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#' Error bars.
#'
#' @section Aesthetics:
#' \Sexpr[results=rd,stage=build]{ggplot2:::rd_aesthetics("geom", "errorbar")}
#'
#' @seealso \code{\link{geom_pointrange}}: range indicated by straight line,
#' with point in the middle; \code{\link{geom_linerange}}: range indicated
#' by straight line; \code{\link{geom_crossbar}}: hollow bar with middle
#' indicated by horizontal line; \code{\link{stat_summary}}: examples of
#' these guys in use, \code{\link{geom_smooth}} for continuous analog
#' @inheritParams geom_point
#' @export
#' @examples
#' # Create a simple example dataset
#' df <- data.frame(
#' trt = factor(c(1, 1, 2, 2)),
#' resp = c(1, 5, 3, 4),
#' group = factor(c(1, 2, 1, 2)),
#' se = c(0.1, 0.3, 0.3, 0.2)
#' )
#' df2 <- df[c(1,3),]
#'
#' # Define the top and bottom of the errorbars
#' limits <- aes(ymax = resp + se, ymin=resp - se)
#'
#' p <- ggplot(df, aes(fill=group, y=resp, x=trt))
#' p + geom_bar(position="dodge", stat="identity")
#'
#' # Because the bars and errorbars have different widths
#' # we need to specify how wide the objects we are dodging are
#' dodge <- position_dodge(width=0.9)
#' p + geom_bar(position=dodge) + geom_errorbar(limits, position=dodge, width=0.25)
#'
#' p <- ggplot(df2, aes(fill=group, y=resp, x=trt))
#' p + geom_bar(position=dodge)
#' p + geom_bar(position=dodge) + geom_errorbar(limits, position=dodge, width=0.25)
#'
#' p <- ggplot(df, aes(colour=group, y=resp, x=trt))
#' p + geom_point() + geom_errorbar(limits, width=0.2)
#' p + geom_pointrange(limits)
#' p + geom_crossbar(limits, width=0.2)
#'
#' # If we want to draw lines, we need to manually set the
#' # groups which define the lines - here the groups in the
#' # original dataframe
#' p + geom_line(aes(group=group)) + geom_errorbar(limits, width=0.2)
geom_errorbar <- function (mapping = NULL, data = NULL, stat = "identity", position = "identity", ...) {
GeomErrorbar$new(mapping = mapping, data = data, stat = stat, position = position, ...)
}
GeomErrorbar <- proto(Geom, {
objname <- "errorbar"
default_stat <- function(.) StatIdentity
default_aes <- function(.) aes(colour = "black", size=0.5, linetype=1, width=0.5, alpha = NA)
guide_geom <- function(.) "path"
required_aes <- c("x", "ymin", "ymax")
reparameterise <- function(., df, params) {
df$width <- df$width %||%
params$width %||% (resolution(df$x, FALSE) * 0.9)
transform(df,
xmin = x - width / 2, xmax = x + width / 2, width = NULL
)
}
draw <- function(., data, scales, coordinates, width = NULL, ...) {
GeomPath$draw(with(data, data.frame(
x = as.vector(rbind(xmin, xmax, NA, x, x, NA, xmin, xmax)),
y = as.vector(rbind(ymax, ymax, NA, ymax, ymin, NA, ymin, ymin)),
colour = rep(colour, each = 8),
alpha = rep(alpha, each = 8),
size = rep(size, each = 8),
linetype = rep(linetype, each = 8),
group = rep(1:(nrow(data)), each = 8),
stringsAsFactors = FALSE,
row.names = 1:(nrow(data) * 8)
)), scales, coordinates, ...)
}
})
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