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#' @importFrom sjmisc add_variables
plot_type_est <- function(type,
ci.lvl,
se,
tf,
model,
terms,
group.terms,
rm.terms,
sort.est,
title,
axis.title,
axis.labels,
axis.lim,
grid.breaks,
show.intercept,
show.values,
show.p,
value.offset,
digits,
geom.colors,
geom.size,
line.size,
order.terms,
vline.color,
value.size,
bpe,
bpe.style,
bpe.color,
facets,
show.zeroinf,
p.threshold,
p.val,
vcov.fun,
vcov.type,
vcov.args,
ci.style,
p_adjust,
std.response,
...) {
if (missing(facets)) facets <- TRUE
# get tidy output of summary ----
if (type == "std" || type == "std2") {
std_method <- switch(type, "std" = "refit", "std2" = "2sd", "refit")
} else {
std_method <- FALSE
}
dat <-
tidy_model(
model = model,
ci.lvl = ci.lvl,
tf = tf,
type = type,
bpe = bpe,
robust = list(vcov.fun = vcov.fun, vcov.type = vcov.type, vcov.args = vcov.args),
facets = facets,
show.zeroinf = show.zeroinf,
p.val = p.val,
standardize = std_method,
bootstrap = FALSE,
iterations = 1000,
seed = NULL,
p_adjust = p_adjust,
std.response = std.response,
...
)
# fix brms coefficient names
if (inherits(model, "brmsfit")) {
dat$term <- gsub("^b_", "", dat$term)
}
# check if facet groups need to be replaced with title
if (length(title) > 1) {
tnames <- names(title)
if (obj_has_name(dat, "facet") && !is.null(tnames)) {
if (all(tnames %in% dat$facet)) {
for (i in tnames) {
dat$facet[which(dat$facet == i)] <- title[i]
}
title <- ""
}
}
if (obj_has_name(dat, "response.level") && !is.null(tnames)) {
if (all(tnames %in% dat$response.level)) {
for (i in tnames) {
dat$response.level[which(dat$response.level == i)] <- title[i]
}
title <- ""
}
}
}
# se needs to be logical from here on
if (!is.null(se) && !is.logical(se)) se <- TRUE
# for stan-models, we can define the style of the Bayesian point estimate,
# which may be a line or a dot.
if (missing(bpe.style) || is.null(bpe.style)) bpe.style <- "line"
if (missing(value.size) || is.null(value.size)) value.size <- 4
plot_model_estimates(
model = model,
dat = dat,
tf = tf,
se = se,
terms = terms,
group.terms = group.terms,
rm.terms = rm.terms,
sort.est = sort.est,
title = title,
axis.title = axis.title,
axis.labels = axis.labels,
axis.lim = axis.lim,
grid.breaks = grid.breaks,
show.intercept = show.intercept,
show.values = show.values,
show.p = show.p,
value.offset = value.offset,
digits = digits,
geom.colors = geom.colors,
geom.size = geom.size,
line.size = line.size,
bpe.style = bpe.style,
bpe.color = bpe.color,
term.order = order.terms,
vline.color = vline.color,
value.size = value.size,
facets = facets,
p.threshold = p.threshold,
ci.style = ci.style,
...
)
}
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