1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418
|
#' Visualise a data set with a ggvis graphic.
#'
#' \code{ggvis} is used to turn a dataset into a visualisation, setting up
#' default mappings between variables in the dataset and visual properties.
#' Nothing will be displayed until you add additional layers.
#'
#' @param data A data object.
#' @param ... Property mappings. If not named, the first two mappings are
#' taken to be \code{x} and \code{y}. Common properties are \code{x},
#' \code{y}, \code{stroke}, \code{fill}, \code{opacity}, \code{shape}
#' @param env Environment in which to evaluate properties.
#' @import assertthat
#' @importFrom shiny reactive
#' @export
#' @examples
#' # If you don't supply a layer, ggvis uses layer_guess() to guess at
#' # an appropriate type:
#' mtcars %>% ggvis(~mpg, ~wt)
#' mtcars %>% ggvis(~mpg, ~wt, fill = ~cyl)
#' mtcars %>% ggvis(~mpg, ~wt, fill := "red")
#' mtcars %>% ggvis(~mpg)
#'
#' # ggvis has a functional interface: every ggvis function takes a ggvis
#' # an input and returns a modified ggvis as output.
#' layer_points(ggvis(mtcars, ~mpg, ~wt))
#'
#' # To make working with this interface more natural, ggvis imports the
#' # pipe operator from magrittr. x %>% f(y) is equivalent to f(x, y) so
#' # we can rewrite the previous command as
#' mtcars %>% ggvis(~mpg, ~wt) %>% layer_points()
#'
#' # For more complicated plots, add a line break after %>%
#' mtcars %>%
#' ggvis(~mpg, ~wt) %>%
#' layer_points() %>%
#' layer_smooths()
ggvis <- function(data = NULL, ..., env = parent.frame()) {
vis <- structure(
list(
marks = list(),
data = list(),
props = list(),
reactives = list(),
scales = list(),
axes = list(),
legends = list(),
controls = list(),
connectors = list(),
handlers = list(),
options = list(),
cur_data = NULL,
cur_props = NULL,
cur_vis = NULL
),
class = "ggvis"
)
vis <- add_data(vis, data, deparse2(substitute(data)))
vis <- add_props(vis, ..., env = env)
vis
}
#' Add visual properties to a visualisation
#'
#' @param vis Visualisation to modify.
#' @inheritParams props
#' @export
#' @examples
#' mtcars %>% ggvis(~wt, ~mpg) %>% layer_points()
#' mtcars %>% ggvis() %>% add_props(~wt, ~mpg) %>% layer_points()
#' mtcars %>% ggvis(~wt) %>% add_props(y = ~mpg) %>% layer_points()
add_props <- function(vis, ..., .props = NULL, inherit = NULL,
env = parent.frame()) {
# Get value of inherit from inherit arg, then .props$inherit, then TRUE
if (!is.null(.props)) inherit <- attr(.props, "inherit", TRUE)
inherit <- inherit %||% TRUE
new_props <- props(..., .props = .props, inherit = inherit, env = env)
both_props <- merge_props(cur_props(vis), new_props)
vis$props[[length(vis$props) + 1]] <- both_props
vis$cur_props <- both_props
vis <- register_reactives(vis, extract_reactives(both_props))
vis
}
#' Add dataset to a visualisation
#'
#' @param vis Visualisation to modify.
#' @param data Data set to add.
#' @param name Data of data - optional, but helps produce informative
#' error messages.
#' @param add_suffix Should a unique suffix be added to the data object's ID?
#' This should only be FALSE when the spec requires a data set with a
#' specific name.
#' @export
#' @examples
#' mtcars %>% ggvis(~mpg, ~wt) %>% layer_points()
#' NULL %>% ggvis(~mpg, ~wt) %>% add_data(mtcars) %>% layer_points()
add_data <- function(vis, data, name = deparse2(substitute(data)),
add_suffix = TRUE) {
if (is.null(data)) return(vis)
# Make sure data is reactive
if (!shiny::is.reactive(data)) {
static_data <- data
data <- function() static_data
}
if (add_suffix) name <- paste0(name, length(vis$data))
data_id(data) <- name
vis$data[[name]] <- data
vis$cur_data <- data
vis
}
#' Is an object a ggvis object?
#'
#' @export
#' @param x an object to test
#' @keywords internal
is.ggvis <- function(x) inherits(x, "ggvis")
# Add a mark to a ggvis object.
add_mark <- function(vis, type = NULL, props = NULL, data = NULL,
data_name = "unnamed_data") {
# Save current data
old_data <- vis$cur_data
old_props <- vis$cur_props
# If we're in a subvis, modify scale names to include prefix
# FIXME: figure out how to avoid this in order to specify parent scales
# Maybe some attribute? e.g. scale = parent("x")
if (!is.null(vis$cur_vis)) {
suffix <- paste0(vis$cur_vis, collapse = "-")
props <- lapply(props, function(x) {
if (identical(x$scale, FALSE)) return(x)
x$scale <- paste0(x$scale, suffix)
x
})
}
vis <- add_data(vis, data, data_name)
vis <- add_props(vis, .props = props)
vis <- register_scales_from_props(vis, cur_props(vis))
new_mark <- mark(type, props = cur_props(vis), data = vis$cur_data)
vis <- append_ggvis(vis, "marks", new_mark)
# Restore old data
vis$cur_data <- old_data
vis$cur_props <- old_props
vis
}
#' Add arbitrary scales to ggvis.
#'
#' @param vis Visualisation to modify.
#' @param scale Scale object
#' @param domain Either a vector with static values for the domain, or
#' a reactive that returns a such a vector.
#' @param data_domain Should the domain be controlled by a data set which is
#' added to the spec? Should only be set to FALSE in special cases.
#' @keywords internal
#' @export
add_scale <- function(vis, scale, data_domain = TRUE) {
if (data_domain && shiny::is.reactive(scale$domain)) {
vis <- register_reactive(vis, scale$domain)
}
vis <- append_ggvis(vis, "scales", scale)
vis
}
# If replace is TRUE, new options overwrite existing options; if FALSE, they don't.
add_options <- function(vis, options, replace = TRUE) {
if (replace) {
vis$options <- merge_vectors(vis$options, options)
} else {
vis$options <- merge_vectors(options, vis$options)
}
vis
}
register_computation <- function(vis, args, name, transform = NULL) {
vis <- register_reactives(vis, args)
if (is.null(transform)) return(vis)
parent_data <- vis$cur_data
# For the ID, append to the parent's ID, along with a unique number.
id <- paste0(data_id(parent_data), "/", name, length(vis$data))
if (shiny::is.reactive(parent_data) || any_apply(args, shiny::is.reactive)) {
empty <- NULL
# First time computation is executed, it must succeed. That's used to
# determine the specification of the data, and if an error occurs in
# subequent run, that specification is sent and the error is printed to
# the console
new_data <- reactive({
if (is.null(empty)) {
out <- transform(parent_data(), values(args))
empty <<- out[0, , drop = FALSE]
out
} else {
tryCatch(
transform(parent_data(), values(args)),
error = function(e) {
message("Error: ", e$message)
data.frame
}
)
}
})
} else {
cache <- transform(parent_data(), args)
new_data <- function() cache
}
data_id(new_data) <- id
vis$data[[id]] <- new_data
vis$cur_data <- new_data
vis
}
# Register a list of reactives in the ggvis object's reactives list
# @param vis A ggvis object.
# @param reactives A list of reactives.
register_reactives <- function(vis, reactives = NULL) {
# Drop any objects from the 'reactives' list which aren't actually reactive
reactives <- reactives[vapply(reactives, shiny::is.reactive, logical(1))]
for (reactive in reactives) {
vis <- register_reactive(vis, reactive)
}
vis
}
register_reactive <- function(vis, reactive) {
# Some reactives are marked so that they're not registered
if (identical(attr(reactive, "register"), FALSE)) return(vis)
# Add reactive id if needed
if (is.null(reactive_id(reactive))) {
reactive_id(reactive) <- rand_id("reactive_")
}
label <- reactive_id(reactive)
# Don't add if already registered
if (label %in% names(vis$reactives)) return(vis)
vis$reactives[[label]] <- reactive
# If it's a broker, add controls, connector, and spec as needed
if (is.broker(reactive)) {
broker <- attr(reactive, "broker", TRUE)
vis <- register_controls(vis, broker$controls)
vis <- register_connector(vis, broker$connect)
vis <- register_handler(vis, broker$spec)
}
vis
}
# Given a set of props, register a scale for each one.
register_scales_from_props <- function(vis, props) {
# Strip off .update, .enter, etc.
names(props) <- trim_prop_event(names(props))
# Get a reactive for each scaled prop
data <- vis$cur_data
add_scale_from_prop <- function(vis, prop) {
# Automatically add label, unless it's blank or has a trailing '_'
label <- prop_label(prop)
if (label == "" || grepl("_$", label)) {
label <- NULL
}
if (is.prop_band(prop)) {
# band() requires points = FALSE
vis <- add_scale(
vis,
ggvis_scale(property = propname_to_scale(prop$property),
name = prop$scale, points = FALSE, label = label)
)
return(vis)
}
if (is.null(prop$value) || !prop_is_scaled(prop) || is.null(data)) {
return(vis)
}
type <- vector_type(shiny::isolate(prop_value(prop, data())))
domain <- reactive({
data_range(prop_value(prop, data()))
})
# Flag to not register this reactive in the ggvis reactives list. This is
# so that these reactives don't make is.dynamic() think that the plot is
# dynamic.
attr(domain, "register") <- FALSE
# e.g. scale_quantitative, scale_nominal
scale_fun <- match.fun(paste0("scale_", type))
vis <- scale_fun(vis, property = prop$property, name = prop$scale,
label = label, domain = domain, override = FALSE)
vis
}
# Add them to the vis
for (i in seq_along(props)) {
vis <- add_scale_from_prop(vis, props[[i]])
}
vis
}
# Takes a list of controls
register_controls <- function(vis, controls) {
if (empty(controls)) return(vis)
# If passed a bare control, wrap it into a list
if (inherits(controls, "shiny.tag")) {
controls <- list(controls)
}
vis$controls <- c(vis$controls, controls)
vis
}
register_connector <- function(vis, connector) {
vis$connectors <- c(vis$connectors, connector)
vis
}
register_handler <- function(vis, handler) {
if(empty(handler)) return(vis)
vis$handlers <- c(vis$handlers, list(handler))
vis
}
#' Print out the vega plot specification
#'
#' @param vis Visualisation to print
#' @param pieces Optional, a character or numeric vector used to
#' pull out selected pieces of the spec
#' @export
#' @examples
#' base <- mtcars %>% ggvis(~mpg, ~wt) %>% layer_points()
#' base %>% show_spec()
#' base %>% show_spec("scales")
show_spec <- function(vis, pieces = NULL) {
out <- as.vega(vis, dynamic = FALSE)
if (!is.null(pieces)) {
out <- out[pieces]
}
json <- jsonlite::toJSON(out, pretty = TRUE, auto_unbox = TRUE, force = TRUE,
null = "null")
cat(gsub("\t", " ", json), "\n", sep = "")
invisible(vis)
}
#' Tools to save and view static specs.
#'
#' These functions are mainly useful for testing.
#'
#' @param path location to save spec to, or load spec from
#' @param x a ggvis object
#' @param ... other arguments passed to \code{as.vega}
#' @keywords internal
#' @export
save_spec <- function(x, path, ...) {
assert_that(is.ggvis(x), is.string(path))
json <- jsonlite::toJSON(as.vega(x, ...), pretty = TRUE, auto_unbox = TRUE,
force = TRUE, null = "null")
writeLines(json, path)
}
#' @rdname save_spec
view_spec <- function(path, ...) {
contents <- paste0(readLines(path), collapse = "\n")
spec <- jsonlite::fromJSON(contents)
view_static(spec)
}
append_ggvis <- function(vis, field, x) {
i <- vis$cur_vis
if (length(i) == 0) {
vis[[field]] <- c(vis[[field]], list(x))
} else if (length(i) == 1) {
vis$marks[[i]][[field]] <- c(vis$marks[[i]][[field]], list(x))
} else if (length(i) == 2) {
vis$marks[[i[1]]]$marks[[i[2]]][[field]] <-
c(vis$marks[[i[1]]]$marks[[i[2]]][[field]], list(x))
} else {
stop(">3 levels deep? You must be crazy!", call. = FALSE)
}
vis
}
|