1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93
|
% Generated by roxygen2 (4.1.1): do not edit by hand
% Please edit documentation in R/foreign.R
\name{graph_from_graphdb}
\alias{graph.graphdb}
\alias{graph_from_graphdb}
\title{Load a graph from the graph database for testing graph isomorphism.}
\usage{
graph_from_graphdb(url = NULL, prefix = "iso", type = "r001",
nodes = NULL, pair = "A", which = 0,
base = "http://cneurocvs.rmki.kfki.hu/graphdb/gzip", compressed = TRUE,
directed = TRUE)
}
\arguments{
\item{url}{If not \code{NULL} it is a complete URL with the file to import.}
\item{prefix}{Gives the prefix. See details below. Possible values:
\code{iso}, \code{i2}, \code{si4}, \code{si6}, \code{mcs10}, \code{mcs30},
\code{mcs50}, \code{mcs70}, \code{mcs90}.}
\item{type}{Gives the graph type identifier. See details below. Possible
values: \code{r001}, \code{r005}, \code{r01}, \code{r02}, \code{m2D},
\code{m2Dr2}, \code{m2Dr4}, \code{m2Dr6} \code{m3D}, \code{m3Dr2},
\code{m3Dr4}, \code{m3Dr6}, \code{m4D}, \code{m4Dr2}, \code{m4Dr4},
\code{m4Dr6}, \code{b03}, \code{b03m}, \code{b06}, \code{b06m}, \code{b09},
\code{b09m}.}
\item{nodes}{The number of vertices in the graph.}
\item{pair}{Specifies which graph of the pair to read. Possible values:
\code{A} and \code{B}.}
\item{which}{Gives the number of the graph to read. For every graph type
there are a number of actual graphs in the database. This argument specifies
which one to read.}
\item{base}{The base address of the database. See details below.}
\item{compressed}{Logical constant, if TRUE than the file is expected to be
compressed by gzip. If \code{url} is \code{NULL} then a \sQuote{\code{.gz}}
suffix is added to the filename.}
\item{directed}{Logical constant, whether to create a directed graph.}
}
\value{
A new graph object.
}
\description{
This function downloads a graph from a database created for the evaluation
of graph isomorphism testing algothitms.
}
\details{
\code{graph_from_graphdb} reads a graph from the graph database from an FTP or
HTTP server or from a local copy. It has two modes of operation:
If the \code{url} argument is specified then it should the complete path to
a local or remote graph database file. In this case we simply call
\code{\link{read_graph}} with the proper arguments to read the file.
If \code{url} is \code{NULL}, and this is the default, then the filename is
assembled from the \code{base}, \code{prefix}, \code{type}, \code{nodes},
\code{pair} and \code{which} arguments.
Unfortunately the original graph database homepage is now defunct, but see
its old version at
\url{http://web.archive.org/web/20090215182331/http://amalfi.dis.unina.it/graph/db/doc/graphdbat.html}
for the actual format of a graph database file and other information.
}
\examples{
\dontrun{
g <- graph_from_graphdb(prefix="iso", type="r001", nodes=20, pair="A",
which=10, compressed=TRUE)
g2 <- graph_from_graphdb(prefix="iso", type="r001", nodes=20, pair="B",
which=10, compressed=TRUE)
graph.isomorphic.vf2(g, g2) \% should be TRUE
g3 <- graph_from_graphdb(url=paste(sep="/",
"http://cneurocvs.rmki.kfki.hu",
"graphdb/gzip/iso/bvg/b06m",
"iso_b06m_m200.A09.gz"))
}
}
\author{
Gabor Csardi \email{csardi.gabor@gmail.com}
}
\references{
M. De Santo, P. Foggia, C. Sansone, M. Vento: A large database
of graphs and its use for benchmarking graph isomorphism algorithms,
\emph{Pattern Recognition Letters}, Volume 24, Issue 8 (May 2003)
}
\seealso{
\code{\link{read_graph}}, \code{\link{graph.isomorphic.vf2}}
}
\keyword{graphs}
|