File: Rvmmin.bib

package info (click to toggle)
r-cran-optimx 2020-4.2%2Bdfsg-2
  • links: PTS, VCS
  • area: main
  • in suites: bullseye
  • size: 1,492 kB
  • sloc: sh: 21; makefile: 5
file content (2033 lines) | stat: -rw-r--r-- 58,657 bytes parent folder | download | duplicates (2)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
1042
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
1054
1055
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080
1081
1082
1083
1084
1085
1086
1087
1088
1089
1090
1091
1092
1093
1094
1095
1096
1097
1098
1099
1100
1101
1102
1103
1104
1105
1106
1107
1108
1109
1110
1111
1112
1113
1114
1115
1116
1117
1118
1119
1120
1121
1122
1123
1124
1125
1126
1127
1128
1129
1130
1131
1132
1133
1134
1135
1136
1137
1138
1139
1140
1141
1142
1143
1144
1145
1146
1147
1148
1149
1150
1151
1152
1153
1154
1155
1156
1157
1158
1159
1160
1161
1162
1163
1164
1165
1166
1167
1168
1169
1170
1171
1172
1173
1174
1175
1176
1177
1178
1179
1180
1181
1182
1183
1184
1185
1186
1187
1188
1189
1190
1191
1192
1193
1194
1195
1196
1197
1198
1199
1200
1201
1202
1203
1204
1205
1206
1207
1208
1209
1210
1211
1212
1213
1214
1215
1216
1217
1218
1219
1220
1221
1222
1223
1224
1225
1226
1227
1228
1229
1230
1231
1232
1233
1234
1235
1236
1237
1238
1239
1240
1241
1242
1243
1244
1245
1246
1247
1248
1249
1250
1251
1252
1253
1254
1255
1256
1257
1258
1259
1260
1261
1262
1263
1264
1265
1266
1267
1268
1269
1270
1271
1272
1273
1274
1275
1276
1277
1278
1279
1280
1281
1282
1283
1284
1285
1286
1287
1288
1289
1290
1291
1292
1293
1294
1295
1296
1297
1298
1299
1300
1301
1302
1303
1304
1305
1306
1307
1308
1309
1310
1311
1312
1313
1314
1315
1316
1317
1318
1319
1320
1321
1322
1323
1324
1325
1326
1327
1328
1329
1330
1331
1332
1333
1334
1335
1336
1337
1338
1339
1340
1341
1342
1343
1344
1345
1346
1347
1348
1349
1350
1351
1352
1353
1354
1355
1356
1357
1358
1359
1360
1361
1362
1363
1364
1365
1366
1367
1368
1369
1370
1371
1372
1373
1374
1375
1376
1377
1378
1379
1380
1381
1382
1383
1384
1385
1386
1387
1388
1389
1390
1391
1392
1393
1394
1395
1396
1397
1398
1399
1400
1401
1402
1403
1404
1405
1406
1407
1408
1409
1410
1411
1412
1413
1414
1415
1416
1417
1418
1419
1420
1421
1422
1423
1424
1425
1426
1427
1428
1429
1430
1431
1432
1433
1434
1435
1436
1437
1438
1439
1440
1441
1442
1443
1444
1445
1446
1447
1448
1449
1450
1451
1452
1453
1454
1455
1456
1457
1458
1459
1460
1461
1462
1463
1464
1465
1466
1467
1468
1469
1470
1471
1472
1473
1474
1475
1476
1477
1478
1479
1480
1481
1482
1483
1484
1485
1486
1487
1488
1489
1490
1491
1492
1493
1494
1495
1496
1497
1498
1499
1500
1501
1502
1503
1504
1505
1506
1507
1508
1509
1510
1511
1512
1513
1514
1515
1516
1517
1518
1519
1520
1521
1522
1523
1524
1525
1526
1527
1528
1529
1530
1531
1532
1533
1534
1535
1536
1537
1538
1539
1540
1541
1542
1543
1544
1545
1546
1547
1548
1549
1550
1551
1552
1553
1554
1555
1556
1557
1558
1559
1560
1561
1562
1563
1564
1565
1566
1567
1568
1569
1570
1571
1572
1573
1574
1575
1576
1577
1578
1579
1580
1581
1582
1583
1584
1585
1586
1587
1588
1589
1590
1591
1592
1593
1594
1595
1596
1597
1598
1599
1600
1601
1602
1603
1604
1605
1606
1607
1608
1609
1610
1611
1612
1613
1614
1615
1616
1617
1618
1619
1620
1621
1622
1623
1624
1625
1626
1627
1628
1629
1630
1631
1632
1633
1634
1635
1636
1637
1638
1639
1640
1641
1642
1643
1644
1645
1646
1647
1648
1649
1650
1651
1652
1653
1654
1655
1656
1657
1658
1659
1660
1661
1662
1663
1664
1665
1666
1667
1668
1669
1670
1671
1672
1673
1674
1675
1676
1677
1678
1679
1680
1681
1682
1683
1684
1685
1686
1687
1688
1689
1690
1691
1692
1693
1694
1695
1696
1697
1698
1699
1700
1701
1702
1703
1704
1705
1706
1707
1708
1709
1710
1711
1712
1713
1714
1715
1716
1717
1718
1719
1720
1721
1722
1723
1724
1725
1726
1727
1728
1729
1730
1731
1732
1733
1734
1735
1736
1737
1738
1739
1740
1741
1742
1743
1744
1745
1746
1747
1748
1749
1750
1751
1752
1753
1754
1755
1756
1757
1758
1759
1760
1761
1762
1763
1764
1765
1766
1767
1768
1769
1770
1771
1772
1773
1774
1775
1776
1777
1778
1779
1780
1781
1782
1783
1784
1785
1786
1787
1788
1789
1790
1791
1792
1793
1794
1795
1796
1797
1798
1799
1800
1801
1802
1803
1804
1805
1806
1807
1808
1809
1810
1811
1812
1813
1814
1815
1816
1817
1818
1819
1820
1821
1822
1823
1824
1825
1826
1827
1828
1829
1830
1831
1832
1833
1834
1835
1836
1837
1838
1839
1840
1841
1842
1843
1844
1845
1846
1847
1848
1849
1850
1851
1852
1853
1854
1855
1856
1857
1858
1859
1860
1861
1862
1863
1864
1865
1866
1867
1868
1869
1870
1871
1872
1873
1874
1875
1876
1877
1878
1879
1880
1881
1882
1883
1884
1885
1886
1887
1888
1889
1890
1891
1892
1893
1894
1895
1896
1897
1898
1899
1900
1901
1902
1903
1904
1905
1906
1907
1908
1909
1910
1911
1912
1913
1914
1915
1916
1917
1918
1919
1920
1921
1922
1923
1924
1925
1926
1927
1928
1929
1930
1931
1932
1933
1934
1935
1936
1937
1938
1939
1940
1941
1942
1943
1944
1945
1946
1947
1948
1949
1950
1951
1952
1953
1954
1955
1956
1957
1958
1959
1960
1961
1962
1963
1964
1965
1966
1967
1968
1969
1970
1971
1972
1973
1974
1975
1976
1977
1978
1979
1980
1981
1982
1983
1984
1985
1986
1987
1988
1989
1990
1991
1992
1993
1994
1995
1996
1997
1998
1999
2000
2001
2002
2003
2004
2005
2006
2007
2008
2009
2010
2011
2012
2013
2014
2015
2016
2017
2018
2019
2020
2021
2022
2023
2024
2025
2026
2027
2028
2029
2030
2031
2032
2033
@Book{nlpor14,
  Isbn = {978-1-118-56928-3},
  Language = { English },
  Pages = { 304 p. },
  Publisher = {John Wiley \& Sons: Chichester},
  Type = { Book },
  author = {Nash, John C.},
  title = {{Nonlinear Parameter Optimization Using R Tools}},
  month = {May},
  year = {2014},
  url = {http://www.wiley.com//legacy/wileychi/nash/},
  note = {Companion website (see http://www.wiley.com//legacy/wileychi/nash/).
   JNfile: 14nlpor.pdf}
}


@Manual{p-Rmpfr,
    title = {Rmpfr: R MPFR - Multiple Precision Floating-Point Reliable},
    author = {Martin Maechler},
    year = {2013},
    note = {R package version 0.5-3},
    url = {http://CRAN.R-project.org/package=Rmpfr},
  }

@article{TienEarn10,
   author = {J H Tien and D J D Earn},
   year = {2010},
   title = {Multiple transmission pathways and disease dynamics in a waterborne pathogen  model},
   journal = {Bulletin of Mathematical Biology},
   volume = {72},
   number ={6},
   pages ={1506--1533}
}

@Article{grofit10,
    title = {{grofit}: Fitting Biological Growth Curves with {R}},
    author = {Matthias Kahm and Guido Hasenbrink and Hella Lichtenberg-Frat\'{e} and Jost Ludwig and Maik Kschischo},
    journal = {Journal of Statistical Software},
    year = {2010},
    volume = {33},
    number = {7},
    pages = {1--21},
    url = {http://www.jstatsoft.org/v33/i07/}
  }


@article{linbench03,
   title = {The {LINPACK} Benchmark: Past, Present, and Future}, 
   author = {J. J. Dongarra and P. Luszczek and A. Petitet}, 
   journal = {Concurrency and Computation: Practice and Experience},
   volume = {15},
   number = {9},
   pages = {803--820},
   month = {August},
   year = {2003}
}

@Manual{p-nnls,
    title = {{nnls:} The Lawson-Hanson algorithm for non-negative least squares {(NNLS)}},
    author = {Katharine M. Mullen and Ivo H. M. van Stokkum},
    year = {2012},
    note = {R package version 1.4},
    url = {http://CRAN.R-project.org/package=nnls}
}  

@Manual{p-fitdistrplus,
    title = {fitdistrplus: help to fit of a parametric distribution to non-censored or censored data },
    author = {Marie Laure Delignette-Muller and Regis Pouillot and Jean-Baptiste Denis and Christophe Dutang},
    year = {2013},
    note = {R package version 1.0-1}
  }

@Manual{p-nlstools,
    title = {nlstools: tools for nonlinear regression diagnostics},
    author = {Florent Baty and Marie-Laure Delignette-Muller},
    year = {2013},
    note = {R package version 0.0-15},
}

@MISC{Fox-sem,
    author = {John Fox},
    title = {{TEACHER’S CORNER} Structural Equation Modeling With the sem Package in {R}},
    journal = {STRUCTURAL EQUATION MODELING},
    volume =  13,
    numeber = 3, 
    pages = {465–-486}, 
    year = {2006}
}

@Manual{p-gnm,
    title = {Generalized nonlinear models in R: An overview of the gnm package},
    author = {Heather Turner and David Firth},
    year = {2012},
    note = {R package version 1.0-6},
    url = {http://CRAN.R-project.org/package=gnm},
  }


@Manual{p-nlme,
    title = {nlme: Linear and Nonlinear Mixed Effects Models},
    author = {Jose Pinheiro and Douglas Bates and Saikat DebRoy and Deepayan Sarkar and {R Core Team}},
    year = {2013},
    note = {R package version 3.1-111},
  }


@Manual{citeR,
    title = {R: A Language and Environment for Statistical Computing},
    author = {{R Core Team}},
    organization = {R Foundation for Statistical Computing},
    address = {Vienna, Austria},
    year = {2013},
    url = {http://www.R-project.org/}
}

@Manual{p-bbmle,
    title = {bbmle: Tools for general maximum likelihood estimation},
    author = {Ben Bolker and R Development Core Team},
    year = {2013},
    note = {R package version 1.0.13},
    url = {http://CRAN.R-project.org/package=bbmle},
}



@Manual{p-ROI,
    title = {ROI: R Optimization Infrastructure},
    author = {Kurt Hornik and David Meyer and Stefan Theussl},
    year = {2011},
    note = {R package version 0.0-7},
    url = {http://CRAN.R-project.org/package=ROI}
  }

@Manual{p-Rsymphony,
    title = {Rsymphony: Symphony in R},
    author = {Reinhard Harter and Kurt Hornik and Stefan Theussl},
    year = {2013},
    note = {R package version 0.1-16},
    url = {http://CRAN.R-project.org/package=Rsymphony}
  }

@Manual{p-Rglpk,
    title = {Rglpk: R/GNU Linear Programming Kit Interface},
    author = {Stefan Theussl and Kurt Hornik},
    year = {2013},
    note = {R package version 0.5-1},
    url = {http://CRAN.R-project.org/package=Rglpk}
}

@Manual{p-linprog,
    title = {{linprog: Linear Programming / Optimization}},
    author = {Arne Henningsen},
    year = {2012},
    note = {R package version 0.9-2},
    url = {http://CRAN.R-project.org/package=linprog}
}


@Manual{p-lpSolve,
    title = {{lpSolve: Interface to Lp\_solve v. 5.5 to solve linear / integer programs}},
    author = {Michel Berkelaar and {others}},
    year = {2013},
    note = {R package version 5.6.7},
    url = {http://CRAN.R-project.org/package=lpSolve}
}

@Article{p-kernlab,
    title = {kernlab -- An {S4} Package for Kernel Methods in {R}},
    author = {Alexandros Karatzoglou and Alex Smola and Kurt Hornik and Achim Zeileis},
    journal = {Journal of Statistical Software},
    year = {2004},
    volume = {11},
    number = {9},
    pages = {1--20},
    url = {http://www.jstatsoft.org/v11/i09/}
  }


 @Manual{p-quadprog,
    title = {quadprog: Functions to solve Quadratic Programming Problems.},
    author = {S original by Berwin A. Turlach R port by Andreas Weingessel},
    year = {2013},
    note = {R package version 1.5-5},
    url = {http://CRAN.R-project.org/package=quadprog}
  }

@Manual{p-Rsolnp,
    title = {Rsolnp: General
  Non-linear Optimization Using Augmented Lagrange Multiplier Method},
    author = {Alexios Ghalanos and Stefan Theussl},
    year = {2012},
    note = {R package version 1.14},
    url = {http://CRAN.R-project.org/package=Rsolnp}
}

@PhDThesis{Ye1987,
   author = {Yinyu Ye},
   year = {1987},
   title = {Interior Algorithms for Linear, Quadratic, and
  Linearly Constrained Non-Linear Programming},
   note = {Ph. D. Dissertation},
   school = {Department of EES, Stanford University}, 
   address = {Palo Alto, California}
}
 

@Manual{p-alabama,
    title = {alabama: Constrained nonlinear optimization},
    author = {Ravi Varadhan},
    year = {2012},
    note = {R package version 2011.9-1},
    url = {http://CRAN.R-project.org/package=alabama}
}


@Manual{p-adagio,
    title = {adagio: Discrete and Global Optimization Routines},
    author = {Hans Werner Borchers},
    year = {2013},
    note = {R package version 0.5.9},
    url = {http://CRAN.R-project.org/package=adagio}
}


@article{Pachon2009,
author = {Pach\'{o}n, R. and Trefethen, L. N.},
doi = {10.1007/s10543-009-0240-1},
journal = {BIT Numerical Mathematics},
number = {4},
pages = {721--741},
title = {{Barycentric-Remez algorithms for best polynomial approximation in the chebfun system}},
url = {http://www.springerlink.com/index/10.1007/s10543-009-0240-1},
volume = {49},
year = {2009}
}

@Manual{p-sem,
    title = {sem: Structural Equation Models},
    author = {John Fox and Zhenghua Nie and Jarrett Byrnes},
    year = {2013},
    note = {R package version 3.1-301},
    url = {http://CRAN.R-project.org/package=sem}
}


@Article{p-systemfit,
    title = {systemfit: A Package for Estimating Systems of Simultaneous Equations in R},
    author = {Arne Henningsen and Jeff D. Hamann},
    journal = {Journal of Statistical Software},
    year = {2007},
    volume = {23},
    number = {4},
    pages = {1--40},
    url = {http://www.jstatsoft.org/v23/i04/}
 }

@Manual{p-nleqslv,
    title = {nleqslv: Solve systems of non linear equations},
    author = {Berend Hasselman},
    year = {2013},
    note = {R package version 2.0},
    url = {http://CRAN.R-project.org/package=nleqslv},
}

@Article{p-GA,
    title = {{GA}: A Package for Genetic Algorithms in {R}},
    author = {Luca Scrucca},
    journal = {Journal of Statistical Software},
    year = {2013},
    volume = {53},
    number = {4},
    pages = {1--37},
    url = {http://www.jstatsoft.org/v53/i04/}
}


@article {BUGS09,
author = {Lunn, David and Spiegelhalter, David and Thomas, Andrew and Best, Nicky},
title = {The BUGS project: Evolution, critique and future directions},
journal = {Statistics in Medicine},
volume = {28},
number = {25},
publisher = {John Wiley & Sons, Ltd.},
pages = {3049--3067},
year = {2009}
}

@Manual{p-R2admb,
    title = {R2admb: ADMB to R interface functions},
    author = {Ben Bolker and Hans Skaug and Jeff Laake},
    year = {2013},
    note = {R package version 0.7.10},
    url = {http://CRAN.R-project.org/package=R2admb},
}


@Manual{p-PBSadmb,
    title = {PBSadmb: ADMB for R Using Scripts or GUI},
    author = {Jon T. Schnute and Rowan Haigh and Alex Couture-Beil},
    year = {2013},
    note = {R package version 0.66.87},
    url = {http://CRAN.R-project.org/package=PBSadmb},
}


@Misc{R-extns,
  author        = {{\R\ Core Team}},
  title         = {{Writing \R\ Extensions}},
  year          = {2013},
  url           = {http://CRAN.R-project.org/doc/manuals/R-exts.html}
}

  @Manual{p-gaoptim,
    title = {gaoptim: Genetic Algorithm optimization for real-based and
permutation-based problems},
    author = {Fernando Tenorio},
    year = {2013},
    note = {R package version 1.1},
    url = {http://CRAN.R-project.org/package=gaoptim}
  }

@Manual{p-trustOptim,
    title = {trustOptim: Trust region nonlinear optimization, efficient for sparse
          Hessians},
    author = {Michael Braun},
    year = {2013},
    note = {R package version 0.8.1},
    url = {http://CRAN.R-project.org/package=trustOptim}
}


@Misc{NLoptSJ,
   author= {Steven G. Johnson},
   title = {{The NLopt nonlinear-optimization package}},
   url   = {http://ab-initio.mit.edu/nlopt},
   year  = 2008
}


@Manual{p-trust,
    title = {trust: Trust Region Optimization},
    author = {Charles J. Geyer},
    year = {2013},
    note = {R package version 0.1-4},
    url = {http://CRAN.R-project.org/package=trust}
}



@Manual{p-nloptwrap,
    title = {nloptwrap: Wrapper for Package nloptr},
    author = {Hans W Borchers},
    year = {2013},
    note = {R package version 0.5-1},
    url = {http://CRAN.R-project.org/package=nloptwrap}
}


@Manual{p-nloptr,
    title = {nloptr: \R\ interface to {NLopt}},
    author = {Jelmer Ypma},
    year = {2013},
    note = {R package version 0.9.3},
    url = {http://CRAN.R-project.org/package=nloptr}
}


  @Manual{p-ucminf,
    title = {ucminf: General-purpose unconstrained non-linear optimization},
    author = {Hans Bruun Nielsen and Stig Bousgaard Mortensen},
    year = {2012},
    note = {R package version 1.1-3},
    url = {http://CRAN.R-project.org/package=ucminf}
 }


@Article{JNRV11,
    title = {Unifying Optimization Algorithms to Aid Software System Users: {optimx} for {R}},
    author = {John C. Nash and Ravi Varadhan},
    journal = {Journal of Statistical Software},
    year = {2011},
    volume = {43},
    number = {9},
    pages = {1--14},
    url = {http://www.jstatsoft.org/v43/i09/}
}


@article{moler2003ndw,
  author = {Moler, Cleve and Loan, Charles Van},
  journal = {SIAM Review},
  number = 1,
  pages = {3-49},
  publisher = {SIAM},
  title = {Nineteen Dubious Ways to Compute the Exponential of a Matrix, Twenty-Five Years Later},
  volume = 45,
  year = 2003
}


@Manual{microbench13,
    title = {microbenchmark: Sub microsecond accurate timing functions.},
    author = {Olaf Mersmann},
    year = {2013},
    note = {R package version 1.3-0},
    url = {http://CRAN.R-project.org/package=microbenchmark},
}

@Manual{rbenchmark12,
    title = {rbenchmark: Benchmarking routine for R},
    author = {Wacek Kusnierczyk},
    year = {2012},
    note = {R package version 1.0.0},
    url = {http://CRAN.R-project.org/package=rbenchmark},
}

@book{AIMMS06,
    author = {Bisschop, Johannes and Roelofs, Marcel},
    isbn = {1847539122},
    publisher = {Paragon Decision Technology},
    title = {{AIMMS optimization modeling}},
    year = {2006}
}


@article{koe87as229,
  author = {Koenker, Roger W. and D'Orey, Vasco},
  title = {Algorithm AS 229: Computing regression quantiles},
  journal = {Applied Statistics},
  year = {1987},
  volume = {36},
  pages = {383-393}
}

@book{Koenker2005,
author = {Koenker, R.},
title= {Quantile regression},
year = {2005},
doi = {10.1017/CBO9780511754098},
address = {Cambridge},
publisher = {Cambridge University Press}
}

@Manual{quantreg13,
    title = {quantreg: Quantile Regression},
    author = {Roger Koenker},
    year = {2013},
    note = {R package version 5.05},
    url = {http://CRAN.R-project.org/package=quantreg}
}


@InProceedings{ McCarthy88,
  author = "William F. McCarthy and David V. Bateman",
  title =  {The use of mathematical programming for designing dual
            frame surveys},
  booktitle = {Proceedings of the Survey Research Methods Section, 1988},
  publisher = {American Statistical Association, Alexandria, VA},
  pages = "652--653",
  year =  "1988"
}

@PhDThesis{ Bhat2011,
   author = {Bhat, K. A.},
   year = {2011},
   title = {Some aspects of mathematical programming in statistics},
   note = {Ph. D. Dissertation},
   school = {Post Graduate Deptartment of Statistics, Univ. of Kashmir}, 
   address = {Srinagar, India}
}

@article {Kovalchik12,
author = {Kovalchik, Stephanie A. and Varadhan, Ravi and Fetterman, Barbara and Poitras, Nancy E. and Wacholder, Sholom and Katki, Hormuzd A.},
title = {A general binomial regression model to estimate standardized risk differences from binary response data},
journal = {Statistics in Medicine},
volume = {32},
number = {5},
publisher = {John Wiley & Sons, Ltd},
pages = {808--821},
year = {2013}
}
kn


@article{Feldman91,
 author = {Feldman, S. I. and Gay, D. M. and Maimone, M. W. and Schryer, N. L.},
 title = {Availability of f2c - a Fortran to C converter},
 journal = {SIGPLAN Fortran Forum},
 issue_date = {July 1991},
 volume = {10},
 number = {2},
 month = jul,
 year = {1991},
 pages = {14--15},
 numpages = {2},
 publisher = {ACM},
 address = {New York, NY, USA}
} 

@Manual{ Molga2005,
   author = { Molga, M. and Smutnicki, C. },
   title  = { Test functions for optimization needs},
   year   = {2005},
   url    = {http://www.zsd.ict.pwr.wroc.pl/files/docs/functions.pdf}
}

@ARTICLE{TZ89,
  author =       {A. T\"{o}rn and A. Zilinskas},
  title =        "{Global Optimization}",
  journal =      "{Lecture Notes in Computer Science}",
  publisher =    "{Springer-Verlag}",
  year =         {1989},
  volume =       {350},
  address = {New York, NY, USA}
}

@ARTICLE{MSB91,
  author =       {H. M\"{u}hlenbein and D. Schomisch and J. Born},
  title =        "{The Parallel Genetic Algorithm as Function Optimizer}",
  journal =      "{Parallel Computing}",
  year =         {1991},
  volume =      {17},
  number =       {6-7},
  pages =        {619-632},
}

@Manual{p-likelihood,
  title = {likelihood: Methods for maximum likelihood estimation},
  author = {Lora Murphy},
  year = {2012},
  note = {R package version 1.5},
  url = {http://CRAN.R-project.org/package=likelihood},
}


@Manual{LMurphy12,
  title = {likelihood: Methods for maximum likelihood estimation},
  author = {Lora Murphy},
  year = {2012},
  note = {R package version 1.5},
  url = {http://CRAN.R-project.org/package=likelihood},
}



@Article{ GenSA13,
  author       = { Yang Xiang and Sylvain Gubian and Brian Suomela and Julia Hoeng },
  title        = { Generalized Simulated Annealing for Global Optimization: the GenSA Package for R },
  journal      = { The R Journal },
  year         = { 2013 },
  volume       = { 5 },
  number       = { 1 },
  pages        = { 13--29 },
  month        = jun,
  url          = { http://journal.r-project.org/archive/2013-1/xiang-gubian-suomela-etal.pdf }
}


@Article{Grassmann12,
  title = {{GrassmannOptim}: An {R} Package for Grassmann Manifold Optimization},
  author = {Kofi P. Adragni and R. Dennis Cook and Seongho Wu},
  journal = {Journal of Statistical Software},
  year = {2012},
  volume = {50},
  number = {5},
  pages = {1--18},
  url = {http://www.jstatsoft.org/v50/i05/},
}


@Manual{Rmalschains12,
  title = {Continuous Optimization using Memetic Algorithms with Local Search Chains (MA-LS-Chains) in R},
  author = {Christoph Bergmeir and Daniel Molina and Jos\'e M. Ben\'itez},
  year = {2012},
  note = {R package version 0.1},
}


@Manual{DEoptim13,
  title = {{DEoptim}: Differential Evolution in {R}},
  author = {David Ardia and Katharine M. Mullen and Brian G. Peterson and Joshua Ulrich},
  year = {2013},
  note = {version 2.2-2},
  url = {http://CRAN.R-project.org/package=DEoptim},
}

@Article{DEoptimJSS11,
  title = {{DEoptim}: An {R} Package for Global Optimization by Differential Evolution},
  author = {Katharine Mullen and David Ardia and David Gil and Donald Windover and James Cline},
  journal = {Journal of Statistical Software},
  year = {2011},
  volume = {40},
  number = {6},
  pages = {1--26},
  url = {http://www.jstatsoft.org/v40/i06/},
}

@Article{DEoptimRjournal11,
  title = {{D}ifferential {E}volution with {DEoptim}: An Application to Non-Convex Portfolio Optimization},
  author = {David Ardia and Kris Boudt and Peter Carl and Katharine M. Mullen and Brian G. Peterson},
  journal = {The R Journal},
  year = {2011},
  volume = {3},
  number = {1},
  pages = {27--34},
  url = {http://journal.r-project.org/archive/2011-1/2011-1\_index.html},
}

@Article{DEoptimWilmott11,
  title = {{J}ump-Diffusion Calibration using {D}ifferential {E}volution},
  author = {David Ardia and Juan Ospina Arango and Norman Giraldo Gomez},
  journal = {Wilmott Magazine},
  year = {2011},
  volume = {55},
  pages = {76--79},
  url = {http://www.wilmott.com/},
}

@Book{DEbook6,
  title = {{D}ifferential {E}volution - A Practical Approach to Global Optimization},
  author = {Kenneth V. Price and Rainer M. Storn and Jouni A. Lampinen},
  publisher = {Springer-Verlag},
  series = {Natural Computing},
  month = {January},
  year = {2006},
  note = {ISBN 540209506},
}

@Manual{RcppDE12,
  title = {RcppDE: Global optimization by differential evolution in C++},
  author = {Dirk Eddelbuettel},
  year = {2012},
  note = {R package version 0.1.1. Extends DEoptim which itself is based on DE-Engine (by Rainer Storn)},
  url = {http://CRAN.R-project.org/package=RcppDE},
}

@Manual{smco12,
  title = {smco: A simple Monte Carlo optimizer using adaptive coordinate
sampling},
  author = {Prof. Juan David Velasquez H. Universidad Nacional de Colombia},
  year = {2012},
  note = {R package version 0.1},
  url = {http://CRAN.R-project.org/package=smco},
}

@Manual{soma11,
  title = {soma: General-purpose optimisation with the Self-Organising Migrating
Algorithm},
  author = {Jon Clayden; based on the work of Ivan Zelinka},
  year = {2011},
  note = {R package version 1.1.0},
  url = {http://CRAN.R-project.org/package=soma},
}



@Article{rgenoud11,
  title = {Genetic Optimization Using Derivatives:  The {rgenoud} Package for {R}},
  author = {Walter R. {Mebane, Jr.} and Jasjeet S. Sekhon},
  journal = {Journal of Statistical Software},
  year = {2011},
  volume = {42},
  number = {11},
  pages = {1--26},
  url = {http://www.jstatsoft.org/v42/i11/},
}

@Article{rgenoudpolitical,
  title = {Genetic Optimization Using Derivatives: Theory and Application to Nonlinear Models},
  author = {Jasjeet S. Sekhon and Walter R. {Mebane, Jr.}},
  journal = {Political Analysis},
  year = {1998},
  volume = {7},
  pages = {189--213},
}

@book{mccullagh1989generalized,
  title={Generalized Linear Models, Second Edition},
  author={McCullagh, P. and Nelder, J.A.},
  isbn={9780412317606},
  lccn={99013896},
  series={Monographs on statistics and applied probability},
  url={http://books.google.ca/books?id=h9kFH2\_FfBkC},
  year={1989},
  publisher={Chapman and Hall}
}


@article{Toomet2008,
  author =	"Ott Toomet and Arne Henningsen",
  title =	"Sample Selection Models in R: Package sampleSelection",
  journal =	"Journal of Statistical Software",
  volume =	"27",
  number =	"7",
  pages =	"1--23",
  day =  	"29",
  month =	"7",
  year = 	"2008"
}

@Manual{p-pracma,
    title = {pracma: Practical Numerical Math Functions},
    author = {Hans W Borchers},
    year = {2013},
    note = {R package version 1.5.0},
    url = {http://CRAN.R-project.org/package=pracma},
  }


@article{Lyness1971,
 author = {Lyness, J. N. and Sande, G.},
 title = {Algorithm 413: ENTCAF and ENTCRE: evaluation of normalized Taylor coefficients of an analytic function},
 journal = {Communications of the ACM},
 issue_date = {Oct. 1971},
 volume = {14},
 number = {10},
 month = oct,
 year = {1971},
 pages = {669--675}
} 



@article{martins03,
  author = {Martins, Joaquim R. R. A. and Sturdza, Peter and Alonso, Juan J.},
  journal = {ACM Transactions on Mathematical Software},
  number = 3,
  pages = {245--262},
  timestamp = {2010-11-14T22:23:38.000+0100},
  title = {The complex-step derivative approximation},
  url = {http://dx.doi.org/10.1145/838250.838251},
  volume = 29,
  year = 2003
}


@article{Squire98,
 author = {Squire, William and Trapp, George},
 title = {Using Complex Variables to Estimate Derivatives  of Real Functions},
 journal = {SIAM Review},
 issue_date = {March 1998},
 volume = {40},
 number = {1},
 month = mar,
 year = {1998},
 pages = {110--112}
} 

@article{OlearyRust13,
year={2013},
issn={0926-6003},
journal={Computational Optimization and Applications},
volume={54},
number={3},
title={Variable projection for nonlinear least squares problems},
publisher={Springer US},
author={O'Leary, Dianne P. and Rust, Bert W.},
pages={579-593}
}

@InProceedings{GolubLeveque79,
  author =       "Gene H. Golub and Randall J. LeVeque",
  title =        "Extensions and Uses of the Variable Projection
                 Algorithm for Solving Nonlinear Least Squares
                 Problems",
  booktitle = {Proceedings of the Army Numerical Analysis and Computing Conference},
  pages =        "1--12",
  year =         "1979"
}

@Book{Lanczos1956,
  author =       "Cornelius Lanczos",
  title =        "Applied Analysis",
  publisher =    {Prentice-Hall},
  address =      {Englewood Cliffs, NJ},
  pages =        "xx + 539",
  year =         "1956",
  note =         "Reprinted by Dover, New York,
                 1988."
}

@book{Pereyra10,
      author       = "Pereyra, Victor and Scherer, Godela",
      title        = "Exponential Data Fitting and its Applications",
      publisher    = "Bentham Science Publishers",
      address      = "Sharjah",
      year         = "2010",
}

@Article{GolubPereyra73,
  author =       "G. H. Golub and V. Pereyra",
  title =        "The Differentiation of Pseudo-Inverses and Nonlinear
                 Least Squares Problems Whose Variables Separate",
  journal =      {SIAM Journal of Numerical Analysis},
  volume =       "10",
  number =       "2",
  pages =        "413--432",
  month =        apr,
  year =         "1973"
}

@article{Mullen2007,
 author = {Mullen, Katharine M. and Vengris, Mikas and Stokkum, Ivo H.},
 title = {Algorithms for separable nonlinear least squares with application to modelling time-resolved spectra},
 journal = {J. of Global Optimization},
 issue_date = {June      2007},
 volume = {38},
 number = {2},
 month = jun,
 year = {2007},
 issn = {0925-5001},
 pages = {201--213},
 numpages = {13}
} 

@InProceedings{    jnkp79tsl,
  publisher  = {University of Waterloo, Ontario, Canada},
  month    = {May},
  booktitle  = {Proceedings of Computer Science and Statistics: 
               12th annual Symposium on the Interface : May 10 \& 11, 1979, University of Waterloo, 
               Waterloo, Ontario, Canada,
               Jane Gentleman (ed.)},
  author  = {Nash, John C. and Kevin Price},
  title    = {Fitting two straight lines},
  pages    = { 363--367 },
  note = {JNFile: 78Fitting2StraightLines.pdf. Page numbers may be in error. 
	  Also Engineering and Statistical Research Institute, Agriculture
               Canada, Contribution No. I-99, 1978},
  year    = {1979}
}


@book {Ross90,
    author       = {Ross, Gavin J.S.},
    title        = {Nonlinear estimation.},
    year         = {1990},
    isbn         = {3-540-97278-1},
    pages        = {viii, 189 p.},
    publisher    = {New York etc.: Springer-Verlag},
}

@book{Seber89Wild,
    address = {New York},
    author = {Seber, G. A. F. and Wild, C. J.},
    publisher = {Wiley},
    title = {{Nonlinear regression}},
    year = {1989}
}

@Book{RitzStreibig2008,
    title = {Nonlinear Regression with R},
    author = {C. Ritz and J. C. Streibig},
    address = {New York},
    publisher = {Springer},
    year = {2008},
}

@inbook{SGN83,
author = {Stephen G. Nash},
chapter = {Truncated-Newton Methods for Large-Scale Minimization},
booktitle = {Applications of Nonlinear Programming to Optimization and Control},
editor = {H. E. Rauch},
pages = {91--100}
}

@book{Rauch83,
editor = {H. E. Rauch},
title = {Applications of Nonlinear Programming to Optimization and Control},
booktitle = {Applications of Nonlinear Programming to Optimization and Control},
publisher = {Pergamon Press},
year = {1983},
address = {Oxford}
}

ls @Article{Barzilai88,
  author =       "Jonathan Barzilai and Jonathan M. Borwein",
  title =        "Two-point step size gradient methods",
  volume =       "8",
  number =       "1",
  pages =        "141--148",
  year =         "1988",
  journal =     "IMA Journal of Numerical Analysis"
}


@Article{Cruz06spectralresidual,
    author = {William La Cruz and José Mario Martínez and Marcos Raydan},
    title = {Spectral residual method without gradient information for solving large-scale nonlinear systems: Theory and experiments},
    journal = {Mathematics of Computation},
    volume = {75},
    pages = {1429--1448},
    year = {2006}
}

@TECHREPORT{Cruz04spectralresidual,
    author = {William La Cruz and José Mario Martínez and Marcos Raydan},
    title = {Spectral residual method without gradient information for solving large-scale nonlinear systems: Theory and experiments},
    institution = {unknown},
    year = {2004}
}

@book{HansenWalster2004,
  title = {Global Optimization Using Interval Analysis},
  author = {E. R. Hansen and G. W. Walster}, 
  publisher = {MIT Press},
  address = {Cambridge, Massachusetts}, 
  year = 2004
}


@article{WatsonHompack97,
 author = {Watson, Layne T. and Sosonkina, Maria and Melville, Robert C. and Morgan, Alexander P. and Walker, Homer F.},
 title = {Algorithm 777: HOMPACK90: a suite of Fortran 90 codes for globally convergent homotopy algorithms},
 journal = {ACM Trans. Math. Softw.},
 issue_date = {Dec. 1997},
 volume = {23},
 number = {4},
 month = dec,
 year = {1997},
 issn = {0098-3500},
 pages = {514--549},
 numpages = {36},
 publisher = {ACM},
 address = {New York, NY, USA}
} 


@book{holland75,
    address = {Ann Arbor, MI, USA},
    author = {Holland, J. H.},
    publisher = {University of Michigan Press},
    title = {{Adaptation in Natural and Artificial Systems}},
    year = {1975}
}

@INPROCEEDINGS{Kennedy95PSO, 
  author={Kennedy, J. and Eberhart, R.}, 
  booktitle={Neural Networks, 1995. Proceedings., IEEE International Conference on},
  title={Particle swarm optimization}, 
  year={1995}, 
  volume={4}, 
  pages={1942-1948}
}

@InProceedings{ Geyer91,
    author = {C. J. Geyer},
    title = {Markov chain Monte Carlo maximum likelihood},
    booktitle = {{Computing Science and Statistics, Proceedings of the 23rd Symposium on the Interface}},
    publisher = {American Statistical Association, New York},
    year = {1991},
    pages = {n.a.}
}

@Article{ Swendsen86,
    author = {Swendsen RH and Wang JS},
    title = {Replica Monte Carlo simulation of spin glasses},
    journal = { Physical Review Letters},
    year = {1986},
    volume = {57},
    pages = {2607--2609}
}

@article{Wenzel99,
  title = {Stochastic Tunneling Approach for Global Minimization of Complex Potential Energy Landscapes},
  author = {Wenzel, W. and Hamacher, K.},
  journal = {Phys. Rev. Lett.},
  volume = {82},
  issue = {15},
  pages = {3003--3007},
  year = {1999},
  month = {Apr},
  doi = {10.1103/PhysRevLett.82.3003},
  url = {http://link.aps.org/doi/10.1103/PhysRevLett.82.3003},
  publisher = {American Physical Society}
}

@Article{ Bremmerman70,
    author = {Hans Bremmerman},
    title = {A method for unconstrained global optimization},
    journal = {Math. Biosci.},
    year = {1970},
    volume = {9},
    pages = {1--15}
}


@Article{ Glover89,
    author = {Fred Glover},
    title = {Tabu Search - Part 1},
    journal = {ORSA Journal on Computing},
    year = {1989},
    volume = {1},
    number = {2},
    pages = {190--206}
}


@Article{ Kirkpatrick83,
    author = {S. Kirkpatrick and C. D. Gelatt Jr. and M. P. Vecchi},
    title = {Optimization by Simulated Annealing},
    journal = {Science},
    year = {1983},
    month = {May},
    volume = {220},
    number = {4598},
    pages = {671--680}
}

@ARTICLE{Boer02atutorial,
    author = {P. T. De Boer and D.P. Kroese and S. Mannor and R.Y. Rubinstein},
    title = {A Tutorial on the Cross-Entropy Method},
    journal = {Annals of Operations Research},
    year = {2002},
    volume = {134}
}

@InProceedings{Rajnarayan2006,
author = {Rajnarayan, D. and Wolpert, D.H. and Kroo, I.},
title = {Optimization Under Uncertainty Using Probability Collectives},
booktitle = {{Proceedings of 11th AIAA/ISSMO Multidisciplinary Analysis and Optimization Conference, Portsmouth, VA}}, year = {2006},
note = {{AIAA-2006-7033}} 
}

@article{Kulkarni2011PCA,
 author = {Kulkarni, Anand J. and Tai, K.},
 title = {A probability collectives approach with a feasibility-based rule for constrained optimization},
 journal = {Appl. Comp. Intell. Soft Comput.},
 issue_date = {January 2011},
 volume = {2011},
 month = jan,
 year = {2011},
 issn = {1687-9724},
 pages = {12:12--12:12},
 articleno = {12},
 numpages = {1},
 url = {http://dx.doi.org/10.1155/2011/980216},
 doi = {10.1155/2011/980216},
 acmid = {2208425},
 publisher = {Hindawi Publishing Corp.},
 address = {New York, NY, United States}
} 


@InProceedings{ KuhnTucker51,
  author = {Kuhn, H. W. and Tucker, A. W.},
  year = {1951},
  title = {Nonlinear programming}, 
  booktitle = {{Proceedings of 2nd Berkeley Symposium}},
  institution = {{University of California Press}},
  address = {{Berkeley, USA}},
  pages = {481 -– 492}
}

@MastersThesis{ Karush39,
   author = {W. Karush},
   year = {1939},
   title = {Minima of Functions of Several Variables with Inequalities as Side Constraints},
   note = {M.Sc. Dissertation},
   school = {Dept. of Mathematics, Univ. of Chicago}, 
   address = {Chicago, Illinois}
}

@article{ jnsign12,
  author  = {Nash, John C.},
  title = {{Letter: Weigh less in tonnes?}},
  journal = {Significance},
  year = {2012},
  volume = {9},
  number = {6},
  month = {December},
  pages = {45},
  institution = {{Royal Statistical Society}}
}


@article{Morales2011,
 author = {Morales, Jos{\'e} Luis and Nocedal, Jorge},
 title = {Remark on {Algorithm 778: L-BFGS-B: Fortran subroutines for large-scale bound constrained optimization}},
 journal = {ACM Trans. Math. Softw.},
 issue_date = {November 2011},
 volume = {38},
 number = {1},
 month = {Dec},
 year = {2011},
 pages = {7:1--7:4},
 articleno = {7},
 numpages = {4},
 url = {http://doi.acm.org/10.1145/2049662.2049669},
 publisher = {ACM},
 address = {New York, NY, USA}
} 


@Article{    nash2000toptenDantzig,
  address  = {Piscataway, NJ, USA},
  month    = {January},
  publisher  = {IEEE Educational Activities Department},
  author  = {Nash, John C.},
  title    = {The {Dantzig} Simplex Method for Linear Programming},
  journal  = {Computing in Science and Engineering},
  volume  = {2},
  number  = {1},
  pages    = {29-31},
  year    = {2000}
}

@article{NashTN2000,
   author = {Stephen G. Nash},
   title  = {A survey of truncated-{Newton} methods},
   journal = {Journal of Computational and Applied Mathematics},
   volume = {124},
   year = {2000},
   pages = {45--59}
}

@article{Hartley61,
  author = {Hartley, H. O.},
  year = {1961}, 
  title = {The Modified Gauss-Newton Method for the Fitting of Non-linear Regression Functions by Least Squares},
  journal = {Technometrics},
  volume = {3},
  pages = {269-–280}
}

@article{Levenberg44,
  author = {Kenneth Levenberg},
  year = {1944},
  title = {A Method for the Solution of Certain Non-Linear Problems in Least Squares},
  journal = {Quarterly of Applied Mathematics},
  volume = {2},
  pages = {164-–168}
}

@article{Jones70,
  author = {Jones, A},
  title  = {Spiral -- a new algorithm for non-linear parameter estimation using least squares},
  year   = {1970},
  journal = {Computer Journal},
  volume  = {13},
  number  = {3},
  pages   = {301--308}
}  
  


@article{Marq63,
    author = {Marquardt, Donald W.},
    journal = {SIAM Journal on Applied Mathematics},
    number = {2},
    pages = {431--441},
    publisher = {SIAM},
    title = {{An Algorithm for Least-Squares Estimation of Nonlinear Parameters}},
    volume = {11},
    year = {1963}
}


@article{ Hooke61,
  author    = {Robert Hooke and
               T. A. Jeeves},
  title     = {``Direct Search'' Solution of Numerical and Statistical
               Problems},
  journal   = {J. ACM},
  volume    = {8},
  number    = {2},
  year      = {1961},
  pages     = {212-229},
  ee        = {http://doi.acm.org/10.1145/321062.321069},
  bibsource = {DBLP, http://dblp.uni-trier.de}
}


@Book{VenRip1994,
  author =       {William N. Venables and Brian D. Ripley},
  title =        {Modern Applied Statistics with {S-PLUS}},
  publisher =    {Springer-Verlag},
  address =      {Berlin, Germany~/ London, UK},
  pages =        {xii + 462},
  year =         {1994}
}


@TechReport{more80,
    author = {Mor\'{e}, J. J. and Garbow, B. S. and Hillstrom, K. E.},
    institution = {Argonne National Laboratory},
    keywords = {algorithm, fittiookeng, optimization},
    title = {{ANL-80-74}, {User Guide for MINPACK-1}},
    url = {http://www.mcs.anl.gov/\~{}more/ANL8074a.pdf},
    year = {1980}
}


@Manual{ minpacklm12,
    title = {minpack.lm: R interface to the Levenberg-Marquardt nonlinear least-squares
algorithm found in MINPACK, plus support for bounds},
    author = {Timur V. Elzhov and Katharine M. Mullen and Andrej-Nikolai Spiess and Ben Bolker},
    organization = {R Project for Statistical Computing},
    year = {2012},
    note = {R package version 1.1-6},
    url = {http://CRAN.R-project.org/package=minpack.lm},
  }



@ARTICLE {Belisle92,
        AUTHOR="C. J. P. Belisle",
        TITLE="Convergence Theorems for a Class of Simulated Annealing
               Algorithms on {$\R^d$}",
        JOURNAL={Annals of Applied Probability},
        VOLUME={29},
        YEAR={1992},
        PAGES={885--895}  
}

@Article{Birgin2000,
  author =       "Ernesto G. Birgin and Jos{\'e} Mario Mart{\'\i}nez and
                 Marcos Raydan",
  title =        "Nonmonotone Spectral Projected Gradient Methods on
                 Convex Sets",
  journal =      {SIAM J Optimization},
  volume =       "10",
  number =       "4",
  pages =        "1196--1211",
  month =        {June--July},
  year =         {2000},
  url = {http://epubs.siam.org/sam-bin/dbq/article/33096}
}


@Article{Byrd95,
  author =       "Richard H. Byrd and Peihuang Lu and Jorge Nocedal and Ci You Zhu",
  title =        "A Limited Memory Algorithm for Bound Constrained Optimization",
  journal =      {SIAM Journal on Scientific Computing},
  volume =       "16",
  number =       "5",
  pages =        "1190--1208",
  month =        sep,
  year =         "1995",
  CODEN =        "SJOCE3",
  ISSN =         "1064-8275 (print), 1095-7197 (electronic)",
  MRclass =      "90C30 (65K05)",
  MRnumber =     "96e:90039",
  MRreviewer =   "Henry Wolkowicz",
  bibdate =      "Fri Dec 4 16:17:35 MST 1998",
  acknowledgement = ack-nhfb,
}

@book{Conn09,
author = {A. R. Conn and K. Scheinberg and L.N.Vicente},
year={2009},
title={Introduction to Derivative-Free Optimization},
address = {Philadelphia},
publisher={SIAM}
} 

@ARTICLE{Dai99,
    author = {Y. H. Dai and Y. Yuan},
    title = {A Nonlinear Conjugate Gradient Method with a Strong Global Convergence Property},
    journal = {SIAM Journal on Optimization},
    year = {1999},
    volume = {10},
    pages = {177--182}
}

@inproceedings{Deng06,
 author = {Deng, Geng and Ferris, Michael C.},
 title = {{Adaptation of the UOBYQA Algorithm for Noisy Functions}},
 booktitle = {{WSC '06: Proceedings of the 38th Winter Simulation Conference}},
 year = {2006},
 isbn = {1-4244-0501-7},
 pages = {312--319},
 address = {Monterey, California},
 publisher = {Winter Simulation Conference},
 }

@article{Domini02,
  author    = {F. Dominici},
  title     = {On the Use of Generalized Additive Models in Time-Series 
               Studies of Air Pollution and Health.},
  journal   = {American Journal of Epidemiology},
  volume    = {156},
  number    = {3},
  year      = {2002},
  pages     = {193-202},
}

@Article{Dugg84,
AUTHOR = {Duggleby, R G},
TITLE = {Regression Analysis of Nonlinear {Arrhenius} Plots: An Empirical Model and 
         a Computer Program.},
JOURNAL = {Computers in Biology and Medicine},
VOLUME = {14},
YEAR = {1984},
NUMBER = {4},
PAGES = {447-55}
}


@article{Fletcher70,
  author    = {R. Fletcher},
  title     = {A New Approach to Variable Metric Algorithms},
  journal   = {Computer Journal},
  volume    = {13},
  number    = {3},
  year      = {1970},
  pages     = {317-322},
  bibsource = {DBLP, http://dblp.uni-trier.de}
}

@MISC{PORTlib,
   author = {Phyllis Fox},
   title = {The {Port Mathematical Subroutine Library}, Version 3},
   publisher = {AT\&T Bell Laboratories},
   address = {Murray Hill, NJ},
   url = {http://www.bell-labs.com/project/PORT/},
   year = 1997
   }

@MISC{Gil93,
author = {Dave Gillespie},
year = 1993,
title = {p2c},
publisher = {Free Software Foundation}, 
address = {Boston, MA},
url = {http://directory.fsf.org/project/p2c/}
}


@article{Hager06a,
 author = {William W. Hager and Hongchao Zhang},
 title = {A Survey of Nonlinear Conjugate Gradient Methods},
 journal = {Pacific Journal of Optimization},
 volume = {2},
 year = {2006},
 pages = {35--58},
 }

@article{Hager06b,
 author = {William W. Hager and Hongchao Zhang},
 title = {{Algorithm 851: CG DESCENT}, a Conjugate Gradient Method with Guaranteed Descent},
 journal = {ACM Transactions on Mathematical Software},
 volume = {32},
 number = {1},
 year = {2006},
 pages = {113--137},
 publisher = {ACM},
 address = {New York, NY, USA},
 }

@Book{Huet1996,
  author =       "S. (Sylvie) Huet and others",
  title =        "Statistical tools for nonlinear regression: a
                 practical guide with {S-PLUS} examples",
  publisher =    "Springer-Verlag",
  address =      "Berlin \& New York",
  pages =        "ix + 154",
  year =         "1996",
  ISBN =         "0-387-94727-2",
  ISBN-13 =      "978-0-387-94727-3",
  LCCN =         "QA278.2.S73 1996",
  bibdate =      "Tue Sep 22 08:25:09 MDT 1998",
  series =       "Springer series in statistics",
  acknowledgement = ack-nhfb,
  keywords =     "Regression analysis; Nonlinear theories; Parameter
                 estimation."
}


@article{jnrv2011JSSOBKv43i09,
  author =  "John C. Nash and Ravi Varadhan",
  title =  "Unifying Optimization Algorithms to Aid Software System Users: optimx for {R}",
  journal =  "Journal of Statistical Software",
  volume =  "43",
  number =  "9",
  pages = {1--14},
  day =    "24",
  month =  "8",
  year =   "2011",
  CODEN =  "JSSOBK",
  ISSN =   "1548-7660",
  bibdate =  "2011-08-05",
  URL =    "http://www.jstatsoft.org/v43/i09",
  accepted =  "2011-08-05",
  acknowledgement = "",
  keywords =  "",
  submitted =  "2010-08-12",
}

@article{JoeNash,
 author = {Joe, Harry and Nash, John C.},
 title = {Numerical Optimization and Surface Estimation with Imprecise Function Evaluations},
 journal = {Statistics and Computing},
 volume = {13},
 number = {3},
 year = {2003},
 issn = {0960-3174},
 pages = {277--286},
 doi = {http://dx.doi.org/10.1023/A:1024226918553},
 publisher = {Kluwer Academic Publishers},
 address = {Hingham, MA, USA},
 }

@ARTICLE{Joh03,
    author = {H. Johannesen and J. Aamand},
    title = {Mineralization of Aged Atrazine, Terbuthylazine, 2,4-D, and Mecoprop 
             in Soil and Aquifer Sediment},
    journal = {Environmental Toxicology and Chemistry},
    year = {2003},
    volume = {22},
    pages = {722--729}
}

@book{ kelley1987iterative,
  title={Iterative Methods for Optimization},
  author={Kelley, C.T.},
  isbn={9780898714333},
  lccn={lc99011141},
  series={Frontiers in Applied Mathematics},
  url={http://books.google.ca/books?id=Bq6VcmzOe1IC},
  year={1987},
  publisher={Society for Industrial and Applied Mathematics}
}

@ARTICLE{Kelley97,
    author = {C. T. Kelley},
    title = {Detection and Remediation of Stagnation in the Nelder-Mead Algorithm Using a Sufficient Decrease Condition},
    journal = {SIAM Journal on Optimization},
    year = {1997},
    volume = {10},
    pages = {43--55}
}

@ARTICLE{mccren00,
    author = {B. D. McCullough and Charles G. Renfro},
    title = {Some Numerical Aspects of Nonlinear Estimation},
    journal = {Journal of Economic and Social Measurement},
    year = {2000},
    volume = {26},
    number = {1},
    pages = {63--77}
}

@incollection{bdm04,
title = {Some Details of Nonlinear Estimation},
author = {McCullough, B. D.},
editor = {Altman, Micah and Gill, Jeff and McDonald, Michael P.},
publisher = {John Wiley \& Sons, Inc.},
chapter ={8},
pages = {199--218},
booktitle = {Numerical Issues in Statistical Computing for the Social Scientist},
year = {2004},
}


@MISC{plato,
author = {H. Mittelman},
year = {2008}, 
title = {Decision Tree for Optimization Software},
url = {http://plato.asu.edu/guide.html}
}

@book{cnm79,
author = {John C. Nash},
year = 1979,
title = {Compact Numerical Methods for Computers: Linear Algebra and Function 
         Minimisation},
address = {Bristol},
publisher = {Adam Hilger},
note = {Second Edition, 1990, Bristol: Institute of Physics Publications.}
}

@book{ jnmws87,
author = {John C. Nash and Mary Walker-Smith},
title = {{Nonlinear Parameter Estimation: An Integrated System in BASIC}},
year = {1987},
address = {New York},
publisher = {Marcel Dekker},
note = {See \url{http://www.nashinfo.com/nlpe.htm} for an expanded downloadable version.}
}


@MISC{Powell98,
author = {Powell,M. J. D.},
title = {Direct search algorithms for optimization calculations},
journal = {Acta Numerica},
volume = {7},
issn = {1474-0508},
pages = {287--336},
numpages = {50},
doi = {10.1017/S0962492900002841},
URL = {http://dx.doi.org/10.1017/S0962492900002841},
eprint = {http://journals.cambridge.org/article\_S0962492900002841},
}



@article{Powell02,
    author = {M. J. D. Powell},
    issn = {0025-5610},
    journal = {Mathematical Programming},
    keywords = {approximation},
    month = {May},
    number = {3},
    pages = {555--582},
    posted-at = {2010-08-31 04:22:15},
    priority = {2},
    publisher = {Springer Berlin / Heidelberg},
    title = {UOBYQA: unconstrained optimization by quadratic approximation},
    url = {http://dx.doi.org/10.1007/s101070100290},
    volume = {92},
    year = {2002}
}

@article{Powell06,
        Author = {M. J. D. Powell},
        Date-Added = {2008-11-26 00:45:42 +0100},
        Date-Modified = {2008-11-26 00:52:47 +0100},
        Journal = {Large Scale Nonlinear Optimization},
        Pages = {255--297},
        Title = {The {NEWUOA} software for unconstrained optimization without derivatives},
        Year = {2006}}


@article{Powell07,
author = {Powell, M. J. D.}, 
title = {{Developments of NEWUOA for Minimization Without Derivatives}}, 
volume = {28}, 
number = {4}, 
pages = {649-664}, 
year = {2008}, 
journal = {IMA Journal of Numerical Analysis}, 
}

@misc{Powell09,
    author = {Powell, M. J. D.},
    month = aug,
    title = {{The BOBYQA algorithm for bound constrained optimization without derivatives}},
    url  =  {http://www.damtp.cam.ac.uk/user/na/NA\_papers/NA2009\_06.pdf},
    year = {2009}
}

@book{Price05,
author = {K. V. Price and R. M. Storn and J. A. Lampinen},
year = {2005},
title = {Differential Evolution - A Practical Approach to Global Optimization},
address = {New York},
publisher = {Springer}
}

@article{Price77,
  author    = {Wyn L. Price},
  title     = {A Controlled Random Search Procedure for Global Optimisation},
  journal   = {Computer Journal},
  volume    = {20},
  number    = {4},
  year      = {1977},
  pages     = {367-370},
  bibsource = {DBLP, http://dblp.uni-trier.de}
}

@Book{Ratkowsky83,
    author = {David A. Ratkowsky},
    title = {Nonlinear Regression Modeling: A Unified Practical Approach},
    year = {1983},
    publisher = {Marcel Dekker Inc.},
    address = {New York and Basel}
}
    
@Manual{Rcite,
    title = {{R}: A Language and Environment for Statistical Computing},
    author = {{R Development Core Team}},
    organization = {R Foundation for Statistical Computing},
    address = {Vienna, Austria},
    year = {2008},
    note = {{ISBN} 3-900051-07-0},
    url = {http://www.R-project.org},
}

@MISC{stata,
author = {StataCorp},
year = 2009,
title = {Stata Statistical Software: Release 11},
address = {College Station, TX},
publisher= {StataCorp LP}
}

@MISC{genstat,
author = {R.W. Payne and D.A. Murray and S.A. Harding and
  D.B. Baird and  D.M. Soutar},
year = 2009,
title = {GenStat for Windows (12th Edition) Introduction},
publisher = {VSN International}, 
address = {Hemel Hempstead}
}

@BOOK{SAS,
author = {various},
title = {SAS},
publisher = {SAS Institute Inc.},
address = {Cary, NC}
}

@BOOK{Maple10,
author = {Michael B.~Monagan and Keith O.~Geddes and K.~Michael Heal
and George Labahn and Stefan M.~Vorkoetter and James McCarron and Paul DeMarco},
title = {Maple~10 Programming Guide},
publisher = {Maplesoft}, 
year = {2005},
address = {Waterloo ON, Canada},
} 

@BOOK{Mathematica4,
author = {Stephen Wolfram},
title = {The Mathematica Book},
publisher = {Wolfram Research Inc.},
year = {2000}
}


@Article{Schnabel85,
  author =       "Robert B. Schnabel and John E. Koontz and Barry E. Weiss",
  title =        "A Modular System of Algorithms for Unconstrained Minimization",
  journal =      {ACM Transactions on Mathematical Software},
  volume =       "11",
  number =       "4",
  pages =        "419--440",
  month =        dec,
  year =         "1985"
}


@Article{Bioc04,
    author = {Robert C Gentleman and Vincent J. Carey and Douglas M. Bates and {others}},
    title = {Bioconductor: Open Software Development for Computational Biology and 
              Bioinformatics},
    journal = {Genome Biology},
    volume = {5},
    year = {2004},
    pages = {R80},
    url = {http://genomebiology.com/2004/5/10/R80},
}

@Manual{p-Rcgmin,
    title = {{\pkg{Rcgmin}}: Conjugate Gradient Minimization of Nonlinear 
	Functions with Box Constraints},
    author = {John C. Nash},
    organization = {Nash Information Services Inc.}, 
    year = {2011},
    note = {R package version 2011-2.10},
  }

@Manual{p-optimx,
    title = {\pkg{optimx}: A Replacement and Extension of the {optim()} function},
    author = {John C Nash and Ravi Varadhan},
    organization = {Nash Information Services Inc. and Johns Hopkins University}, 
    year = {2011},
    note = {R package version 2011-3.5},
  }

@Manual{p-Rvmmin,
    title = {{\pkg{Rvmmin}}: Variable Metric Nonlinear Function Minimization 
	with Bounds Constraints},
    author = {John C. Nash},
    organization = {Nash Information Services Inc.}, 
    year = {2011},
    note = {R package version 2011-2.25},
  }


@Article{p-BB,
    title = {{\pkg{BB}}: An {\R} Package for Solving a Large System of 
                     Nonlinear Equations and for Optimizing a High-Dimensional 
                     Nonlinear Objective Function},
    author = {Ravi Varadhan and Paul Gilbert},
    journal = {Journal of Statistical Software},
    year = {2009},
    volume = {32},
    number = {4},
    pages = {1--26},
    url = {http://www.jstatsoft.org/v32/i04/},
}

@ARTICLE{Vara09,
    title = {{BB}: An {\R} Package for Solving a Large System of 
      Nonlinear Equations and for Optimizing a High-Dimensional Nonlinear Objective Function},
    author = {Ravi Varadhan and Paul Gilbert},
    journal = {Journal of Statistical Software},
    year = {2009},
    volume = {32},
    number = {4},
    pages = {1--26},
    url = {http://www.jstatsoft.org/v32/i04/},
}


@Manual{p-minqa,
    title = {\pkg{minqa}: Derivative-Free Optimization Algorithms by Quadratic
              Approximation},
    author = {Douglas Bates and Katharine M. Mullen and John C. Nash and Ravi Varadhan},
    year = {2010},
    note = {R package version 1.1.13},
    organization = {R Foundation for Statistical Computing},
    url = {http://CRAN.R-project.org/package=minqa},
  }

@Manual{p-numDeriv,
    title = {\pkg{numDeriv}: Accurate Numerical Derivatives},
    author = {Paul Gilbert},
    year = {2009},
    note = {R package version 2009.2-1},
    organization = {R Foundation for Statistical Computing},
    url = {http://www.bank-banque-canada.ca/pgilbert},
}

@article{BatesWatts81,
author = {Bates, Douglas M. and Watts, Donald G.},
title = {A Relative Off set Orthogonality Convergence Criterion for Nonlinear least Squares},
journal = {Technometrics},
volume = {23},
number = {2},
pages = {179-183},
year = {1981}
}



@book{bateswatts,
	author = "D. M. Bates and D. G. Watts", 
	year = 1988,
	title = "Nonlinear Regression Analysis and Its Applications", 
	publisher = "Wiley"
}

@book{gillmurraywright,
	author = "P. E.~Gill and W.~Murray and M. H.~Wright", 
	year = 1981,
	title = "Practical Optimization", 
	publisher = "Academic Press"
}


@Manual{p-dfoptim,
    title = {dfoptim: Derivative-free Optimization},
    author = {Ravi Varadhan and Hans W. Borchers},
    organization = {Johns Hopkins University and 
              ABB Corporate Research.},
    year = {2011},
    note = {R package version 2011.12-9},
    url = {http://CRAN.R-project.org/package=dfoptim},
  }


@Book{jncnm79,
  catalogue-url	= { http://nla.gov.au/nla.cat-vn1060620 },
  isbn		= { 0852743300 },
  language	= { English },
  life-dates	= { 1979 - },
  publisher	= { Hilger, Bristol : },
  subjects	= { Numerical analysis - Data processing. },
  type		= { Book },
  author	= {Nash, J. C.},
  title		= { Compact numerical methods for computers : linear algebra
		  and function minimisation},
  pages		= { ix, 227 p. : },
  year		= {1979 }
}

@Book{acton70,
    AUTHOR    = "Forman S. Acton",
    TITLE     = "Numerical Methods that Work",
    PUBLISHER = "Harper and Row",
    ADDRESS   = {New York},
    YEAR      = {1970}
}

@Book{brent73,
    AUTHOR    = {Brent, R.},
    TITLE     = {Algorithms for Minimization without Derivatives},
    PUBLISHER = {Prentice-Hall},
    ADDRESS   = {Englewood Cliffs, NJ},
    YEAR      = {1973}
}

@Book{DenSchnab83,
     AUTHOR = {Dennis, J. E. and Schnabel, R. B.},
     YEAR   = {1983},
     TITLE  = {Numerical Methods for Unconstrained Optimization and Nonlinear Equations},
     PUBLISHER = "Prentice-Hall",
     ADDRESS   = {Englewood Cliffs, NJ}
} 

@article{Zhu1997LBFGS,
 author = {Zhu, Ciyou and Byrd, Richard H. and Lu, Peihuang and Nocedal, Jorge},
 title = {Algorithm 778: L-BFGS-B: Fortran subroutines for large-scale bound-constrained optimization},
 journal = {ACM Trans. Math. Softw.},
 issue_date = {Dec. 1997},
 volume = {23},
 number = {4},
 month = dec,
 year = {1997},
 issn = {0098-3500},
 pages = {550--560},
 numpages = {11},
 url = {http://doi.acm.org/10.1145/279232.279236},
 doi = {10.1145/279232.279236},
 acmid = {279236},
 publisher = {ACM},
 address = {New York, NY, USA},
 keywords = {large-scale optimization, limited-memory method, nonlinear optimization, variable metric method},
} 

@ARTICLE{Lu94alimited-memory,
    author = {Peihuang Lu and Jorge Nocedal and Ciyou Zhu and Richard H. Byrd and Richard H. Byrd},
    title = {A Limited-Memory Algorithm for Bound Constrained Optimization},
    journal = {SIAM Journal on Scientific Computing},
    year = {1994},
    volume = {16},
    pages = {1190--1208}
}

@article{Schnabel1985,
 author = {Schnabel, Robert B. and Koonatz, John E. and Weiss, Barry E.},
 title = {A modular system of algorithms for unconstrained minimization},
 journal = {ACM Trans. Math. Softw.},
 issue_date = {Dec. 1985},
 volume = {11},
 number = {4},
 month = dec,
 year = {1985},
 issn = {0098-3500},
 pages = {419--440},
 numpages = {22},
 url = {http://doi.acm.org/10.1145/6187.6192},
 doi = {10.1145/6187.6192},
 acmid = {6192},
 publisher = {ACM},
 address = {New York, NY, USA},
} 

@article{Cauchy1848,
author ={Cauchy, A.},
year =  {1848},
title = {Méthode générale pour la resolution des systémes d’équations simultanées},
journal = {C. R. Acad. Sci.}, 
address = {Paris},
volume = {27},
pages = {536-8}
}

@inproceedings{ jn1987termin,
    title = {Termination strategies for nonlinear parameter determination},
    booktitle = {Proceedings of the Australian Society for Operations Research Annual Conference},
    author = {John C. Nash},
    editor = {Santosh Kumar},
    year = {1987},
    month = {October},
    pages = {322 -- 334},
    address = {Melbourne, Australia}
}

@inproceedings{ jnCTAC87,
   title = {Function minimization on small or special computers},
   author = {John C. Nash},
   booktitle = {Computational Techniques and Applications: CTAC-87},
   editor = {Noye, J. and Fletcher, C.}, 
   address = {Amsterdam},
   publisher= {Elsevier Science Publishers}, 
   pages = {509--516},
   year = {1988}
} 

@ARTICLE{Torczon95patternsearch,
    author = {Virginia Torczon}, 
    title = {Pattern Search Methods for Nonlinear Optimization},
    journal = {SIAG/OPT Views and News},
    year = {1995},
    volume = {6},
    pages = {7--11}
}

@Article{ NelderMead65,
  author =       {J. A. Nelder and R. Mead},
  title =        {A Simplex Method for Function Minimization},
  journal =      {Computer Journal},
  volume =       {7},
  number =       {4},
  pages =        {308--313},
  month =        {January},
  year =         {1965}
}

@Article{Fox1978PORT,
  author =       "P. A. Fox and A. D. Hall and N. L. Schryer",
  title =        "The {PORT} Mathematical Subroutine Library",
  journal =      "ACM Transactions on Mathematical Software (TOMS)",
  volume =       "4",
  number =       "2",
  pages =        "104--126",
  month =        jun,
  year =         "1978"
}

@Article{Rosenbrock60,
   author = {Rosenbrock, H. H.},
   year   = {1960}, 
   title  = {An automatic method for finding the greatest or least value of a function},
   journal = {The Computer Journal},
   volume  = {3},
   pages   = {175–184}
}

@book{dixon1972nonlinear,
  title={Nonlinear optimisation},
  author={Dixon, L.C.W.},
  year={1972},
  publisher={The English Universities Press Ltd.},
  address = {London}
}

@article{Dai01,
  author    = {Y. H. Dai and Y. Yuan},
  title     = {An Efficient Hybrid Conjugate Gradient Method for Unconstrained
               Optimization},
  journal   = {Annals of Operations Research},
  volume    = {103},
  number    = {1-4},
  year      = {2001},
  pages     = {33-47},
  ee        = {http://dx.doi.org/10.1023/A:1012930416777},
  bibsource = {DBLP, http://dblp.uni-trier.de}
}

@ARTICLE{Birgin01spg,
    author = {Ernesto G. Birgin and Mart'inez Marcos Raydan},
    title = {SPG: Software for convex-constrained optimization},
    journal = {ACM Transactions on Mathematical Software},
    year = {2001},
    volume = {27},
    pages = {340--349}
}

@article{Eugster2011,
  author = {Manuel J. A. Eugster and Friedrich Leisch},
  title = {Exploratory Analysis of Benchmark Experiments -- An
                  Interactive Approach},
  journal = {Computational Statistics},
  year = {2011},
  volume = {26},
  number = {4},
  pages = {699--710},
  preprinturl = {http://epub.ub.uni-muenchen.de/10604/},
  doi = {10.1007/s00180-010-0227-z}
}

@article{Eugster2012,
  author = {Manuel J. A. Eugster and Torsten Hothorn and
                  Friedrich Leisch},
  title = {Domain-Based Benchmark Experiments: Exploratory and
                  Inferential Analysis},
  journal = {Austrian Journal of Statistics},
  year = 2012,
  volume = 41,
  number = 1,
  pages = {5--26},
  url = {http://www.stat.tugraz.at/AJS/ausg121/121Leisch.pdf}
}

@Manual{minpack.lm,
    title = {minpack.lm: R interface to the Levenberg-Marquardt nonlinear least-squares
algorithm found in MINPACK, plus support for bounds},
    author = {Katharine M. Mullen and Timur V. Elzhov and Ben Bolker},
    note = {R package version 1.1-6},
    year = 2012
}

@TechReport{ Nielsen2000,
    author       = "H. B. Nielsen",
    title        = "{UCMINF} - an Algorithm for Unconstrained, Nonlinear Optimization",
    year         = "2000",
    month        = "dec",
    pages        = "24",
    number       = "",
    series       = "",
    institution  = "{ Department of Mathematical Modelling, Technical University of Denmark.}",
    address      = "",
    type         = "",
    note         = {Report IMM-REP-2000-18},
    url          = {http://www2.imm.dtu.dk/~hbn/publ/TR0019.ps}
}
 
@Article{Hager2006,
  author =       {William W. Hager and Hongchao Zhang},
  title =        "{Algorithm 851}: {CG\_DESCENT}, a conjugate gradient
                 method with guaranteed descent",
  journal =      {ACM Transactions on Mathematical Software},
  volume =       "32",
  number =       "1",
  pages =        "113--137",
  month =        mar,
  year =         "2006",
  fjournal =     "ACM Transactions on Mathematical Software (TOMS)"
}

@book{Conn2009,
 author = {Conn, Andrew R. and Scheinberg, Katya and Vicente, Luis N.},
 title = {Introduction to Derivative-Free Optimization},
 year = {2009},
 isbn = {0898716683, 9780898716689},
 publisher = {Society for Industrial and Applied Mathematics},
 address = {Philadelphia, PA, USA},
} 

@article{Geradin71,
  author = {Geradin, M.},
  year = {1971},
  title = {The computational efficiency of a new minimization algorithm for eigenvalue analysis},
  journal = {J. Sound Vib.},
  volume = {19},
  pages = {319--331}
}

@Article{    nashderive95,
  month    = {February},
  author  = {Nash, John C.},
  title    = {Computer algebra systems: DERIVE},
  journal  = {The American Statistician},
  volume  = {49},
  number  = {1},
  pages    = {93-99},
  note ={JNFile: ??},
  year    = {1995}
}