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## ----------------------------------------------------------------------
##
## IGraph R package
## Copyright (C) 2014 Gabor Csardi <csardi.gabor@gmail.com>
## 334 Harvard street, Cambridge, MA 02139 USA
##
## This program is free software; you can redistribute it and/or modify
## it under the terms of the GNU General Public License as published by
## the Free Software Foundation; either version 2 of the License, or
## (at your option) any later version.
##
## This program is distributed in the hope that it will be useful,
## but WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
## GNU General Public License for more details.
##
## You should have received a copy of the GNU General Public License
## along with this program; if not, write to the Free Software
## Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA
## 02110-1301 USA
##
## ----------------------------------------------------------------------
# format versions
ver_0_1_1 <- 0L # 0.1.1
ver_0_4 <- 1L # 0.4
ver_0_7_999 <- 2L # 0.7.999
ver_0_8 <- 3L # 0.8
ver_1_5_0 <- 4L # 1.5.0
pkg_graph_version <- ver_1_5_0
#' igraph data structure versions
#'
#' igraph's internal data representation changes sometimes between
#' versions. This means that it is not always possible to use igraph objects
#' that were created (and possibly saved to a file) with an older
#' igraph version.
#'
#' `graph_version()` queries the current data format,
#' or the data format of a possibly older igraph graph.
#'
#' [upgrade_graph()] can convert an older data format
#' to the current one.
#'
#' @param graph The input graph. If it is missing, then
#' the version number of the current data format is returned.
#' @return An integer scalar.
#'
#' @seealso upgrade_graph to convert the data format of a graph.
#' @family versions
#' @export
graph_version <- function(graph) {
if (missing(graph)) {
return(pkg_graph_version)
}
# Don't call is_igraph() here to avoid recursion
stopifnot(inherits(graph, "igraph"))
.Call(R_igraph_graph_version, graph)
}
#' igraph data structure versions
#'
#' igraph's internal data representation changes sometimes between
#' versions. This means that it is not possible to use igraph objects
#' that were created (and possibly saved to a file) with an older
#' igraph version.
#'
#' [graph_version()] queries the current data format,
#' or the data format of a possibly older igraph graph.
#'
#' `upgrade_graph()` can convert an older data format
#' to the current one.
#'
#' @param graph The input graph.
#' @return The graph in the current format.
#'
#' @seealso graph_version to check the current data format version
#' or the version of a graph.
#' @family versions
#' @export
upgrade_graph <- function(graph) {
# Don't call is_igraph() here to avoid recursion
stopifnot(inherits(graph, "igraph"))
g_ver <- graph_version(graph)
p_ver <- graph_version()
if (g_ver == p_ver) {
return(graph)
}
if (g_ver > p_ver) {
cli::cli_abort(
"Don't know how to downgrade graph from version {g_ver} to {p_ver}."
)
}
# g_ver < p_ver
if (g_ver == ver_0_4) {
graph <- .Call(R_igraph_add_env, graph)
} else if (g_ver == ver_0_7_999) {
# Not observed in the wild
.Call(R_igraph_add_myid_to_env, graph)
.Call(R_igraph_add_version_to_env, graph)
} else if (g_ver == ver_0_8) {
.Call(R_igraph_add_version_to_env, graph)
graph <- unclass(graph)
graph[igraph_t_idx_oi:igraph_t_idx_is] <- list(NULL)
class(graph) <- "igraph"
# Calling for side effect: error if R_SEXP_to_igraph() fails, create native igraph,
# update "me" element of environment
V(graph)
graph
} else {
cli::cli_abort(
"Don't know how to upgrade graph from version {g_ver} to {p_ver}."
)
}
}
## Check that the version is the latest
warn_version <- function(graph) {
# Calling for side effect: error if R_SEXP_to_igraph() fails
# Don't call vcount_impl() to avoid recursion
.Call(R_igraph_vcount, graph)
# graph_version() calls is_igraph(), but that function must call warn_version() for safety
their_version <- .Call(R_igraph_graph_version, graph)
if (pkg_graph_version == their_version) {
return(FALSE)
}
if (pkg_graph_version > their_version) {
cli::cli_inform(c(
"This graph was created by an old(er) igraph version.",
i = "Call {.fun igraph::upgrade_graph} on it to use with the current igraph version.",
"For now we convert it on the fly..."
))
# In-place upgrade:
# - The igraph element in the igraph_t_idx_env component will be added
# transparently because it's missing.
# - The components igraph_t_idx_oi, igraph_t_idx_ii, igraph_t_idx_os,
# igraph_t_idx_is are ignored, but we can't do much about the contents.
# Users will have to call upgrade_graph(), but this is what the message
# is about.
if (pkg_graph_version <= ver_1_5_0) {
.Call(R_igraph_add_version_to_env, graph)
}
return(TRUE)
}
cli::cli_abort(
"This graph was created by a newer igraph version.
Please install the latest version of igraph and try again."
)
}
oldpredecessors <- function() {
c(
"1.5.0" = "1.4.3",
"1.0.0" = "0.7.1",
"0.6" = "0.5.5-4",
"0.5" = "0.4.5",
"0.2" = "0.1.2",
"0.1.1" = NA
)
}
oldsamples <- function() {
list(
"1.5.0" = oldsample_1_5_0(),
"1.0.0" = oldsample_1_0_0(),
"0.6" = oldsample_0_6(),
"0.5" = oldsample_0_5(),
"0.2" = oldsample_0_2(),
"0.1.1" = oldsample_0_1_1()
)
}
clear_native_ptr <- function(g) {
gx <- unclass(g)
gx[[igraph_t_idx_env]]$igraph <- NULL
g
}
#' Query igraph's version string
#'
#' @description
#' `r lifecycle::badge("deprecated")`
#'
#' `igraph.version()` was renamed to [igraph_version()] to create a more
#' consistent API.
#'
#' @keywords internal
#' @export
igraph.version <- function() {
# nocov start
lifecycle::deprecate_soft("2.0.0", "igraph.version()", "igraph_version()")
igraph_version()
} # nocov end
# R_igraph_vers -----------------------------------------------------------------------
#' Query igraph's version string
#'
#' Returns the R package version,
#' prints the R package version and C library version.
#'
#' @return A character scalar, the igraph version string, with an attribute
#' `"c_version"` giving the C library version string.
#' @author Gabor Csardi \email{csardi.gabor@@gmail.com}
#' @keywords graphs
#' @keywords internal
#' @export
#' @examples
#' igraph_version()
#'
igraph_version <- function() {
r_version <- getNamespaceInfo("igraph", "spec")[["version"]]
version <- structure(
r_version,
class = c("igraph_version", class(r_version)),
c_version = c_version()
)
invisible(version)
}
#' @export
print.igraph_version <- function(x, ...) {
writeLines(paste0("R version: ", x))
writeLines(paste0("C version: ", attr(x, "c_version")))
invisible(x)
}
c_version <- function() {
version_impl()[["version_string"]]
}
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