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Source: r-cran-phytools
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders: Andreas Tille <tille@debian.org>
Section: gnu-r
Testsuite: autopkgtest-pkg-r
Priority: optional
Build-Depends: debhelper (>= 11~),
dh-r,
r-base-dev,
r-cran-ape (>= 4.0),
r-cran-maps,
r-cran-animation,
r-cran-clustergeneration,
r-cran-coda,
r-cran-combinat,
r-cran-expm,
r-cran-mass,
r-cran-mnormt,
r-cran-nlme,
r-cran-numderiv,
r-cran-phangorn (>= 2.3.1),
r-cran-plotrix,
r-cran-scatterplot3d
Standards-Version: 4.2.1
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-cran-phytools
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-cran-phytools.git
Homepage: https://cran.r-project.org/package=phytools
Package: r-cran-phytools
Architecture: all
Depends: ${R:Depends},
${misc:Depends}
Recommends: ${R:Recommends}
Suggests: ${R:Suggests}
Description: GNU R phylogenetic tools for comparative biology
A wide range of functions for phylogenetic analysis. Functionality is
concentrated in phylogenetic comparative biology, but also includes a
diverse array of methods for visualizing, manipulating, reading or
writing, and even inferring phylogenetic trees and data. Included among
the functions in phylogenetic comparative biology are various for
ancestral state reconstruction, model-fitting, simulation of phylogenies
and data, and multivariate analysis. There are a broad range of plotting
methods for phylogenies and comparative data which include, but are not
restricted to, methods for mapping trait evolution on trees, for
projecting trees into phenotypic space or a geographic map, and for
visualizing correlated speciation between trees. Finally, there are a
number of functions for reading, writing, analyzing, inferring,
simulating, and manipulating phylogenetic trees and comparative data not
covered by other packages. For instance, there are functions for
randomly or non-randomly attaching species or clades to a phylogeny, for
estimating supertrees or consensus phylogenies from a set, for
simulating trees and phylogenetic data under a range of models, and for
a wide variety of other manipulations and analyses that phylogenetic
biologists might find useful in their research.
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