1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
|
ec305475fd716447e866235efe97efdf *DESCRIPTION
41ba68f62ff5f58f05f96a0dbd08b282 *LICENSE
06d664adfd9fbca93f72d9400ff8280f *NAMESPACE
0869ad8f281eaa4cd87e616a81377a16 *NEWS.md
aa0c5512f4964c3b6d85e395c963e589 *R/api-collections.R
86061c453d64643efc0cbe908effd59d *R/api-studies.R
b3a6b05fc5aa2e15408b2da1e6331dcc *R/api-taxonomy.R
1a7c38aa3ccd21261bcb76e2a871cb12 *R/api-tnrs.R
ec27ba53ea6d782485cc3da48804e936 *R/api-tol.R
39209af4d1ef86c2b7003bcf1cfef639 *R/base.R
58ac44eb552c57b7b5ad996a340864f9 *R/deduplicate_labels.R
c282a05519f66d3c1cb9bf86041e6202 *R/external_data.R
0606c16b6ddaac8e75772c87909d38b5 *R/is_in_tree.R
3878617ce289c163bb45f85f12b1e47c *R/match_names.R
9b6e56ea7e296aadd1c89c6ee15fa01a *R/methods.R
38a3246a6b7b0ff9dfad2abacba2bc84 *R/rotl-package.R
de7acd61a314eb507424e45d12d6a4ba *R/studies-methods.R
451a2522c0cbdb4b560dd2801c289112 *R/studies-utils.R
6ca18cc6014921deeb169a55f23f5da7 *R/studies.R
d89b501ece90eab10dd2fb8d7232caa3 *R/tax_utils.R
e2239b34e81f1283d38f7048c9716354 *R/taxonomy.R
72f6609bc4b83f3e2fbe8cf3fc9f3351 *R/tnrs.R
3f5e979268b038b823b78f01c6abd2ed *R/tol.R
ad3ff267fb90ff6fd2dff89df96ce91d *R/tree_to_labels.R
b5ff4845bb30a4f13128968802bd436f *R/utils.R
9ba1c74da041efe8528dd6c2c79e6137 *README.md
91e5a71b838768a89938ce2acfa3d16a *build/vignette.rds
1ea5dccec217a81c69bc033902ee7688 *inst/CITATION
643e6a562398c7fd554903af46d44551 *inst/doc/data_mashups.Rmd
c5ab3a323694b0a3d19c49b5481780d6 *inst/doc/data_mashups.html
6c355aec829932b83271e6aa205029cc *inst/doc/meta-analysis.Rmd
3f4fd4a101f1298bfa7836191f0c4946 *inst/doc/meta-analysis.html
e8d7c6b7f750c816a25e2ab76d2147c7 *inst/doc/rotl.Rmd
6346090ebcf73cfe1bde5f9f6ec4b645 *inst/doc/rotl.html
09d93b49b2b38f2495761ea86e134006 *inst/extdata/egg.csv
d27a70b4799cd0a916da68498ce7c206 *inst/extdata/mcmcglmm_model.rds
5e5eb20ee387ba7192c62e629a3383f2 *inst/extdata/protist_mutation_rates.csv
92d945e47e67be085ec743a29553ea52 *man/figures/logo.svg
a4362ce73d3fe17b67f91d2ee52a790e *man/get_study.Rd
b654bc4538a5013c88484e2a5c9e2293 *man/get_study_meta.Rd
9fca983d47fba5ba13677709195e04ba *man/get_study_subtree.Rd
591828cdbe98fa325027c8e29a811c2c *man/get_study_tree.Rd
7376b3c8fbc5c5d83c06e9c2756fbb35 *man/is_in_tree.Rd
8572338a55159b4b45eea44191cbc82f *man/list_trees.Rd
e0386442684f2019f009dbd9dc75b9b3 *man/match_names-methods.Rd
86f892122bec47b0709f53c7478c55ab *man/match_names.Rd
fc9e98197bdbfa71307efcaab8f0de92 *man/rotl.Rd
ea8938c2220f0b358930fbaa9b9af738 *man/source_list.Rd
216476335bfc2e2662b67e1f074d12d2 *man/strip_ott_ids.Rd
23971a71f7542c37d227907fa53a6cb2 *man/studies_find_studies.Rd
ed222b203dc9608d285cf8ef2d0ca28e *man/studies_find_trees.Rd
b52b8d1f1701bf1d7d1b4549d56ccc90 *man/studies_properties.Rd
53b91ea154206361b51b7009446151d5 *man/study_external_IDs.Rd
ed749cd0a9f5e22fe03fbf6ad5b62f43 *man/synonyms.match_names.Rd
ccb54bd7485bddbe4ee59b4e117a0b21 *man/tax_lineage.Rd
db9ed55536b7db87701316de1e5d4493 *man/taxon_external_IDs.Rd
5f58b0e589b08000432acb5656fc2be2 *man/taxonomy-methods.Rd
3e0efd88ff66012d6eadaea7c5606aa4 *man/taxonomy_about.Rd
5fa0e3a349e2d596e24ce621c567497b *man/taxonomy_mrca.Rd
d88231d5e8ce638516cb08a0c7a143f4 *man/taxonomy_subtree.Rd
d50ea7664ac97dc3be5e5406b123237c *man/taxonomy_taxon_info.Rd
c01395cc8ca421b4e607c110fd714a53 *man/tnrs_contexts.Rd
a16c0de937a7de364fbff3a7e1581c44 *man/tnrs_infer_context.Rd
505e5385efa0a7f66806944ec3562979 *man/tnrs_match_names.Rd
db8559db3dca752ad574fe17d83632b7 *man/tol_about.Rd
e03f7ad6f93233aec8d33d2c2ad413b1 *man/tol_induced_subtree.Rd
a92008e4f20d8a4dfcaf1a7bb9c8e22b *man/tol_mrca.Rd
5ccd760e0ce2e82d71d4dc0935048d2b *man/tol_node_info.Rd
ca675fcf48a69da215dd88bf3a6a8c0b *man/tol_subtree.Rd
2e5f11fd503ac9afd3daeada3fec43ec *tests/test-all.R
5b611ae9eae9a69fd1cafffe4e925de1 *tests/testthat/test-API.R
847fbfea80d45a1a998d6c16eda0502a *tests/testthat/test-api-studies.R
dbdaeaa0e8aac809ed49ae0ca436ad77 *tests/testthat/test-api-taxonomy.R
02e21c42744195ba63bcaaefc86c5375 *tests/testthat/test-api-tnrs.R
9bf4fff54c13e1931a77faa40c9e32fe *tests/testthat/test-api-tol.R
eefbe86daadd328ef5837146060dce9d *tests/testthat/test-base.R
b6b8b458e2e877cd627dedbfb6f7da67 *tests/testthat/test-deduplicate_labels.R
edeafd20624754a030aea18c87a31a3e *tests/testthat/test-external.R
c6aebf00170ade5a4572ec53a0e71db0 *tests/testthat/test-match_names.R
0c807fdb420f96c40bc09a5d561c5b2d *tests/testthat/test-studies.R
8eefc6855139bdf7511a70470c057122 *tests/testthat/test-taxonomy.R
b06a334ee5e9ca61992453c8fec5d4f6 *tests/testthat/test-tnrs.R
f4167dc0933dbc3ef1406a2f3f5e3339 *tests/testthat/test-tol.R
538d0e358c91e50b80fd1cc51233ffea *tests/testthat/test-tree_to_labels.R
fb4b19651907e0fdb26e6f4c0581af83 *tests/tree_of_life.json
643e6a562398c7fd554903af46d44551 *vignettes/data_mashups.Rmd
1e442403d805c8f8fe0473056e090a67 *vignettes/data_mashups.Rmd.orig
95852b1cc8e140d1b41ef84643b17063 *vignettes/fig-vignettes-birds_in_a_tree-1.png
0713a527e78457ed92f56b121477972f *vignettes/fig-vignettes-eggs_in_a_funnel-1.png
26acdb5e5a5d97b009b2c15ffc490c29 *vignettes/fig-vignettes-subtree-1.png
3001085b123e24bd037666dc94b8e8c1 *vignettes/fig-vignettes-unnamed-chunk-1-1.png
b14afdded7129cab5231bea6e55deff3 *vignettes/fig-vignettes-unnamed-chunk-16-1.png
8d595d8d7769c3e17cff2e6fdd4886b0 *vignettes/fig-vignettes-unnamed-chunk-3-1.png
120f6a75b4b55813f8232de4aace10ee *vignettes/fig-vignettes-unnamed-chunk-8-1.png
6c355aec829932b83271e6aa205029cc *vignettes/meta-analysis.Rmd
43115aed8b4fdac25a06760851d0fe76 *vignettes/meta-analysis.Rmd.orig
e8d7c6b7f750c816a25e2ab76d2147c7 *vignettes/rotl.Rmd
fa8ac9390987ec33a882c3573d48749b *vignettes/rotl.Rmd.orig
da8cb33974fa673158fea8ccf2d8bbac *vignettes/vignette.css
|
