1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133
|
% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/par.R
\name{igraph_options}
\alias{igraph_options}
\alias{igraph_opt}
\title{Parameters for the igraph package}
\usage{
igraph_options(...)
igraph_opt(x, default = NULL)
}
\arguments{
\item{\dots}{A list may be given as the only argument, or any number of
arguments may be in the \code{name=value} form, or no argument at all may be
given. See the Value and Details sections for explanation.}
\item{x}{A character string holding an option name.}
\item{default}{If the specified option is not set in the options list, this
value is returned. This facilitates retrieving an option and checking
whether it is set and setting it separately if not.}
}
\value{
\code{igraph_options()} returns a list with the old values of the
updated parameters, invisibly. Without any arguments, it returns the
values of all options.
For \code{igraph_opt()}, the current value set for option \code{x}, or
\code{NULL} if the option is unset.
}
\description{
igraph has some parameters which (usually) affect the behavior of many
functions. These can be set for the whole session via \code{igraph_options()}.
}
\details{
The parameter values set via a call to the \code{igraph_options()} function
will remain in effect for the rest of the session, affecting the subsequent
behaviour of the other functions of the \code{igraph} package for which the
given parameters are relevant.
This offers the possibility of customizing the functioning of the
\code{igraph} package, for instance by insertions of appropriate calls to
\code{igraph_options()} in a load hook for package \pkg{igraph}.
The currently used parameters in alphabetical order:
\describe{
\item{add.params}{
Logical scalar, whether to add model parameter to the graphs
that are created by the various graph constructors.
By default it is \code{TRUE}.
}
\item{add.vertex.names}{
Logical scalar, whether to add vertex names to node level indices,
like degree, betweenness scores, etc.
By default it is \code{TRUE}.
}
\item{annotate.plot}{
Logical scalar, whether to annotate igraph plots
with the graph's name (\code{name} graph attribute, if present) as \code{main},
and with the number of vertices and edges as \code{xlab}.
Defaults to \code{FALSE}.
}
\item{dend.plot.type}{
The plotting function to use when plotting community structure dendrograms via \code{\link[=plot_dendrogram]{plot_dendrogram()}}.
Possible values are \sQuote{auto} (the default), \sQuote{phylo}, \sQuote{hclust} and \sQuote{dendrogram}.
See \code{\link[=plot_dendrogram]{plot_dendrogram()}} for details.
}
\item{edge.attr.comb}{
Specifies what to do with the edge attributes if the graph is modified.
The default value is \code{list(weight="sum", name="concat", "ignore")}.
See \code{\link[=attribute.combination]{attribute.combination()}} for details on this.
}
\item{print.edge.attributes}{
Logical constant, whether to print edge attributes when printing graphs.
Defaults to \code{FALSE}.
}
\item{print.full}{
Logical scalar, whether \code{\link[=print.igraph]{print.igraph()}} should show the graph structure as well,
or only a summary of the graph.
}
\item{print.graph.attributes}{
Logical constant, whether to print graph attributes when printing graphs. Defaults to \code{FALSE}.
}
\item{print.vertex.attributes}{
Logical constant, whether to print vertex attributes when printing graphs. Defaults to \code{FALSE}.
}
\item{return.vs.es}{
Whether functions that return a set or sequence of vertices/edges
should return formal vertex/edge sequence objects.
This option was introduced in igraph version 1.0.0 and defaults to TRUE.
If your package requires the old behavior, you can set it to FALSE in the \code{.onLoad} function of your package,
without affecting other packages.
}
\item{sparsematrices}{
Whether to use the \code{Matrix} package for (sparse) matrices.
It is recommended, if the user works with larger graphs.
}
\item{verbose}{
Logical constant, whether igraph functions should talk more than minimal.
E.g. if \code{TRUE} then some functions will use progress bars while computing. Defaults to \code{FALSE}.
}
\item{vertex.attr.comb}{
Specifies what to do with the vertex attributes if the graph is modified.
The default value is \code{list(name="concat", "ignore")}.
See \code{\link[=attribute.combination]{attribute.combination()}} for details on this.
}
}
}
\examples{
oldval <- igraph_opt("verbose")
igraph_options(verbose = TRUE)
layout_with_kk(make_ring(10))
igraph_options(verbose = oldval)
oldval <- igraph_options(verbose = TRUE, sparsematrices = FALSE)
make_ring(10)[]
igraph_options(oldval)
igraph_opt("verbose")
}
\seealso{
\code{igraph_options()} is similar to \code{\link[=options]{options()}} and
\code{igraph_opt()} is similar to \code{\link[=getOption]{getOption()}}.
Other igraph options:
\code{\link{with_igraph_opt}()}
}
\author{
Gabor Csardi \email{csardi.gabor@gmail.com}
}
\concept{igraph options}
\keyword{graphs}
|