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#' Assign missing categories to "unknown"
#'
#' `step_unknown` creates a *specification* of a recipe
#' step that will assign a missing value in a factor level to"unknown".
#'
#' @inheritParams step_center
#' @inherit step_center return
#' @param ... One or more selector functions to choose which
#' variables that will be affected by the step. These variables
#' should be character or factor types. See [selections()] for more
#' details. For the `tidy` method, these are not currently used.
#' @param role Not used by this step since no new variables are
#' created.
#' @param new_level A single character value that will be assigned
#' to new factor levels.
#' @param objects A list of objects that contain the information
#' on factor levels that will be determined by [prep.recipe()].
#' @return An updated version of `recipe` with the new step
#' added to the sequence of existing steps (if any). For the
#' `tidy` method, a tibble with columns `terms` (the
#' columns that will be affected) and `value` (the factor
#' levels that is used for the new value)
#' @keywords datagen
#' @concept preprocessing
#' @concept factors
#' @export
#' @details The selected variables are adjusted to have a new
#' level (given by `new_level`) that is placed in the last
#' position.
#'
#' Note that if the original columns are character, they will be
#' converted to factors by this step.
#'
#' If `new_level` is already in the data given to `prep`, an error
#' is thrown.
#'
#' @seealso [step_factor2string()], [step_string2factor()],
#' [dummy_names()], [step_regex()], [step_count()],
#' [step_ordinalscore()], [step_unorder()], [step_other()], [step_novel()]
#' @examples
#' library(modeldata)
#' data(okc)
#'
#' rec <-
#' recipe(~ diet + location, data = okc) %>%
#' step_unknown(diet, new_level = "unknown diet") %>%
#' step_unknown(location, new_level = "unknown location") %>%
#' prep()
#'
#' table(bake(rec, new_data = NULL) %>% pull(diet),
#' okc %>% pull(diet),
#' useNA = "always") %>%
#' as.data.frame() %>%
#' dplyr::filter(Freq > 0)
#'
#' tidy(rec, number = 1)
step_unknown <-
function(recipe,
...,
role = NA,
trained = FALSE,
new_level = "unknown",
objects = NULL,
skip = FALSE,
id = rand_id("unknown")) {
add_step(
recipe,
step_unknown_new(
terms = ellipse_check(...),
role = role,
trained = trained,
new_level = new_level,
objects = objects,
skip = skip,
id = id
)
)
}
step_unknown_new <-
function(terms, role, trained, new_level, objects, skip, id) {
step(
subclass = "unknown",
terms = terms,
role = role,
trained = trained,
new_level = new_level,
objects = objects,
skip = skip,
id = id
)
}
#' @export
prep.step_unknown <- function(x, training, info = NULL, ...) {
col_names <- eval_select_recipes(x$terms, training, info)
col_check <- dplyr::filter(info, variable %in% col_names)
if (any(col_check$type != "nominal"))
rlang::abort(
paste0(
"Columns must be character or factor: ",
paste0(col_check$variable[col_check$type != "nominal"],
collapse = ", ")
)
)
# Get existing levels and their factor type (i.e. ordered)
objects <- lapply(training[, col_names], get_existing_values)
# Check to make sure that there are not duplicate levels
level_check <-
map_lgl(objects, function(x, y) y %in% x, y = x$new_level)
if (any(level_check))
rlang::abort(
paste0(
"Columns already contain a level '", x$new_level, "': ",
paste0(names(level_check)[level_check], collapse = ", ")
)
)
step_unknown_new(
terms = x$terms,
role = x$role,
trained = TRUE,
new_level = x$new_level,
objects = objects,
skip = x$skip,
id = x$id
)
}
#' @export
bake.step_unknown <- function(object, new_data, ...) {
for (i in names(object$objects)) {
new_data[[i]] <-
ifelse(is.na(new_data[[i]]), object$new_level, as.character(new_data[[i]]))
new_data[[i]] <-
factor(new_data[[i]],
levels = c(object$object[[i]], object$new_level),
ordered = attributes(object$object[[i]])$is_ordered)
}
if (!is_tibble(new_data)) {
new_data <- as_tibble(new_data)
}
new_data
}
print.step_unknown <-
function(x, width = max(20, options()$width - 30), ...) {
cat("Unknown factor level assignment for ", sep = "")
printer(names(x$objects), x$terms, x$trained, width = width)
invisible(x)
}
#' @rdname step_unknown
#' @param x A `step_unknown` object.
#' @export
tidy.step_unknown <- function(x, ...) {
if (is_trained(x)) {
res <- tibble(terms = names(x$objects),
value = rep(x$new_level, length(x$objects)))
} else {
term_names <- sel2char(x$terms)
res <- tibble(terms = term_names,
value = rep(x$new_level, length(term_names)))
}
res$id <- x$id
res
}
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