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\name{output.binding.results}
\alias{output.binding.results}
%- Also NEED an '\alias' for EACH other topic documented here.
\title{ Write out determined binding peaks into a text file table }
\description{
Writes out determined binding positions into a text file. The file
will contain a table with each row corresponding to a detected
position, with the following columns
\itemize{
\item{chr: }{ chromosome or target sequence}
\item{pos: }{ position of detected binding site on the chromosome/sequence}
\item{score: }{ a score reflecting magnitude of the binding}
\item{Evalue: }{ E-value corresponding to the peak magnitude}
\item{FDR: }{ FDR corresponding to the peak magnitude}
\item{enrichment.lb: }{ lower bound of the fold-enrichment ratio}
\item{enrichment.mle: }{ maximum likelihood estimate of the fold-enrichment ratio}
}
}
\usage{
output.binding.results(results, filename)
}
%- maybe also 'usage' for other objects documented here.
\arguments{
\item{results}{ output of the \code{\link{find.binding.positions}} }
\item{filename}{ file name }
}
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