#' Stack overlapping objects on top of each another
#'
#' `position_stack()` stacks bars on top of each other;
#' `position_fill()` stacks bars and standardises each stack to have
#' constant height.
#'
#' `position_fill()` and `position_stack()` automatically stack
#' values in reverse order of the group aesthetic, which for bar charts is
#' usually defined by the fill aesthetic (the default group aesthetic is formed
#' by the combination of all discrete aesthetics except for x and y). This
#' default ensures that bar colours align with the default legend.
#'
#' There are three ways to override the defaults depending on what you want:
#'
#' \enumerate{
#'   \item Change the order of the levels in the underlying factor. This
#'     will change the stacking order, and the order of keys in the legend.
#'
#'   \item Set the legend `breaks` to change the order of the keys
#'     without affecting the stacking.
#'
#'   \item Manually set the group aesthetic to change the stacking order
#'     without affecting the legend.
#' }
#'
#' Stacking of positive and negative values are performed separately so that
#' positive values stack upwards from the x-axis and negative values stack
#' downward.
#'
#' Because stacking is performed after scale transformations, stacking with
#' non-linear scales gives distortions that easily lead to misinterpretations of
#' the data. It is therefore *discouraged* to use these position adjustments in
#' combination with scale transformations, such as logarithmic or square root
#' scales.
#'
#' @family position adjustments
#' @param vjust Vertical adjustment for geoms that have a position
#'   (like points or lines), not a dimension (like bars or areas). Set to
#'   `0` to align with the bottom, `0.5` for the middle,
#'   and `1` (the default) for the top.
#' @param reverse If `TRUE`, will reverse the default stacking order.
#'   This is useful if you're rotating both the plot and legend.
#' @seealso See [geom_bar()] and [geom_area()] for
#'   more examples.
#' @export
#' @examples
#' # Stacking and filling ------------------------------------------------------
#'
#' # Stacking is the default behaviour for most area plots.
#' # Fill makes it easier to compare proportions
#' ggplot(mtcars, aes(factor(cyl), fill = factor(vs))) +
#'   geom_bar()
#' ggplot(mtcars, aes(factor(cyl), fill = factor(vs))) +
#'   geom_bar(position = "fill")
#'
#' ggplot(diamonds, aes(price, fill = cut)) +
#'   geom_histogram(binwidth = 500)
#' ggplot(diamonds, aes(price, fill = cut)) +
#'   geom_histogram(binwidth = 500, position = "fill")
#'
#' # Stacking is also useful for time series
#' set.seed(1)
#' series <- data.frame(
#'   time = c(rep(1, 4),rep(2, 4), rep(3, 4), rep(4, 4)),
#'   type = rep(c('a', 'b', 'c', 'd'), 4),
#'   value = rpois(16, 10)
#' )
#' ggplot(series, aes(time, value)) +
#'   geom_area(aes(fill = type))
#'
#' # Stacking order ------------------------------------------------------------
#' # The stacking order is carefully designed so that the plot matches
#' # the legend.
#'
#' # You control the stacking order by setting the levels of the underlying
#' # factor. See the forcats package for convenient helpers.
#' series$type2 <- factor(series$type, levels = c('c', 'b', 'd', 'a'))
#' ggplot(series, aes(time, value)) +
#'   geom_area(aes(fill = type2))
#'
#' # You can change the order of the levels in the legend using the scale
#' ggplot(series, aes(time, value)) +
#'   geom_area(aes(fill = type)) +
#'   scale_fill_discrete(breaks = c('a', 'b', 'c', 'd'))
#'
#' # If you've flipped the plot, use reverse = TRUE so the levels
#' # continue to match
#' ggplot(series, aes(time, value)) +
#'   geom_area(aes(fill = type2), position = position_stack(reverse = TRUE)) +
#'   coord_flip() +
#'   theme(legend.position = "top")
#'
#' # Non-area plots ------------------------------------------------------------
#'
#' # When stacking across multiple layers it's a good idea to always set
#' # the `group` aesthetic in the ggplot() call. This ensures that all layers
#' # are stacked in the same way.
#' ggplot(series, aes(time, value, group = type)) +
#'   geom_line(aes(colour = type), position = "stack") +
#'   geom_point(aes(colour = type), position = "stack")
#'
#' ggplot(series, aes(time, value, group = type)) +
#'   geom_area(aes(fill = type)) +
#'   geom_line(aes(group = type), position = "stack")
#'
#' # You can also stack labels, but the default position is suboptimal.
#' ggplot(series, aes(time, value, group = type)) +
#'   geom_area(aes(fill = type)) +
#'   geom_text(aes(label = type), position = "stack")
#'
#' # You can override this with the vjust parameter. A vjust of 0.5
#' # will center the labels inside the corresponding area
#' ggplot(series, aes(time, value, group = type)) +
#'   geom_area(aes(fill = type)) +
#'   geom_text(aes(label = type), position = position_stack(vjust = 0.5))
#'
#' # Negative values -----------------------------------------------------------
#'
#' df <- tibble::tribble(
#'   ~x, ~y, ~grp,
#'   "a", 1,  "x",
#'   "a", 2,  "y",
#'   "b", 1,  "x",
#'   "b", 3,  "y",
#'   "b", -1, "y"
#' )
#' ggplot(data = df, aes(x, y, group = grp)) +
#'   geom_col(aes(fill = grp), position = position_stack(reverse = TRUE)) +
#'   geom_hline(yintercept = 0)
#'
#' ggplot(data = df, aes(x, y, group = grp)) +
#'   geom_col(aes(fill = grp)) +
#'   geom_hline(yintercept = 0) +
#'   geom_text(aes(label = grp), position = position_stack(vjust = 0.5))
position_stack <- function(vjust = 1, reverse = FALSE) {
  ggproto(NULL, PositionStack, vjust = vjust, reverse = reverse)
}

#' @export
#' @rdname position_stack
position_fill <- function(vjust = 1, reverse = FALSE) {
  ggproto(NULL, PositionFill, vjust = vjust, reverse = reverse)
}

#' @rdname ggplot2-ggproto
#' @format NULL
#' @usage NULL
#' @export
PositionStack <- ggproto("PositionStack", Position,
  type = NULL,
  vjust = 1,
  fill = FALSE,
  reverse = FALSE,

  setup_params = function(self, data) {
    flipped_aes <- has_flipped_aes(data)
    data <- flip_data(data, flipped_aes)
    list(
      var = self$var %||% stack_var(data),
      fill = self$fill,
      vjust = self$vjust,
      reverse = self$reverse,
      flipped_aes = flipped_aes
    )
  },

  setup_data = function(self, data, params) {
    data <- flip_data(data, params$flipped_aes)
    if (is.null(params$var)) {
      return(data)
    }

    data$ymax <- switch(params$var,
      y = data$y,
      ymax = as.numeric(ifelse(data$ymax == 0, data$ymin, data$ymax))
    )

    data <- remove_missing(
      data,
      vars = c("x", "xmin", "xmax", "y"),
      name = "position_stack"
    )
    flip_data(data, params$flipped_aes)
  },

  compute_panel = function(data, params, scales) {
    data <- flip_data(data, params$flipped_aes)
    if (is.null(params$var)) {
      return(data)
    }

    negative <- data$ymax < 0
    negative[is.na(negative)] <- FALSE

    neg <- data[negative, , drop = FALSE]
    pos <- data[!negative, , drop = FALSE]

    if (any(negative)) {
      neg <- collide(neg, NULL, "position_stack", pos_stack,
        vjust = params$vjust,
        fill = params$fill,
        reverse = params$reverse
      )
    }
    if (any(!negative)) {
      pos <- collide(pos, NULL, "position_stack", pos_stack,
        vjust = params$vjust,
        fill = params$fill,
        reverse = params$reverse
      )
    }

    data <- vec_rbind0(neg, pos)[match(seq_len(nrow(data)), c(which(negative), which(!negative))),]
    flip_data(data, params$flipped_aes)
  }
)

pos_stack <- function(df, width, vjust = 1, fill = FALSE) {
  n <- nrow(df) + 1
  y <- ifelse(is.na(df$y), 0, df$y)
  heights <- c(0, cumsum(y))

  if (fill) {
    heights <- heights / abs(heights[length(heights)])
  }
# We need to preserve ymin/ymax order. If ymax is lower than ymin in input, it should remain that way
  if (!is.null(df$ymin) && !is.null(df$ymax)) {
    max_is_lower <- df$ymax < df$ymin
  } else {
    max_is_lower <- rep(FALSE, nrow(df))
  }
  ymin <- pmin(heights[-n], heights[-1])
  ymax <- pmax(heights[-n], heights[-1])
  df$y <- (1 - vjust) * ymin + vjust * ymax
  df$ymin <- as.numeric(ifelse(max_is_lower, ymax, ymin))
  df$ymax <- as.numeric(ifelse(max_is_lower, ymin, ymax))
  df
}


#' @rdname ggplot2-ggproto
#' @format NULL
#' @usage NULL
#' @export
PositionFill <- ggproto("PositionFill", PositionStack,
  fill = TRUE
)

stack_var <- function(data) {
  if (!is.null(data$ymax)) {
    if (any(data$ymin != 0 & data$ymax != 0, na.rm = TRUE)) {
      cli::cli_warn("Stacking not well defined when not anchored on the axis")
    }
    "ymax"
  } else if (!is.null(data$y)) {
    "y"
  } else {
    cli::cli_warn(c(
      "Stacking requires either the {.field ymin} {.emph and} {.field ymin} or the {.field y} aesthetics",
      "i" = "Maybe you want {.code position = \"identity\"}?"
    ))
    NULL
  }
}