper
488a5885a787b089656085cb86160a1f *inst/doc/batchtools.R
e27016a48981bae562a75139b0a7364d *inst/doc/batchtools.Rmd
0c7737c5f92f0a8adad5fc5489173f37 *inst/doc/batchtools.html
08063d98647aaaa1e2cb2f2972e761e2 *inst/templates/lsf-simple.tmpl
d1e95d582ab1b45dc7c01f2ce22d77f2 *inst/templates/openlava-simple.tmpl
aedaa713eacced98333e2cec782b5fc7 *inst/templates/sge-simple.tmpl
ac9b7fd69ef71c1dc04b2ce98217b08d *inst/templates/slurm-dortmund.tmpl
144733207bf996da5e4ed301463dcef3 *inst/templates/slurm-lido3.tmpl
58bf997d8fe9113e0630576fe1460fc6 *inst/templates/slurm-simple.tmpl
00dc8578d50c74b49cf7e10c61f03a65 *inst/templates/testJob.tmpl
c7bf481b0b1e2f393a6c3f1d66317402 *inst/templates/torque-lido.tmpl
26c135db8438c888e8c8f6653e6c23ca *man/JobCollection.Rd
d2d6dd877cc948326d3ac010df468cd7 *man/JobExperiment.Rd
11b32f9bc13343d556d71796bd901eac *man/JobNames.Rd
86f60729acb86742d917cc52c8995744 *man/JoinTables.Rd
e7c41cfc3bbbf478dabc8a0ef6166a85 *man/Tags.Rd
e648b0fd3d9e54e4a3a646c82294920e *man/Worker.Rd
3eeb548162fa201c167a5c568b1f0b63 *man/addAlgorithm.Rd
e042968b28338a05e6be5b5ab6dc87ae *man/addExperiments.Rd
186d620e56b4d1cd3e8fad6ad2d689ce *man/addProblem.Rd
e7b050041fbf4d6e7a1065598672dee1 *man/assertRegistry.Rd
7f8ab8bbf15d9a9ab0ebb0ada102e512 *man/batchExport.Rd
6abb0d4d8416f3d4b1840207c16bb9a5 *man/batchMap.Rd
0b5a6ed8056e78f0fe3b98c82b5a0acd *man/batchMapResults.Rd
417e88a3882000c80199b7ea059d4dab *man/batchReduce.Rd
ec2619f59855e71f5077dbe54deb5a68 *man/batchtools-package.Rd
8d962e883317f5d046e3c2a5f554135b *man/btlapply.Rd
5b04d072f5a95dc9ce7b2142c1ba1975 *man/cfBrewTemplate.Rd
d8d38d2ebfb9aff9f34d5422f88e59f1 *man/cfHandleUnknownSubmitError.Rd
930521ad4669c7ccef7cff1f26a66080 *man/cfKillJob.Rd
623cacf03001939e275722cfef896841 *man/cfReadBrewTemplate.Rd
64114406bdf4e9ee61ec796102b288a8 *man/chunk.Rd
6d7268ee2e16cb1436277603125032fd *man/clearRegistry.Rd
f4a81ca4e12dbc4185734eb868633986 *man/doJobCollection.Rd
b262ef3d5e9330f6dbf4af439f0d5070 *man/estimateRuntimes.Rd
c2761c7410f381cc952c077d2bda1ee3 *man/execJob.Rd
87794aafe59cc99e8efe17214e5b8de5 *man/findConfFile.Rd
93b82b4b70789a9a68e484b62651c725 *man/findJobs.Rd
ba2c29edc24acb90b2f9c73628fab773 *man/findTemplateFile.Rd
2ee444928345c159fbe7bd6a0921bdc3 *man/getDefaultRegistry.Rd
cbac5510b43f5d7ab79899aa0e465760 *man/getErrorMessages.Rd
22f98550c425f772284e181d77a2c5b4 *man/getJobTable.Rd
d694d39176eba0b0c235865d6ffb0c46 *man/getStatus.Rd
215c77e283364cd77b022e262bd56ba5 *man/grepLogs.Rd
0ca6132bfe1d0eab520b74edb51790dc *man/killJobs.Rd
b253327ebfeee3904c3e747135547e3f *man/loadRegistry.Rd
541726d94a83b0bc47b7fa64530e8b05 *man/loadResult.Rd
7691058b6230583fcde0d43e085998ce *man/makeClusterFunctions.Rd
a496b4031343c66f61067ddc87f9bd60 *man/makeClusterFunctionsDocker.Rd
78560539070eefdeee6439e0cdd12a3a *man/makeClusterFunctionsInteractive.Rd
7cc6fbd309040c903a8d123e76429ef3 *man/makeClusterFunctionsLSF.Rd
9677e20ad303d6c0c1c649f959d83e08 *man/makeClusterFunctionsMulticore.Rd
dd19ac0d149f899d6bc3be2ebfe42bc3 *man/makeClusterFunctionsOpenLava.Rd
76e64358ae2b35085a6403de5887579b *man/makeClusterFunctionsSGE.Rd
16da9125c27e58c4570e30e42720e5a8 *man/makeClusterFunctionsSSH.Rd
7d1dd7ce4147abae7b37fcad938ae2b5 *man/makeClusterFunctionsSlurm.Rd
9f8a5afd59befad28b40a83da67cb6df *man/makeClusterFunctionsSocket.Rd
bed6162930f78622d790726dafd985a8 *man/makeClusterFunctionsTORQUE.Rd
98172d4522fdc504321a333873f2e1ea *man/makeExperimentRegistry.Rd
4c09d48798feb37ca2aa8c02b2cf11e3 *man/makeRegistry.Rd
d4598d79306bb1598cbe20e109561be8 *man/makeSubmitJobResult.Rd
1675239684357484112305d37fdc1026 *man/reduceResults.Rd
e0e641bb425fbfbefd226cfa43ebeecb *man/reduceResultsList.Rd
726c758fdaa46b49c08dd9997753b230 *man/removeExperiments.Rd
55bc319ea0d72710e607c2165935842c *man/removeRegistry.Rd
d60618786b86968c550cf7b3e637da94 *man/resetJobs.Rd
2463cfa47db89e0c84f89e183871524b *man/runHook.Rd
a58c0c22cf7efdf262a9f54e3914cedc *man/runOSCommand.Rd
ef5b83a3b228e37a354dae75c49fddcb *man/saveRegistry.Rd
4e30b258f4d67d02318f6f8877ebf4b1 *man/showLog.Rd
996e7e338e3d5b3e30d82b9160d91908 *man/submitJobs.Rd
c63b95b588e92b456c8bfdf46614f65f *man/summarizeExperiments.Rd
70ee70b36705a13165a603d3346671e9 *man/sweepRegistry.Rd
cbe2c2d93057bbfea37c64dfb1a44af7 *man/syncRegistry.Rd
2492bb6fc230f72f9201a4df78205f43 *man/testJob.Rd
d9b815d3b142889bf8c157f2fd06aa4a *man/unwrap.Rd
ac962b5fbbb36a8a97aea4672fcc160b *man/waitForJobs.Rd
26588a23da5a7210df8ceacba40ba4dd *src/Makevars
88417c4efaae231650659d9da71beaa7 *src/binpack.c
3f4cca3378e8eda0f9be19ae6b3b220c *src/count_not_missing.c
dd81e051edf05fa147c51d7a1be399ec *src/fill_gaps.c
de0bd67e7e560ee90200147f6a0830eb *src/init.c
4d8da4ccac75c571f52cd1a09e4f7907 *src/lpt.c
a424a8813407241cfe11b401833363cf *tests/testthat.R
246226aec79992a0e25d6f4385a96db9 *tests/testthat/helper.R
398c796695345a9d7c05b3447e70ac81 *tests/testthat/test_Algorithm.R
544b3009ec51ef2afde05f82f270639a *tests/testthat/test_ClusterFunctions.R
5480014e3e037790dccc303064e03748 *tests/testthat/test_ClusterFunctionsMulticore.R
a1b4b1446a0c64a0c34be625c0e48bac *tests/testthat/test_ClusterFunctionsSSH.R
30409b4c82a76474a1aefc37ffe168dc *tests/testthat/test_ClusterFunctionsSocket.R
b65fa22c3800c0288a086a971ebb676f *tests/testthat/test_ExperimentRegistry.R
a8b6e3d8636a751b413f2147a6647d73 *tests/testthat/test_Job.R
eac8e4ae008ead23eb73f3cea1d6c388 *tests/testthat/test_JobCollection.R
741bbcdf2b7cce49c6ff0add97d036da *tests/testthat/test_JobNames.R
5828122e03ee94a3b22d04d7e49ec15a *tests/testthat/test_Problem.R
b30a67e7a55d8f541fd0316b7d5fd729 *tests/testthat/test_Registry.R
6826ca42404b7b44e3e186e8bdbe7e7e *tests/testthat/test_addExperiments.R
e18400e07ed66ce667048a0d4c2605a2 *tests/testthat/test_batchMap.R
4e126173fbd2818277fc8df622a2d61e *tests/testthat/test_batchReduce.R
7a1ca60b47197de48e817e8a57b98c82 *tests/testthat/test_btlapply.R
f3376f93765e1a82aa8f9a19f7a69c83 *tests/testthat/test_chunk.R
202bb65a8ba4cc4cbfd8b4ab0ddf2d55 *tests/testthat/test_convertIds.R
ff3776c8cd9ccb6d61283bac7a0d20f0 *tests/testthat/test_count.R
9e8ea8ba11031a80936427cbb85b6039 *tests/testthat/test_doJobCollection.R
9a652977c80b787389ec105187579251 *tests/testthat/test_estimateRuntimes.R
2df2fe83f56897fc0186f001b4ba8b95 *tests/testthat/test_export.R
9f905dea0db0c8f8cfc40463a26fb43e *tests/testthat/test_findConfFile.R
3fef81c13011b2727066ce0c6d4aed9b *tests/testthat/test_findJobs.R
3b5790b8cc46d7842b6cff46c697ae29 *tests/testthat/test_foreach.R
7dc7413ae6a3cdbb275e32b82d340023 *tests/testthat/test_future.R
10966447b812b0ab4821041b52d36c2e *tests/testthat/test_getErrorMessages.R
68a05da0b2a1d158027933bd48d3973e *tests/testthat/test_getJobTable.R
c6f4a0c4a1fd819046fe443dc58cf86e *tests/testthat/test_getStatus.R
7f3b38bd924b97b7fc0491e6fe96916b *tests/testthat/test_grepLogs.R
164194d87247771fd86383ebf9e26977 *tests/testthat/test_hooks.R
85f16d721285df26b71cca58c590fa1c *tests/testthat/test_joins.R
d8398084ac9e97121e27a1f334e1cfe5 *tests/testthat/test_killJobs.R
e8a6427e1db3b2ec74231199064c9e5b *tests/testthat/test_manual.R
0044d290ac8daad187fb28805b13fb80 *tests/testthat/test_memory.R
93702f92e38da43d2caf1dbd9dcdc21c *tests/testthat/test_mergeRegistries.R
2edde248207a44cfb2e54aa69e987e72 *tests/testthat/test_parallelMap.R
602cd58060659d7a0da3df226ca3f224 *tests/testthat/test_reduceResults.R
fea83bdd2d2329cc5a60a4af9fd73865 *tests/testthat/test_removeExperiments.R
2a38b28f710bbb1c4df272bb94483469 *tests/testthat/test_removeRegistry.R
af0b3f41dd92b8b5288166a851acec6f *tests/testthat/test_resetJobs.R
8b75aa56bc161a0c904447e90c681d9d *tests/testthat/test_runOSCommand.R
b0e44d3909bc6c7185cbc2246a4ae01d *tests/testthat/test_seed.R
05a2e4b4328604ae7fa6a669740f4518 *tests/testthat/test_showLog.R
cd2ffc179a9fe930a23dac4fe76e3647 *tests/testthat/test_sleep.R
de4b7fdc7e81caeaf5ac7e6741e01bc7 *tests/testthat/test_submitJobs.R
e82a78fd0964b1b717631cd551e55ad4 *tests/testthat/test_summarizeExperiments.R
9795c194ba70a2d0d300959eb56c66cd *tests/testthat/test_sweepRegistry.R
75f997a463843e5160fccf87f6a22a6d *tests/testthat/test_tags.R
063f85613c3fe4b1a3c5f988f5ae1836 *tests/testthat/test_testJob.R
eeb4d822e59e28d6b44f4bc0ed46c09d *tests/testthat/test_unwrap.R
58a56aa57c31d0c3bea1e972561e0956 *tests/testthat/test_waitForJobs.R
e27016a48981bae562a75139b0a7364d *vignettes/batchtools.Rmd
a98f013026e5193936f275ad1ef56aac *vignettes/function_overview.pdf
7bd5346afd47b0dac70556cc79cb2300 *vignettes/function_overview.png
4c66119ba75de50ee6156b11ed2fe954 *vignettes/function_overview.tex
b54e6a305617fde2ce8d37255b33155b *vignettes/tikz_prob_algo_simple.pdf
49b176be252716084fd6107e99768c16 *vignettes/tikz_prob_algo_simple.png
3b50a7f56b4cfd55c619db869420c132 *vignettes/tikz_prob_algo_simple.tex
|