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useDynLib(mclust)
# useDynLib(mclust, .registration = TRUE)
# Export all names
# exportPattern(".")
# Import all packages listed as Imports or Depends
import("stats", "utils", "graphics", "grDevices")
# export(.mclust)
export(mclust.options, emControl)
export(em, emE, emEEE, emEEI, emEEV, emEII, emEVI,
emV, emVEI, emVEV, emVII, emVVI, emVVV,
emEVV, emVEE, emEVE, emVVE,
emX, emXII, emXXI, emXXX)
export(me, meE, meEEE, meEEI, meEEV, meEII, meEVI,
meV, meVEI, meVEV, meVII, meVVI, meVVV,
meEVV, meVEE, meEVE, meVVE,
meX, meXII, meXXI, meXXX)
export(sim, simE, simEEE, simEEI, simEEV, simEII, simEVI,
simV, simVEI, simVEV, simVII, simVVI, simVVV,
simEVV, simVEE, simEVE, simVVE)
export(estep, estepE, estepEEE, estepEEI, estepEEV, estepEII, estepEVI,
estepV, estepVEI, estepVEV, estepVII, estepVVI, estepVVV,
estepEVV, estepVEE, estepEVE, estepVVE)
export(mstep, mstepE, mstepEEE, mstepEEI, mstepEEV, mstepEII, mstepEVI,
mstepV, mstepVEI, mstepVEV, mstepVII, mstepVVI, mstepVVV,
mstepEVV, mstepVEE, mstepEVE, mstepVVE)
export(mvn, mvnX, mvnXII, mvnXXI, mvnXXX)
export(cdens, cdensE, cdensEEE, cdensEEI, cdensEEV, cdensEII, cdensEVI,
cdensV, cdensVEI, cdensVEV, cdensVII, cdensVVI, cdensVVV,
cdensEVV, cdensVEE, cdensEVE, cdensVVE,
cdensX, cdensXII, cdensXXI, cdensXXX)
export(bic, pickBIC, mclustBICupdate)
export(mclustLoglik, print.mclustLoglik)
S3method("print", "mclustLoglik")
export(nVarParams, nMclustParams)
export(map, unmap, partconv, partuniq, errorBars)
export(mclustModel, mclustModelNames, checkModelName, mclustVariance)
export(decomp2sigma, sigma2decomp)
export(imputeData, imputePairs, matchCluster, majorityVote)
export(mapClass, classError, adjustedRandIndex, BrierScore)
export(logsumexp, softmax)
export(mclust1Dplot, mclust2Dplot, mvn2plot, surfacePlot, uncerPlot)
export(clPairs, clPairsLegend,
coordProj, randProj,
randomOrthogonalMatrix)
export(priorControl, defaultPrior, hypvol)
export(hc, print.hc, plot.hc)
S3method("print", "hc")
S3method("plot", "hc")
export(hcE, hcEEE, hcEII, hcV, hcVII, hcVVV)
export(hclass, hcRandomPairs, randomPairs, dupPartition, as.hclust.hc)
S3method("as.hclust", "hc")
export(mclustBIC, print.mclustBIC, summary.mclustBIC,
print.summary.Mclust, plot.mclustBIC,
summaryMclustBIC, summaryMclustBICn)
S3method("print", "mclustBIC")
S3method("summary", "mclustBIC")
S3method("print", "summary.mclustBIC")
S3method("plot", "mclustBIC")
export(Mclust, print.Mclust, summary.Mclust, print.summary.Mclust, plot.Mclust,
predict.Mclust, logLik.Mclust)
S3method("print", "Mclust")
S3method("summary", "Mclust")
S3method("print", "summary.Mclust")
S3method("plot", "Mclust")
S3method("predict", "Mclust")
S3method("logLik", "Mclust")
export(densityMclust, plot.densityMclust, dens, predict.densityMclust,
cdfMclust, quantileMclust, densityMclust.diagnostic,
plotDensityMclust1, plotDensityMclust2, plotDensityMclustd)
S3method("plot", "densityMclust")
S3method("predict", "densityMclust")
export(MclustDA, print.MclustDA, summary.MclustDA, print.summary.MclustDA,
plot.MclustDA, predict.MclustDA, cvMclustDA, getParameters.MclustDA,
logLik.MclustDA, classPriorProbs)
S3method("print", "MclustDA")
S3method("summary", "MclustDA")
S3method("print", "summary.MclustDA")
S3method("plot", "MclustDA")
S3method("predict", "MclustDA")
S3method("logLik", "MclustDA")
export(MclustSSC, print.MclustSSC, summary.MclustSSC, print.summary.MclustSSC,
plot.MclustSSC, predict.MclustSSC)
S3method("print", "MclustSSC")
S3method("summary", "MclustSSC")
S3method("print", "summary.MclustSSC")
S3method("plot", "MclustSSC")
S3method("predict", "MclustSSC")
export(MclustDR, print.MclustDR, summary.MclustDR, print.summary.MclustDR,
plot.MclustDR, plotEvalues.MclustDR, projpar.MclustDR,
predict.MclustDR, predict2D.MclustDR)
S3method("print", "MclustDR")
S3method("summary", "MclustDR")
S3method("print", "summary.MclustDR")
S3method("plot", "MclustDR")
S3method("predict", "MclustDR")
export(MclustDRsubsel,
MclustDRsubsel_cluster, MclustDRsubsel_classif,
MclustDRsubsel1cycle, MclustDRrecoverdir,
print.MclustDRsubsel, summary.MclustDRsubsel)
S3method("print", "MclustDRsubsel")
S3method("summary", "MclustDRsubsel")
export(me.weighted, covw, hdrlevels, dmvnorm)
export(icl, mclustICL, print.mclustICL,
summary.mclustICL, print.summary.mclustICL,
plot.mclustICL)
S3method("icl", "Mclust")
S3method("icl", "MclustDA")
S3method("print", "mclustICL")
S3method("summary", "mclustICL")
S3method("print", "summary.mclustICL")
S3method("plot", "mclustICL")
export(mclustBootstrapLRT, print.mclustBootstrapLRT, plot.mclustBootstrapLRT)
S3method("print", "mclustBootstrapLRT")
S3method("plot", "mclustBootstrapLRT")
export(MclustBootstrap, print.MclustBootstrap,
summary.MclustBootstrap, print.summary.MclustBootstrap,
plot.MclustBootstrap)
S3method("print", "MclustBootstrap")
S3method("summary", "MclustBootstrap")
S3method("print", "summary.MclustBootstrap")
S3method("plot", "MclustBootstrap")
export(as.Mclust, as.Mclust.default, as.Mclust.densityMclust)
S3method("as.Mclust", "default")
S3method("as.Mclust", "densityMclust")
export(as.densityMclust, as.densityMclust.default, as.densityMclust.Mclust)
S3method("as.densityMclust", "default")
S3method("as.densityMclust", "Mclust")
export(clustCombi, print.clustCombi,
summary.clustCombi, print.summary.clustCombi,
plot.clustCombi, combiPlot, entPlot, combiTree,
combMat, clustCombiOptim)
S3method("plot", "clustCombi")
S3method("print", "clustCombi")
S3method("summary", "clustCombi")
S3method("print", "summary.clustCombi")
export(gmmhd, print.gmmhd,
summary.gmmhd, print.summary.gmmhd,
plot.gmmhd,
gmmhdClusterCores, gmmhdClassify)
S3method("print", "gmmhd")
S3method("summary", "gmmhd")
S3method("print", "summary.gmmhd")
S3method("plot", "gmmhd")
export(crimcoords, print.crimcoords,
summary.crimcoords, print.summary.crimcoords,
plot.crimcoords)
S3method("print", "crimcoords")
S3method("summary", "crimcoords")
S3method("print", "summary.crimcoords")
S3method("plot", "crimcoords")
# deprecated functions
export(cv.MclustDA, cv1EMtrain, bicEMtrain)
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