File: dat.nielweise2008.Rd

package info (click to toggle)
r-cran-metadat 1.2-0-2
  • links: PTS, VCS
  • area: main
  • in suites: bookworm, forky, sid, trixie
  • size: 2,108 kB
  • sloc: sh: 13; makefile: 2
file content (62 lines) | stat: -rw-r--r-- 3,299 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
\name{dat.nielweise2008}
\docType{data}
\alias{dat.nielweise2008}
\title{Studies on Anti-Infective-Treated Central Venous Catheters for Prevention of Catheter-Related Bloodstream Infections}
\description{Results from 18 studies comparing the risk of catheter-related bloodstream infection when using anti-infective-treated versus standard catheters for total parenteral nutrition or chemotherapy.}
\usage{
dat.nielweise2008
}
\format{The data frame contains the following columns:
\tabular{lll}{
\bold{study}   \tab \code{numeric}   \tab study number \cr
\bold{authors} \tab \code{character} \tab study authors \cr
\bold{year}    \tab \code{numeric}   \tab publication year \cr
\bold{x1i}     \tab \code{numeric}   \tab number of CRBSIs in patients receiving an anti-infective catheter \cr
\bold{t1i}     \tab \code{numeric}   \tab total number of catheter days for patients receiving an anti-infective catheter \cr
\bold{x2i}     \tab \code{numeric}   \tab number of CRBSIs in patients receiving a standard catheter \cr
\bold{t2i}     \tab \code{numeric}   \tab total number of catheter days for patients receiving a standard catheter
}
}
\details{
   The use of a central venous catheter may lead to a catheter-related bloodstream infection (CRBSI), which in turn increases the risk of morbidity and mortality. Anti-infective-treated catheters have been developed that are meant to reduce the risk of CRBSIs. Niel-Weise et al. (2008) conducted a meta-analysis of studies comparing infection risk when using anti-infective-treated versus standard catheters for total parenteral nutrition or chemotherapy. The results from 9 such studies are included in this dataset.

   The dataset was used in the article by Stijnen et al. (2010) to illustrate various generalized linear mixed-effects models for the meta-analysis of incidence rates and incidence rate ratios (see \sQuote{References}).
}
\source{
   Niel-Weise, B. S., Stijnen, T., & van den Broek, P. J. (2008). Anti-infective-treated central venous catheters for total parenteral nutrition or chemotherapy: A systematic review. \emph{Journal of Hospital Infection}, \bold{69}(2), 114--123. \verb{https://doi.org/10.1016/j.jhin.2008.02.020}
}
\references{
   Stijnen, T., Hamza, T. H., & Ozdemir, P. (2010). Random effects meta-analysis of event outcome in the framework of the generalized linear mixed model with applications in sparse data. \emph{Statistics in Medicine}, \bold{29}(29), 3046--3067. \verb{https://doi.org/10.1002/sim.4040}
}
\author{
   Wolfgang Viechtbauer, \email{wvb@metafor-project.org}, \url{https://www.metafor-project.org}
}
\examples{
### copy data into 'dat' and examine data
dat <- dat.nielweise2008
dat

\dontrun{

### load metafor package
library(metafor)

### standard (inverse-variance) random-effects model
res <- rma(measure="IRR", x1i=x1i, t1i=t1i, x2i=x2i, t2i=t2i, data=dat)
print(res, digits=3)
predict(res, transf=exp, digits=2)

### random-effects conditional Poisson model
res <- rma.glmm(measure="IRR", x1i=x1i, t1i=t1i, x2i=x2i, t2i=t2i, data=dat, model="CM.EL")
print(res, digits=3)
predict(res, transf=exp, digits=2)

}
}
\keyword{datasets}
\concept{medicine}
\concept{incidence rates}
\concept{generalized linear models}
\section{Concepts}{
   medicine, incidence rates, generalized linear models
}