File: MD5

package info (click to toggle)
r-cran-batchtools 0.9.15%2Bdfsg-1
  • links: PTS, VCS
  • area: main
  • in suites: bullseye
  • size: 1,416 kB
  • sloc: ansic: 172; sh: 156; makefile: 2
file content (215 lines) | stat: -rw-r--r-- 12,366 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
e74bdf9c3b2f2ec0a905cb49c73d399d *DESCRIPTION
fff95490a1aaea11cbd3677aa3becb25 *NAMESPACE
ad67bb605cea6b8283634f1241dc02e8 *NEWS.md
73ee8aa6814890a049796a489c7ca342 *R/Algorithm.R
58caa9998340656afaca8ef0596ecae4 *R/ExperimentRegistry.R
37eb8f8adcd0c664233edbab468c70e6 *R/Export.R
c921cd9128dfb1e22a5099a76722e787 *R/Hooks.R
1144a339cb5eb49f9d21f2038a860330 *R/Job.R
9d956435290b06a2e2a4d5d9eb6321b3 *R/JobCollection.R
8ae73adb0f856d49cc715aed97246cfd *R/JobNames.R
a93f90806e25ca5b7059e3ae52a7f43e *R/JobTables.R
782f8a517add43373aa7887139f77b08 *R/Joins.R
22a183e7710d432d2176ac188e6cd2b7 *R/Logs.R
02dd286b258051f4656f75ff04138649 *R/Problem.R
ad6dac8f0e11d25d6570cecb01ed56a7 *R/RDSReader.R
1b74a9ba76b64ce941ce2d4ea62d2401 *R/Registry.R
d805630d4fc456d7b0599c3f39814764 *R/Tags.R
a1cd5efab2ae2c138d6a13876b40cf43 *R/Worker.R
61762989354286fc9ab79bcd602c2625 *R/addExperiments.R
bae5dc249e5583385be9d7a88572ee41 *R/batchMap.R
c27de0e58a5efe2c55b19cc590298142 *R/batchMapResults.R
02a7fe83c74a0aaba3a2c0c5c7835c71 *R/batchReduce.R
9a2272ea98deec0aad60a32fe3e165dd *R/btlapply.R
772cabe30056f6cda450b6c1cfb42084 *R/chunkIds.R
50488faa176371ed2ec350947d5c7572 *R/clearRegistry.R
ffc706907e449dad0a9d9ca7f7a92bac *R/clusterFunctions.R
e728e7ded4bb5da8390fed1d7c354781 *R/clusterFunctionsDocker.R
5b48b0f95ef0032cb4f83c94ee9b4a5c *R/clusterFunctionsInteractive.R
98a78623528a94d5189456ca6e421675 *R/clusterFunctionsLSF.R
f1f5f5ae858df5e8e606f1950f6b1d84 *R/clusterFunctionsMulticore.R
925ab366e52219637af424362db95979 *R/clusterFunctionsOpenLava.R
496641ea7a0fbd85c9f9efedea981400 *R/clusterFunctionsSGE.R
01bced9930a3a5864de11b2991b17571 *R/clusterFunctionsSSH.R
95e5972711141ff3124e6b2b142f57bc *R/clusterFunctionsSlurm.R
a4f5ab48f2f92dc41cb673d29f472955 *R/clusterFunctionsSocket.R
874bfd4c7ab3dd7561f85b73be98b252 *R/clusterFunctionsTORQUE.R
849b049d66d6e529c2c00b3281fff350 *R/config.R
7deec7a01f3aeb978e11f89127045a1a *R/doJobCollection.R
1d7f81aaa08b15d6eabd349edb5ad8ea *R/estimateRuntimes.R
844aa63578332e8b40356d22ef83c317 *R/execJob.R
58df10643a9a87d483d5029556e318da *R/files.R
64ea4d24046549e1111a963a0dea3fc1 *R/findJobs.R
5422e5ea94a864be0bf7a0001ca675de *R/getDefaultRegistry.R
b671529418dde718ba3c338fae2f99d7 *R/getErrorMessages.R
4b1a6fe7ee2fab26e47ee63fdc29ce64 *R/getStatus.R
655e23470d04bd090944374982fc2165 *R/helpers.R
221b8bb1c46cdbe28c6dbec3a61d5d20 *R/ids.R
4c125b9356898a793123b738fb070c19 *R/killJobs.R
3359d5c2d6851c6f73126827289104de *R/loadRegistry.R
51ce9bfd45c5b641f01a6e99b5198436 *R/loadResult.R
545064657b2d3de3ec883462199e74df *R/mergeRegistries.R
89f186c15cffb605afa896cb876ab2f1 *R/reduceResults.R
11d38ad7a3b9e27e5bbb7b2112cb3b3d *R/removeExperiments.R
c5b5e5d23be3b7850519ed5d1fb0a0b2 *R/removeRegistry.R
9c4cd91d3c23ccd6801f2c2e0d039a5c *R/resetJobs.R
4a126ec450a6b88e24056790003b9a2d *R/runOSCommand.R
0f8f45ef73176079386bf2bd56175fec *R/saveRegistry.R
117a9805e885afb3e33278bf35d1f2e9 *R/sleep.R
24c3f122bcbd1c6006dc2e9aa342dda7 *R/submitJobs.R
c2210a00013c784983b630aa44783094 *R/summarizeExperiments.R
271b1afd398826360ab65c6e40cd683c *R/sweepRegistry.R
9f4ef74f03aed751fad6e57e97b50403 *R/syncRegistry.R
cc8d6bb0d06e81d7cdc515cf6ebe6330 *R/testJob.R
1af1e1de8441d732c020b5fe440b3ee0 *R/unwrap.R
8e48227d264b3de2b92f9a0f6985982e *R/updateRegisty.R
ccc39fcc11c06375026710add9cae98e *R/waitForFiles.R
ee8d5a310def6b0a17d091c7ee39b579 *R/waitForJobs.R
ec0dc6faa801e8629b218e62a3c9d6f1 *R/zzz.R
6fcf881b38e7f4458a45764c21bc46a0 *README.md
4b3da1ef074b52b0321e1bf0a3a35cdd *build/vignette.rds
6556eecb24b2aa43db397e06305017ed *inst/CITATION
acb36fe62ca1068e7c348924830ae47d *inst/bin/linux-helper
488a5885a787b089656085cb86160a1f *inst/doc/batchtools.R
e27016a48981bae562a75139b0a7364d *inst/doc/batchtools.Rmd
0c7737c5f92f0a8adad5fc5489173f37 *inst/doc/batchtools.html
08063d98647aaaa1e2cb2f2972e761e2 *inst/templates/lsf-simple.tmpl
d1e95d582ab1b45dc7c01f2ce22d77f2 *inst/templates/openlava-simple.tmpl
aedaa713eacced98333e2cec782b5fc7 *inst/templates/sge-simple.tmpl
ac9b7fd69ef71c1dc04b2ce98217b08d *inst/templates/slurm-dortmund.tmpl
144733207bf996da5e4ed301463dcef3 *inst/templates/slurm-lido3.tmpl
58bf997d8fe9113e0630576fe1460fc6 *inst/templates/slurm-simple.tmpl
00dc8578d50c74b49cf7e10c61f03a65 *inst/templates/testJob.tmpl
c7bf481b0b1e2f393a6c3f1d66317402 *inst/templates/torque-lido.tmpl
26c135db8438c888e8c8f6653e6c23ca *man/JobCollection.Rd
d2d6dd877cc948326d3ac010df468cd7 *man/JobExperiment.Rd
11b32f9bc13343d556d71796bd901eac *man/JobNames.Rd
86f60729acb86742d917cc52c8995744 *man/JoinTables.Rd
e7c41cfc3bbbf478dabc8a0ef6166a85 *man/Tags.Rd
e648b0fd3d9e54e4a3a646c82294920e *man/Worker.Rd
3eeb548162fa201c167a5c568b1f0b63 *man/addAlgorithm.Rd
e042968b28338a05e6be5b5ab6dc87ae *man/addExperiments.Rd
186d620e56b4d1cd3e8fad6ad2d689ce *man/addProblem.Rd
e7b050041fbf4d6e7a1065598672dee1 *man/assertRegistry.Rd
7f8ab8bbf15d9a9ab0ebb0ada102e512 *man/batchExport.Rd
6abb0d4d8416f3d4b1840207c16bb9a5 *man/batchMap.Rd
0b5a6ed8056e78f0fe3b98c82b5a0acd *man/batchMapResults.Rd
417e88a3882000c80199b7ea059d4dab *man/batchReduce.Rd
ec2619f59855e71f5077dbe54deb5a68 *man/batchtools-package.Rd
8d962e883317f5d046e3c2a5f554135b *man/btlapply.Rd
5b04d072f5a95dc9ce7b2142c1ba1975 *man/cfBrewTemplate.Rd
d8d38d2ebfb9aff9f34d5422f88e59f1 *man/cfHandleUnknownSubmitError.Rd
930521ad4669c7ccef7cff1f26a66080 *man/cfKillJob.Rd
623cacf03001939e275722cfef896841 *man/cfReadBrewTemplate.Rd
64114406bdf4e9ee61ec796102b288a8 *man/chunk.Rd
6d7268ee2e16cb1436277603125032fd *man/clearRegistry.Rd
f4a81ca4e12dbc4185734eb868633986 *man/doJobCollection.Rd
b262ef3d5e9330f6dbf4af439f0d5070 *man/estimateRuntimes.Rd
c2761c7410f381cc952c077d2bda1ee3 *man/execJob.Rd
87794aafe59cc99e8efe17214e5b8de5 *man/findConfFile.Rd
93b82b4b70789a9a68e484b62651c725 *man/findJobs.Rd
ba2c29edc24acb90b2f9c73628fab773 *man/findTemplateFile.Rd
2ee444928345c159fbe7bd6a0921bdc3 *man/getDefaultRegistry.Rd
cbac5510b43f5d7ab79899aa0e465760 *man/getErrorMessages.Rd
22f98550c425f772284e181d77a2c5b4 *man/getJobTable.Rd
d694d39176eba0b0c235865d6ffb0c46 *man/getStatus.Rd
215c77e283364cd77b022e262bd56ba5 *man/grepLogs.Rd
0ca6132bfe1d0eab520b74edb51790dc *man/killJobs.Rd
b253327ebfeee3904c3e747135547e3f *man/loadRegistry.Rd
541726d94a83b0bc47b7fa64530e8b05 *man/loadResult.Rd
7691058b6230583fcde0d43e085998ce *man/makeClusterFunctions.Rd
a496b4031343c66f61067ddc87f9bd60 *man/makeClusterFunctionsDocker.Rd
78560539070eefdeee6439e0cdd12a3a *man/makeClusterFunctionsInteractive.Rd
7cc6fbd309040c903a8d123e76429ef3 *man/makeClusterFunctionsLSF.Rd
9677e20ad303d6c0c1c649f959d83e08 *man/makeClusterFunctionsMulticore.Rd
dd19ac0d149f899d6bc3be2ebfe42bc3 *man/makeClusterFunctionsOpenLava.Rd
76e64358ae2b35085a6403de5887579b *man/makeClusterFunctionsSGE.Rd
16da9125c27e58c4570e30e42720e5a8 *man/makeClusterFunctionsSSH.Rd
7d1dd7ce4147abae7b37fcad938ae2b5 *man/makeClusterFunctionsSlurm.Rd
9f8a5afd59befad28b40a83da67cb6df *man/makeClusterFunctionsSocket.Rd
bed6162930f78622d790726dafd985a8 *man/makeClusterFunctionsTORQUE.Rd
98172d4522fdc504321a333873f2e1ea *man/makeExperimentRegistry.Rd
4c09d48798feb37ca2aa8c02b2cf11e3 *man/makeRegistry.Rd
d4598d79306bb1598cbe20e109561be8 *man/makeSubmitJobResult.Rd
1675239684357484112305d37fdc1026 *man/reduceResults.Rd
e0e641bb425fbfbefd226cfa43ebeecb *man/reduceResultsList.Rd
726c758fdaa46b49c08dd9997753b230 *man/removeExperiments.Rd
55bc319ea0d72710e607c2165935842c *man/removeRegistry.Rd
d60618786b86968c550cf7b3e637da94 *man/resetJobs.Rd
2463cfa47db89e0c84f89e183871524b *man/runHook.Rd
a58c0c22cf7efdf262a9f54e3914cedc *man/runOSCommand.Rd
ef5b83a3b228e37a354dae75c49fddcb *man/saveRegistry.Rd
4e30b258f4d67d02318f6f8877ebf4b1 *man/showLog.Rd
996e7e338e3d5b3e30d82b9160d91908 *man/submitJobs.Rd
c63b95b588e92b456c8bfdf46614f65f *man/summarizeExperiments.Rd
70ee70b36705a13165a603d3346671e9 *man/sweepRegistry.Rd
cbe2c2d93057bbfea37c64dfb1a44af7 *man/syncRegistry.Rd
2492bb6fc230f72f9201a4df78205f43 *man/testJob.Rd
d9b815d3b142889bf8c157f2fd06aa4a *man/unwrap.Rd
ac962b5fbbb36a8a97aea4672fcc160b *man/waitForJobs.Rd
26588a23da5a7210df8ceacba40ba4dd *src/Makevars
88417c4efaae231650659d9da71beaa7 *src/binpack.c
3f4cca3378e8eda0f9be19ae6b3b220c *src/count_not_missing.c
dd81e051edf05fa147c51d7a1be399ec *src/fill_gaps.c
de0bd67e7e560ee90200147f6a0830eb *src/init.c
4d8da4ccac75c571f52cd1a09e4f7907 *src/lpt.c
a424a8813407241cfe11b401833363cf *tests/testthat.R
246226aec79992a0e25d6f4385a96db9 *tests/testthat/helper.R
398c796695345a9d7c05b3447e70ac81 *tests/testthat/test_Algorithm.R
544b3009ec51ef2afde05f82f270639a *tests/testthat/test_ClusterFunctions.R
5480014e3e037790dccc303064e03748 *tests/testthat/test_ClusterFunctionsMulticore.R
a1b4b1446a0c64a0c34be625c0e48bac *tests/testthat/test_ClusterFunctionsSSH.R
30409b4c82a76474a1aefc37ffe168dc *tests/testthat/test_ClusterFunctionsSocket.R
b65fa22c3800c0288a086a971ebb676f *tests/testthat/test_ExperimentRegistry.R
a8b6e3d8636a751b413f2147a6647d73 *tests/testthat/test_Job.R
eac8e4ae008ead23eb73f3cea1d6c388 *tests/testthat/test_JobCollection.R
741bbcdf2b7cce49c6ff0add97d036da *tests/testthat/test_JobNames.R
5828122e03ee94a3b22d04d7e49ec15a *tests/testthat/test_Problem.R
b30a67e7a55d8f541fd0316b7d5fd729 *tests/testthat/test_Registry.R
6826ca42404b7b44e3e186e8bdbe7e7e *tests/testthat/test_addExperiments.R
e18400e07ed66ce667048a0d4c2605a2 *tests/testthat/test_batchMap.R
4e126173fbd2818277fc8df622a2d61e *tests/testthat/test_batchReduce.R
7a1ca60b47197de48e817e8a57b98c82 *tests/testthat/test_btlapply.R
f3376f93765e1a82aa8f9a19f7a69c83 *tests/testthat/test_chunk.R
202bb65a8ba4cc4cbfd8b4ab0ddf2d55 *tests/testthat/test_convertIds.R
ff3776c8cd9ccb6d61283bac7a0d20f0 *tests/testthat/test_count.R
9e8ea8ba11031a80936427cbb85b6039 *tests/testthat/test_doJobCollection.R
9a652977c80b787389ec105187579251 *tests/testthat/test_estimateRuntimes.R
2df2fe83f56897fc0186f001b4ba8b95 *tests/testthat/test_export.R
9f905dea0db0c8f8cfc40463a26fb43e *tests/testthat/test_findConfFile.R
3fef81c13011b2727066ce0c6d4aed9b *tests/testthat/test_findJobs.R
3b5790b8cc46d7842b6cff46c697ae29 *tests/testthat/test_foreach.R
7dc7413ae6a3cdbb275e32b82d340023 *tests/testthat/test_future.R
10966447b812b0ab4821041b52d36c2e *tests/testthat/test_getErrorMessages.R
68a05da0b2a1d158027933bd48d3973e *tests/testthat/test_getJobTable.R
c6f4a0c4a1fd819046fe443dc58cf86e *tests/testthat/test_getStatus.R
7f3b38bd924b97b7fc0491e6fe96916b *tests/testthat/test_grepLogs.R
164194d87247771fd86383ebf9e26977 *tests/testthat/test_hooks.R
85f16d721285df26b71cca58c590fa1c *tests/testthat/test_joins.R
d8398084ac9e97121e27a1f334e1cfe5 *tests/testthat/test_killJobs.R
e8a6427e1db3b2ec74231199064c9e5b *tests/testthat/test_manual.R
0044d290ac8daad187fb28805b13fb80 *tests/testthat/test_memory.R
93702f92e38da43d2caf1dbd9dcdc21c *tests/testthat/test_mergeRegistries.R
2edde248207a44cfb2e54aa69e987e72 *tests/testthat/test_parallelMap.R
602cd58060659d7a0da3df226ca3f224 *tests/testthat/test_reduceResults.R
fea83bdd2d2329cc5a60a4af9fd73865 *tests/testthat/test_removeExperiments.R
2a38b28f710bbb1c4df272bb94483469 *tests/testthat/test_removeRegistry.R
af0b3f41dd92b8b5288166a851acec6f *tests/testthat/test_resetJobs.R
8b75aa56bc161a0c904447e90c681d9d *tests/testthat/test_runOSCommand.R
b0e44d3909bc6c7185cbc2246a4ae01d *tests/testthat/test_seed.R
05a2e4b4328604ae7fa6a669740f4518 *tests/testthat/test_showLog.R
cd2ffc179a9fe930a23dac4fe76e3647 *tests/testthat/test_sleep.R
de4b7fdc7e81caeaf5ac7e6741e01bc7 *tests/testthat/test_submitJobs.R
e82a78fd0964b1b717631cd551e55ad4 *tests/testthat/test_summarizeExperiments.R
9795c194ba70a2d0d300959eb56c66cd *tests/testthat/test_sweepRegistry.R
75f997a463843e5160fccf87f6a22a6d *tests/testthat/test_tags.R
063f85613c3fe4b1a3c5f988f5ae1836 *tests/testthat/test_testJob.R
eeb4d822e59e28d6b44f4bc0ed46c09d *tests/testthat/test_unwrap.R
58a56aa57c31d0c3bea1e972561e0956 *tests/testthat/test_waitForJobs.R
e27016a48981bae562a75139b0a7364d *vignettes/batchtools.Rmd
a98f013026e5193936f275ad1ef56aac *vignettes/function_overview.pdf
7bd5346afd47b0dac70556cc79cb2300 *vignettes/function_overview.png
4c66119ba75de50ee6156b11ed2fe954 *vignettes/function_overview.tex
b54e6a305617fde2ce8d37255b33155b *vignettes/tikz_prob_algo_simple.pdf
49b176be252716084fd6107e99768c16 *vignettes/tikz_prob_algo_simple.png
3b50a7f56b4cfd55c619db869420c132 *vignettes/tikz_prob_algo_simple.tex