1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
|
\name{plotTree.datamatrix}
\alias{plotTree.datamatrix}
\title{Plot a tree with a discrete character data matrix at the tips}
\usage{
plotTree.datamatrix(tree, X, ...)
}
\arguments{
\item{tree}{an object of class \code{"phylo"}.}
\item{X}{a data frame with columns as factors.}
\item{...}{optional arguments.}
}
\description{
Function plots a phylogeny next to a matrix of discrete character data.
}
\value{
Invisibly returns a list containing the font size, a list of the colors used for each column of the plotted data matrix, and the x-coordinate of the rightmost edge of the matrix.
}
\references{
Revell, L. J. (2012) phytools: An R package for phylogenetic comparative biology (and other things). \emph{Methods Ecol. Evol.}, \bold{3}, 217-223.
}
\author{Liam Revell \email{liam.revell@umb.edu}}
\seealso{
\code{\link{dotTree}}, \code{\link{phylo.heatmap}}
}
\keyword{phylogenetics}
\keyword{plotting}
\keyword{comparative method}
|
