File: scale-gradient.R

package info (click to toggle)
r-cran-ggplot2 4.0.2%2Bdfsg-1
  • links: PTS, VCS
  • area: main
  • in suites: sid
  • size: 11,084 kB
  • sloc: sh: 15; makefile: 5
file content (188 lines) | stat: -rw-r--r-- 7,029 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
#' Gradient colour scales
#'
#' `scale_*_gradient` creates a two colour gradient (low-high),
#' `scale_*_gradient2` creates a diverging colour gradient (low-mid-high),
#' `scale_*_gradientn` creates a n-colour gradient. For binned variants of
#' these scales, see the [color steps][scale_colour_steps] scales.
#'
#' Default colours are generated with \pkg{munsell} and
#' `mnsl(c("2.5PB 2/4", "2.5PB 7/10"))`. Generally, for continuous
#' colour scales you want to keep hue constant, but vary chroma and
#' luminance. The \pkg{munsell} package makes this easy to do using the
#' Munsell colour system.
#'
#' @inheritParams scales::pal_seq_gradient
#' @inheritParams scale_colour_hue
#' @param low,high Colours for low and high ends of the gradient.
#' @param guide Type of legend. Use `"colourbar"` for continuous
#'   colour bar, or `"legend"` for discrete colour legend.
#' @inheritDotParams continuous_scale -na.value -guide -aesthetics -expand -position -palette -fallback.palette
#' @seealso [scales::pal_seq_gradient()] for details on underlying
#'   palette, [scale_colour_steps()] for binned variants of these scales.
#'
#'   The documentation on [colour aesthetics][aes_colour_fill_alpha].
#' @family colour scales
#' @rdname scale_gradient
#' @export
#' @examples
#' set.seed(1)
#' df <- data.frame(
#'   x = runif(100),
#'   y = runif(100),
#'   z1 = rnorm(100),
#'   z2 = abs(rnorm(100))
#' )
#'
#' df_na <- data.frame(
#'   value = seq(1, 20),
#'   x = runif(20),
#'   y = runif(20),
#'   z1 = c(rep(NA, 10), rnorm(10))
#' )
#'
#' # Default colour scale colours from light blue to dark blue
#' ggplot(df, aes(x, y)) +
#'   geom_point(aes(colour = z2))
#'
#' # For diverging colour scales use gradient2
#' ggplot(df, aes(x, y)) +
#'   geom_point(aes(colour = z1)) +
#'   scale_colour_gradient2()
#'
#' # Use your own colour scale with gradientn
#' ggplot(df, aes(x, y)) +
#'   geom_point(aes(colour = z1)) +
#'   scale_colour_gradientn(colours = terrain.colors(10))
#'
#' # The gradientn scale can be centered by using a rescaler
#' ggplot(df, aes(x, y)) +
#'   geom_point(aes(colour = z1)) +
#'   scale_colour_gradientn(
#'     colours = c("blue", "dodgerblue", "white", "orange", "red"),
#'     rescaler = ~ scales::rescale_mid(.x, mid = 0)
#'   )
#'
#' # Equivalent fill scales do the same job for the fill aesthetic
#' ggplot(faithfuld, aes(waiting, eruptions)) +
#'   geom_raster(aes(fill = density)) +
#'   scale_fill_gradientn(colours = terrain.colors(10))
#'
#' # Adjust colour choices with low and high
#' ggplot(df, aes(x, y)) +
#'   geom_point(aes(colour = z2)) +
#'   scale_colour_gradient(low = "white", high = "black")
#' # Avoid red-green colour contrasts because ~10% of men have difficulty
#' # seeing them
#'
#'# Use `na.value = NA` to hide missing values but keep the original axis range
#' ggplot(df_na, aes(x = value, y)) +
#'   geom_bar(aes(fill = z1), stat = "identity") +
#'   scale_fill_gradient(low = "yellow", high = "red", na.value = NA)
#'
#'  ggplot(df_na, aes(x, y)) +
#'    geom_point(aes(colour = z1)) +
#'    scale_colour_gradient(low = "yellow", high = "red", na.value = NA)
#'
scale_colour_gradient <- function(name = waiver(), ..., low = "#132B43",
                                  high = "#56B1F7", space = "Lab",
                                  na.value = "grey50",
                                  guide = "colourbar", aesthetics = "colour") {
  continuous_scale(
    aesthetics, name = name,
    palette = pal_seq_gradient(low, high, space),
    na.value = na.value, guide = guide,
    ...
  )
}

#' @rdname scale_gradient
#' @export
scale_fill_gradient <- function(name = waiver(), ..., low = "#132B43",
                                high = "#56B1F7", space = "Lab",
                                na.value = "grey50", guide = "colourbar",
                                aesthetics = "fill") {
  continuous_scale(
    aesthetics, name = name,
    palette = pal_seq_gradient(low, high, space),
    na.value = na.value, guide = guide,
    ...
  )
}

#' @inheritParams scales::pal_div_gradient
#' @inheritParams continuous_scale
#' @param midpoint The midpoint (in data value) of the diverging scale.
#'   Defaults to 0.
#' @rdname scale_gradient
#' @export
scale_colour_gradient2 <- function(name = waiver(), ..., low = muted("red"),
                                   mid = "white", high = muted("blue"),
                                   midpoint = 0, space = "Lab", na.value = "grey50",
                                   transform = "identity", guide = "colourbar",
                                   aesthetics = "colour") {
  continuous_scale(
    aesthetics, name = name,
    palette = div_gradient_pal(low, mid, high, space),
    na.value = na.value, transform = transform, guide = guide, ...,
    rescaler = mid_rescaler(mid = midpoint, transform = transform)
  )
}

#' @rdname scale_gradient
#' @export
scale_fill_gradient2 <- function(name = waiver(), ..., low = muted("red"),
                                 mid = "white", high = muted("blue"),
                                 midpoint = 0, space = "Lab", na.value = "grey50",
                                 transform = "identity", guide = "colourbar",
                                 aesthetics = "fill") {
  continuous_scale(
    aesthetics, name = name,
    palette = div_gradient_pal(low, mid, high, space),
    na.value = na.value, transform = transform, guide = guide, ...,
    rescaler = mid_rescaler(mid = midpoint, transform = transform)
  )
}

mid_rescaler <- function(mid, transform = "identity",
                         arg = caller_arg(mid), call = caller_env()) {
  transform <- as.trans(transform)
  trans_mid <- transform$transform(mid)
  check_transformation(
    mid, trans_mid, transform$name,
    arg = arg, call = call
  )
  function(x, to = c(0, 1), from = range(x, na.rm = TRUE)) {
    rescale_mid(x, to, from, trans_mid)
  }
}

#' @inheritParams scales::pal_gradient_n
#' @param colours,colors Vector of colours to use for n-colour gradient.
#' @rdname scale_gradient
#' @export
scale_colour_gradientn <- function(name = waiver(), ..., colours, values = NULL,
                                   space = "Lab", na.value = "grey50",
                                   guide = "colourbar", aesthetics = "colour",
                                   colors) {
  colours <- if (missing(colours)) colors else colours

  continuous_scale(
    aesthetics, name = name,
    palette = pal_gradient_n(colours, values, space),
    na.value = na.value, guide = guide, ...
  )
}
#' @rdname scale_gradient
#' @export
scale_fill_gradientn <- function(name = waiver(), ..., colours, values = NULL,
                                 space = "Lab", na.value = "grey50",
                                 guide = "colourbar", aesthetics = "fill",
                                 colors) {
  colours <- if (missing(colours)) colors else colours

  continuous_scale(
    aesthetics, name = name,
    palette = pal_gradient_n(colours, values, space),
    na.value = na.value, guide = guide, ...
  )
}